RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 C3orf84H3BNL1 204 aa14.58□□□□□ -0.08
SREBF1-220ENST00000581707 TMEM50AO95807 157 aa14.58□□□□□ -0.08
SREBF1-220ENST00000581707 SULT1A3P0DMM9 295 aa14.58□□□□□ -0.08
SREBF1-220ENST00000581707 SULT1A4P0DMN0 295 aa14.58□□□□□ -0.08
SREBF1-220ENST00000581707 ANXA3P12429 323 aa14.58□□□□□ -0.08
SREBF1-220ENST00000581707 OPRK1P41145 380 aa14.58□□□□□ -0.08
SREBF1-220ENST00000581707 HTR2BP41595 481 aa14.58□□□□□ -0.08
SREBF1-220ENST00000581707 MUC7Q8TAX7 377 aa14.58□□□□□ -0.08
SREBF1-220ENST00000581707 DEDD2Q8WXF8 326 aa14.58□□□□□ -0.08
SREBF1-220ENST00000581707 CACFD1Q9UGQ2 172 aa14.58□□□□□ -0.08
SREBF1-220ENST00000581707 IGHV7-4-1A0A0J9YVY3 117 aa14.57□□□□□ -0.08
SREBF1-220ENST00000581707 CEBPZOSA8MTT3 80 aa14.57□□□□□ -0.08
SREBF1-220ENST00000581707 MLANAQ16655 118 aa14.57□□□□□ -0.08
SREBF1-220ENST00000581707 TMED4Q7Z7H5 227 aa14.57□□□□□ -0.08
SREBF1-220ENST00000581707 LGI3Q8N145 548 aa14.57□□□□□ -0.08
SREBF1-220ENST00000581707 TMEM116Q8NCL8 245 aa14.57□□□□□ -0.08
SREBF1-220ENST00000581707 RHPN1-AS1Q9BWJ2 59 aa14.57□□□□□ -0.08
SREBF1-220ENST00000581707 FNDC4Q9H6D8 234 aaPredicted RBP14.57□□□□□ -0.08
SREBF1-220ENST00000581707 IGHV3-49A0A0A0MS15 119 aa14.56□□□□□ -0.08
SREBF1-220ENST00000581707 TRAV14DV4A0A0A6YYC5 116 aa14.56□□□□□ -0.08
SREBF1-220ENST00000581707 A0A0B4J2A0 478 aa14.56□□□□□ -0.08
SREBF1-220ENST00000581707 CHEK1O14757 476 aa14.56□□□□□ -0.08
SREBF1-220ENST00000581707 SRPXP78539 464 aa14.56□□□□□ -0.08
SREBF1-220ENST00000581707 TOMM20LQ6UXN7 152 aa14.56□□□□□ -0.08
SREBF1-220ENST00000581707 LYZL2Q7Z4W2 148 aa14.56□□□□□ -0.08
SREBF1-220ENST00000581707 RNF2Q99496 336 aa14.56□□□□□ -0.08
SREBF1-220ENST00000581707 SLC25A21Q9BQT8 299 aaPredicted RBP14.56□□□□□ -0.08
SREBF1-220ENST00000581707 GINS3Q9BRX5 216 aa14.56□□□□□ -0.08
SREBF1-220ENST00000581707 HIPK2Q9H2X6 1198 aa14.56□□□□□ -0.08
SREBF1-220ENST00000581707 SHPKQ9UHJ6 478 aa14.56□□□□□ -0.08
SREBF1-220ENST00000581707 NXPH3O95157 252 aa14.55□□□□□ -0.08
SREBF1-220ENST00000581707 CCR6P51684 374 aa14.55□□□□□ -0.08
SREBF1-220ENST00000581707 SMCO1Q147U7 214 aa14.55□□□□□ -0.08
SREBF1-220ENST00000581707 C2orf83Q53S99 150 aa14.55□□□□□ -0.08
SREBF1-220ENST00000581707 TMEM128Q5BJH2 165 aa14.55□□□□□ -0.08
SREBF1-220ENST00000581707 NMSQ5H8A3 153 aa14.55□□□□□ -0.08
SREBF1-220ENST00000581707 ZNF600Q6ZNG1 722 aa14.55□□□□□ -0.08
SREBF1-220ENST00000581707 OR4X1Q8NH49 305 aa14.55□□□□□ -0.08
SREBF1-220ENST00000581707 SRRQ9GZT4 340 aa14.55□□□□□ -0.08
SREBF1-220ENST00000581707 MRPL36Q9P0J6 103 aaKnown RBP14.55□□□□□ -0.08
SREBF1-220ENST00000581707 PUS1Q9Y606 427 aaKnown RBP eCLIP14.55□□□□□ -0.08
SREBF1-220ENST00000581707 PIGBOS1A0A0B4J2F0 54 aa14.54□□□□□ -0.08
SREBF1-220ENST00000581707 RPS10-NUDT3A0A1W2PQS6 291 aa14.54□□□□□ -0.08
SREBF1-220ENST00000581707 OR4C46A6NHA9 309 aa14.54□□□□□ -0.08
SREBF1-220ENST00000581707 CLN5O75503 358 aa14.54□□□□□ -0.08
SREBF1-220ENST00000581707 SLC24A4Q8NFF2 622 aa14.54□□□□□ -0.08
SREBF1-220ENST00000581707 RETNQ9HD89 108 aa14.54□□□□□ -0.08
SREBF1-220ENST00000581707 SCGB2A1O75556 95 aa14.53□□□□□ -0.08
SREBF1-220ENST00000581707 TNFRSF9Q07011 255 aa14.53□□□□□ -0.08
SREBF1-220ENST00000581707 RNASEH2CQ8TDP1 164 aaKnown RBP14.53□□□□□ -0.08
SREBF1-220ENST00000581707 GGTLC1Q9BX51 225 aa14.53□□□□□ -0.08
SREBF1-220ENST00000581707 EDA2RQ9HAV5 297 aa14.53□□□□□ -0.08
SREBF1-220ENST00000581707 HSPB7Q9UBY9 170 aa14.53□□□□□ -0.08
SREBF1-220ENST00000581707 UBQLN2Q9UHD9 624 aa14.53□□□□□ -0.08
SREBF1-220ENST00000581707 DNAH7Q8WXX0 4024 aa14.52□□□□□ -0.08
SREBF1-220ENST00000581707 IGHV3OR16-13A0A075B7E8 117 aa14.52□□□□□ -0.09
SREBF1-220ENST00000581707 LOC102724200A0A096LPH7 203 aaPredicted RBP14.52□□□□□ -0.09
SREBF1-220ENST00000581707 IGHV3-74A0A0B4J1X5 117 aa14.52□□□□□ -0.09
SREBF1-220ENST00000581707 A0A1B0GU03 582 aa14.52□□□□□ -0.09
SREBF1-220ENST00000581707 VAMP1P23763 118 aa14.52□□□□□ -0.09
SREBF1-220ENST00000581707 BMI1P35226 326 aa14.52□□□□□ -0.09
SREBF1-220ENST00000581707 NOXA1Q86UR1 476 aa14.52□□□□□ -0.09
SREBF1-220ENST00000581707 ZFAND3Q9H8U3 227 aa14.52□□□□□ -0.09
SREBF1-220ENST00000581707 TRAV30A0A087WSZ9 112 aa14.51□□□□□ -0.09
SREBF1-220ENST00000581707 LYL1P12980 280 aa14.51□□□□□ -0.09
SREBF1-220ENST00000581707 NPY1RP25929 384 aa14.51□□□□□ -0.09
SREBF1-220ENST00000581707 INPP1P49441 399 aa14.51□□□□□ -0.09
SREBF1-220ENST00000581707 BAK1Q16611 211 aa14.51□□□□□ -0.09
SREBF1-220ENST00000581707 TMEM170AQ8WVE7 144 aa14.51□□□□□ -0.09
SREBF1-220ENST00000581707 FAM110AQ9BQ89 295 aa14.51□□□□□ -0.09
SREBF1-220ENST00000581707 RBKSQ9H477 322 aa14.51□□□□□ -0.09
SREBF1-220ENST00000581707 KMT2CQ8NEZ4 4911 aaKnown RBP14.5□□□□□ -0.09
SREBF1-220ENST00000581707 DUXBA0A1W2PPF3 345 aa14.5□□□□□ -0.09
SREBF1-220ENST00000581707 IFNA10P01566 189 aa14.5□□□□□ -0.09
SREBF1-220ENST00000581707 IGKV1-17P01599 117 aa14.5□□□□□ -0.09
SREBF1-220ENST00000581707 APOHP02749 345 aaPredicted RBP14.5□□□□□ -0.09
SREBF1-220ENST00000581707 CD5P06127 495 aa14.5□□□□□ -0.09
SREBF1-220ENST00000581707 SLC25A4P12235 298 aa14.5□□□□□ -0.09
SREBF1-220ENST00000581707 RBMS2Q15434 407 aaKnown RBP14.5□□□□□ -0.09
SREBF1-220ENST00000581707 ODF3L2Q3SX64 289 aa14.5□□□□□ -0.09
SREBF1-220ENST00000581707 TIGITQ495A1 244 aa14.5□□□□□ -0.09
SREBF1-220ENST00000581707 CASC10Q5T4H9 136 aa14.5□□□□□ -0.09
SREBF1-220ENST00000581707 TRIQKQ629K1 86 aa14.5□□□□□ -0.09
SREBF1-220ENST00000581707 FAM90A2PQ658T7 463 aa14.5□□□□□ -0.09
SREBF1-220ENST00000581707 PRSS54Q6PEW0 395 aa14.5□□□□□ -0.09
SREBF1-220ENST00000581707 TCF24Q7RTU0 167 aa14.5□□□□□ -0.09
SREBF1-220ENST00000581707 CENPSQ8N2Z9 138 aa14.5□□□□□ -0.09
SREBF1-220ENST00000581707 LRTM2Q8N967 370 aa14.5□□□□□ -0.09
SREBF1-220ENST00000581707 OR1S1Q8NH92 325 aa14.5□□□□□ -0.09
SREBF1-220ENST00000581707 DTD1Q8TEA8 209 aa14.5□□□□□ -0.09
SREBF1-220ENST00000581707 ST8SIA2Q92186 375 aa14.5□□□□□ -0.09
SREBF1-220ENST00000581707 VSIRQ9H7M9 311 aa14.5□□□□□ -0.09
SREBF1-220ENST00000581707 NDUFA13Q9P0J0 144 aa14.5□□□□□ -0.09
SREBF1-220ENST00000581707 U3KQ87 197 aa14.5□□□□□ -0.09
SREBF1-220ENST00000581707 IGKV3-7A0A075B6H7 116 aa14.49□□□□□ -0.09
SREBF1-220ENST00000581707 SFT2D2O95562 160 aa14.49□□□□□ -0.09
SREBF1-220ENST00000581707 NPPCP23582 126 aa14.49□□□□□ -0.09
SREBF1-220ENST00000581707 TFPI2P48307 235 aa14.49□□□□□ -0.09
SREBF1-220ENST00000581707 RND2P52198 227 aa14.49□□□□□ -0.09
SREBF1-220ENST00000581707 ETFRF1Q6IPR1 90 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms