RNA–Protein interactions for RNA: ENST00000581487.1

CMTM4-205, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

Gene CMTM4, Length 7,026 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-205ENST00000581487 SMIM8Q96KF7 97 aa6.31□□□□□ -1.4
CMTM4-205ENST00000581487 TMEM222Q9H0R3 208 aa6.31□□□□□ -1.4
CMTM4-205ENST00000581487 TRAV8-3A0A0A6YYJ7 113 aa6.31□□□□□ -1.4
CMTM4-205ENST00000581487 TRGV3P03979 118 aa6.31□□□□□ -1.4
CMTM4-205ENST00000581487 LCN2P80188 198 aa6.31□□□□□ -1.4
CMTM4-205ENST00000581487 EPDR1Q9UM22 224 aa6.31□□□□□ -1.4
CMTM4-205ENST00000581487 SMCHD1A6NHR9 2005 aa6.31□□□□□ -1.4
CMTM4-205ENST00000581487 IGHV3OR15-7A0A075B7D8 119 aa6.31□□□□□ -1.4
CMTM4-205ENST00000581487 TRAV12-1A0A0B4J245 112 aa6.31□□□□□ -1.4
CMTM4-205ENST00000581487 PAX1P15863 534 aa6.31□□□□□ -1.4
CMTM4-205ENST00000581487 C1QL4Q86Z23 238 aa6.31□□□□□ -1.4
CMTM4-205ENST00000581487 C1orf174Q8IYL3 243 aa6.31□□□□□ -1.4
CMTM4-205ENST00000581487 SRSF12Q8WXF0 261 aaKnown RBP6.31□□□□□ -1.4
CMTM4-205ENST00000581487 REG4Q9BYZ8 158 aa6.31□□□□□ -1.4
CMTM4-205ENST00000581487 SOCS3O14543 225 aa6.31□□□□□ -1.4
CMTM4-205ENST00000581487 ZNF708P17019 499 aa6.31□□□□□ -1.4
CMTM4-205ENST00000581487 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.31□□□□□ -1.4
CMTM4-205ENST00000581487 LHFPL6Q9Y693 200 aa6.31□□□□□ -1.4
CMTM4-205ENST00000581487 UPK2O00526 184 aa6.3□□□□□ -1.4
CMTM4-205ENST00000581487 CCL3P10147 92 aa6.3□□□□□ -1.4
CMTM4-205ENST00000581487 UCP1P25874 307 aa6.3□□□□□ -1.4
CMTM4-205ENST00000581487 MP68P56378 58 aa6.3□□□□□ -1.4
CMTM4-205ENST00000581487 FAM27BQ5VT28 67 aa6.3□□□□□ -1.4
CMTM4-205ENST00000581487 SLC25A47Q6Q0C1 308 aa6.3□□□□□ -1.4
CMTM4-205ENST00000581487 ORMDL3Q8N138 153 aa6.3□□□□□ -1.4
CMTM4-205ENST00000581487 Q8NFD4 153 aa6.3□□□□□ -1.4
CMTM4-205ENST00000581487 TSSC4Q9Y5U2 329 aaPredicted RBP6.3□□□□□ -1.4
CMTM4-205ENST00000581487 TMEM238C9JI98 176 aa6.3□□□□□ -1.4
CMTM4-205ENST00000581487 J3QRE1 110 aa6.3□□□□□ -1.4
CMTM4-205ENST00000581487 AZU1P20160 251 aa6.3□□□□□ -1.4
CMTM4-205ENST00000581487 LINC00114Q6XXX2 140 aa6.3□□□□□ -1.4
CMTM4-205ENST00000581487 ARPC1AQ92747 370 aa6.3□□□□□ -1.4
CMTM4-205ENST00000581487 ARFGEF1Q9Y6D6 1849 aa6.3□□□□□ -1.4
CMTM4-205ENST00000581487 MYO7AQ13402 2215 aa6.3□□□□□ -1.4
CMTM4-205ENST00000581487 A0A1B0GTI1 187 aa6.3□□□□□ -1.4
CMTM4-205ENST00000581487 LYPD3O95274 346 aa6.3□□□□□ -1.4
CMTM4-205ENST00000581487 SLC22A18ASQ8N1D0 253 aa6.3□□□□□ -1.4
CMTM4-205ENST00000581487 FOCADQ5VW36 1801 aa6.3□□□□□ -1.4
CMTM4-205ENST00000581487 CEACAM18A8MTB9 384 aa6.3□□□□□ -1.4
CMTM4-205ENST00000581487 SAP30O75446 220 aa6.3□□□□□ -1.4
CMTM4-205ENST00000581487 UNC119Q13432 240 aa6.3□□□□□ -1.4
CMTM4-205ENST00000581487 KLF5Q13887 457 aaPredicted RBP6.3□□□□□ -1.4
CMTM4-205ENST00000581487 CENPWQ5EE01 88 aa6.3□□□□□ -1.4
CMTM4-205ENST00000581487 TMEM167AQ8TBQ9 72 aa6.3□□□□□ -1.4
CMTM4-205ENST00000581487 SCARF2Q96GP6 870 aaPredicted RBP6.3□□□□□ -1.4
CMTM4-205ENST00000581487 A0A087WV48 116 aa6.3□□□□□ -1.4
CMTM4-205ENST00000581487 A0A087X0K7 114 aa6.3□□□□□ -1.4
CMTM4-205ENST00000581487 FAM90A10PA6NDY2 464 aa6.3□□□□□ -1.4
CMTM4-205ENST00000581487 FAM90A8PA6NJQ4 464 aa6.3□□□□□ -1.4
CMTM4-205ENST00000581487 FAM90A13PP0C7W8 464 aa6.3□□□□□ -1.4
CMTM4-205ENST00000581487 FAM90A24PP0C7X0 464 aa6.3□□□□□ -1.4
CMTM4-205ENST00000581487 CDKN1BP46527 198 aa6.3□□□□□ -1.4
CMTM4-205ENST00000581487 LY6G6FQ5SQ64 297 aa6.3□□□□□ -1.4
CMTM4-205ENST00000581487 UBL5Q9BZL1 73 aa6.3□□□□□ -1.4
CMTM4-205ENST00000581487 FAM90A20PA6NIJ5 464 aa6.29□□□□□ -1.4
CMTM4-205ENST00000581487 J3QT63 122 aa6.29□□□□□ -1.4
CMTM4-205ENST00000581487 GAGE7O76087 117 aa6.29□□□□□ -1.4
CMTM4-205ENST00000581487 IGKV4-1P06312 121 aa6.29□□□□□ -1.4
CMTM4-205ENST00000581487 ACYP1P07311 99 aa6.29□□□□□ -1.4
CMTM4-205ENST00000581487 GAGE12FP0CL80 117 aa6.29□□□□□ -1.4
CMTM4-205ENST00000581487 GAGE12GP0CL81 117 aa6.29□□□□□ -1.4
CMTM4-205ENST00000581487 GAGE12IP0CL82 117 aa6.29□□□□□ -1.4
CMTM4-205ENST00000581487 MYOD1P15172 320 aa6.29□□□□□ -1.4
CMTM4-205ENST00000581487 RPL35AP18077 110 aaKnown RBP6.29□□□□□ -1.4
CMTM4-205ENST00000581487 MIC13Q5XKP0 118 aa6.29□□□□□ -1.4
CMTM4-205ENST00000581487 SIGLEC15Q6ZMC9 328 aa6.29□□□□□ -1.4
CMTM4-205ENST00000581487 COLCA1Q6ZS62 124 aa6.29□□□□□ -1.4
CMTM4-205ENST00000581487 WFDC12Q8WWY7 111 aa6.29□□□□□ -1.4
CMTM4-205ENST00000581487 LOC101059948A0A1B0GTJ6 334 aa6.29□□□□□ -1.4
CMTM4-205ENST00000581487 HSD52Q0P140 79 aa6.29□□□□□ -1.4
CMTM4-205ENST00000581487 FER1L6-AS1Q8NA97 138 aa6.29□□□□□ -1.4
CMTM4-205ENST00000581487 CLDND2Q8NHS1 167 aa6.29□□□□□ -1.4
CMTM4-205ENST00000581487 CA11O75493 328 aa6.29□□□□□ -1.4
CMTM4-205ENST00000581487 ERG28Q9UKR5 140 aa6.29□□□□□ -1.4
CMTM4-205ENST00000581487 CACNA1CQ13936 2221 aa6.29□□□□□ -1.4
CMTM4-205ENST00000581487 REG1AP05451 166 aa6.29□□□□□ -1.4
CMTM4-205ENST00000581487 LIFP15018 202 aa6.29□□□□□ -1.4
CMTM4-205ENST00000581487 ZNF501Q96CX3 271 aaPredicted RBP6.29□□□□□ -1.4
CMTM4-205ENST00000581487 MBNL3Q9NUK0 354 aaKnown RBP6.29□□□□□ -1.4
CMTM4-205ENST00000581487 UCP2P55851 309 aa6.29□□□□□ -1.4
CMTM4-205ENST00000581487 RASL10AQ92737 203 aa6.29□□□□□ -1.4
CMTM4-205ENST00000581487 GFI1Q99684 422 aa6.29□□□□□ -1.4
CMTM4-205ENST00000581487 COL11A2P13942 1736 aaPredicted RBP6.29□□□□□ -1.4
CMTM4-205ENST00000581487 NPIPB4C9JG80 1138 aa6.29□□□□□ -1.4
CMTM4-205ENST00000581487 UCNP55089 124 aa6.29□□□□□ -1.4
CMTM4-205ENST00000581487 TMEM187Q14656 261 aa6.29□□□□□ -1.4
CMTM4-205ENST00000581487 ZNF585BQ52M93 769 aa6.29□□□□□ -1.4
CMTM4-205ENST00000581487 ZNF488Q96MN9 340 aa6.29□□□□□ -1.4
CMTM4-205ENST00000581487 NABP2Q9BQ15 211 aa6.29□□□□□ -1.4
CMTM4-205ENST00000581487 MUC21A0A0G2JKD1 596 aa6.28□□□□□ -1.4
CMTM4-205ENST00000581487 A0A0J9YW62 118 aa6.28□□□□□ -1.4
CMTM4-205ENST00000581487 MUC21A0A140T8X8 626 aa6.28□□□□□ -1.4
CMTM4-205ENST00000581487 CDIPTO14735 213 aa6.28□□□□□ -1.4
CMTM4-205ENST00000581487 CD7P09564 240 aa6.28□□□□□ -1.4
CMTM4-205ENST00000581487 ICAM4Q14773 271 aa6.28□□□□□ -1.4
CMTM4-205ENST00000581487 MUC21Q5SSG8 566 aa6.28□□□□□ -1.4
CMTM4-205ENST00000581487 TXNDC17Q9BRA2 123 aa6.28□□□□□ -1.4
CMTM4-205ENST00000581487 XIRP1Q702N8 1843 aaKnown RBP6.28□□□□□ -1.4
CMTM4-205ENST00000581487 FOXH1O75593 365 aa6.28□□□□□ -1.4
CMTM4-205ENST00000581487 CMC4P56277 68 aaPredicted RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms