RNA–Protein interactions for RNA: ENST00000581039.1

RFFL-208, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 424 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-208ENST00000581039 S100GP29377 79 aa7.11□□□□□ -1.27
RFFL-208ENST00000581039 SDC2P34741 201 aa7.11□□□□□ -1.27
RFFL-208ENST00000581039 EMP1P54849 157 aa7.11□□□□□ -1.27
RFFL-208ENST00000581039 MXD1Q05195 221 aa7.11□□□□□ -1.27
RFFL-208ENST00000581039 DHRS2Q13268 280 aa7.11□□□□□ -1.27
RFFL-208ENST00000581039 RNF212Q495C1 297 aa7.11□□□□□ -1.27
RFFL-208ENST00000581039 KCTD21Q4G0X4 260 aa7.11□□□□□ -1.27
RFFL-208ENST00000581039 PSMG4Q5JS54 123 aa7.11□□□□□ -1.27
RFFL-208ENST00000581039 IDNKQ5T6J7 187 aa7.11□□□□□ -1.27
RFFL-208ENST00000581039 MAPKAPK5-AS1Q8N8E1 139 aa7.11□□□□□ -1.27
RFFL-208ENST00000581039 OR6F1Q8NGZ6 308 aa7.11□□□□□ -1.27
RFFL-208ENST00000581039 DCANP1Q8TF63 244 aa7.11□□□□□ -1.27
RFFL-208ENST00000581039 SLC25A38Q96DW6 304 aa7.11□□□□□ -1.27
RFFL-208ENST00000581039 XCL2Q9UBD3 114 aa7.11□□□□□ -1.27
RFFL-208ENST00000581039 SSR3Q9UNL2 185 aa7.11□□□□□ -1.27
RFFL-208ENST00000581039 TMEM189A5PLL7 270 aa7.1□□□□□ -1.27
RFFL-208ENST00000581039 HELTA6NFD8 242 aa7.1□□□□□ -1.27
RFFL-208ENST00000581039 C16orf90A8MZG2 172 aa7.1□□□□□ -1.27
RFFL-208ENST00000581039 CDK2AP2O75956 126 aa7.1□□□□□ -1.27
RFFL-208ENST00000581039 PPP5CP53041 499 aa7.1□□□□□ -1.27
RFFL-208ENST00000581039 AP2S1P53680 142 aaPredicted RBP7.1□□□□□ -1.27
RFFL-208ENST00000581039 SUB1P53999 127 aaKnown RBP eCLIP7.1□□□□□ -1.27
RFFL-208ENST00000581039 PHLDA2Q53GA4 152 aa7.1□□□□□ -1.27
RFFL-208ENST00000581039 LPCAT3Q6P1A2 487 aa7.1□□□□□ -1.27
RFFL-208ENST00000581039 OR5H2Q8NGV7 314 aa7.1□□□□□ -1.27
RFFL-208ENST00000581039 SEC22AQ96IW7 307 aa7.1□□□□□ -1.27
RFFL-208ENST00000581039 FAM212BQ9NTI7 297 aaPredicted RBP7.1□□□□□ -1.27
RFFL-208ENST00000581039 SMIM9A6NGZ8 99 aa7.09□□□□□ -1.27
RFFL-208ENST00000581039 CORTO00230 105 aa7.09□□□□□ -1.27
RFFL-208ENST00000581039 CLN5O75503 358 aa7.09□□□□□ -1.27
RFFL-208ENST00000581039 CLEC2LP0C7M8 214 aa7.09□□□□□ -1.27
RFFL-208ENST00000581039 PSMB9P28065 219 aa7.09□□□□□ -1.27
RFFL-208ENST00000581039 TAS2R46P59540 309 aa7.09□□□□□ -1.27
RFFL-208ENST00000581039 SNRPD3P62318 126 aaKnown RBP7.09□□□□□ -1.27
RFFL-208ENST00000581039 SPINK9Q5DT21 86 aa7.09□□□□□ -1.27
RFFL-208ENST00000581039 NRG4Q8WWG1 115 aa7.09□□□□□ -1.27
RFFL-208ENST00000581039 S100A16Q96FQ6 103 aaKnown RBP7.09□□□□□ -1.27
RFFL-208ENST00000581039 CNBD2Q96M20 576 aa7.09□□□□□ -1.27
RFFL-208ENST00000581039 H3BMM0 161 aa7.08□□□□□ -1.28
RFFL-208ENST00000581039 TSPAN5P62079 268 aa7.08□□□□□ -1.28
RFFL-208ENST00000581039 TBC1D26Q86UD7 250 aa7.08□□□□□ -1.28
RFFL-208ENST00000581039 SLC35G3Q8N808 338 aa7.08□□□□□ -1.28
RFFL-208ENST00000581039 OR4X1Q8NH49 305 aa7.08□□□□□ -1.28
RFFL-208ENST00000581039 MRGPRFQ96AM1 343 aa7.08□□□□□ -1.28
RFFL-208ENST00000581039 NEU1Q99519 415 aa7.08□□□□□ -1.28
RFFL-208ENST00000581039 FXYD6Q9H0Q3 95 aa7.08□□□□□ -1.28
RFFL-208ENST00000581039 RNF167Q9H6Y7 350 aa7.08□□□□□ -1.28
RFFL-208ENST00000581039 HSPG2P98160 4391 aa7.08□□□□□ -1.28
RFFL-208ENST00000581039 IGHV3OR16-12A0A075B7B8 117 aa7.07□□□□□ -1.28
RFFL-208ENST00000581039 TRAV30A0A087WSZ9 112 aa7.07□□□□□ -1.28
RFFL-208ENST00000581039 TEX48A0A1B0GUV7 120 aa7.07□□□□□ -1.28
RFFL-208ENST00000581039 INS-IGF2F8WCM5 200 aa7.07□□□□□ -1.28
RFFL-208ENST00000581039 IGKV1-39P01597 117 aa7.07□□□□□ -1.28
RFFL-208ENST00000581039 IGKV1D-39P04432 117 aa7.07□□□□□ -1.28
RFFL-208ENST00000581039 HTN3P15516 51 aa7.07□□□□□ -1.28
RFFL-208ENST00000581039 OPRK1P41145 380 aa7.07□□□□□ -1.28
RFFL-208ENST00000581039 MLANAQ16655 118 aa7.07□□□□□ -1.28
RFFL-208ENST00000581039 TIGITQ495A1 244 aa7.07□□□□□ -1.28
RFFL-208ENST00000581039 C16orf54Q6UWD8 224 aa7.07□□□□□ -1.28
RFFL-208ENST00000581039 ZNF705AQ6ZN79 300 aaPredicted RBP7.07□□□□□ -1.28
RFFL-208ENST00000581039 Q8WTZ3 238 aa7.07□□□□□ -1.28
RFFL-208ENST00000581039 NIPSNAP3BQ9BS92 247 aa7.07□□□□□ -1.28
RFFL-208ENST00000581039 PDCD10Q9BUL8 212 aa7.07□□□□□ -1.28
RFFL-208ENST00000581039 SEPSECSQ9HD40 501 aaKnown RBP7.07□□□□□ -1.28
RFFL-208ENST00000581039 ENY2Q9NPA8 101 aa7.07□□□□□ -1.28
RFFL-208ENST00000581039 MRPL36Q9P0J6 103 aaKnown RBP7.07□□□□□ -1.28
RFFL-208ENST00000581039 TMED3Q9Y3Q3 217 aa7.07□□□□□ -1.28
RFFL-208ENST00000581039 RFNGQ9Y644 331 aa7.07□□□□□ -1.28
RFFL-208ENST00000581039 U3KQE9 123 aa7.07□□□□□ -1.28
RFFL-208ENST00000581039 ZNF705FA8MVS1 300 aaPredicted RBP7.06□□□□□ -1.28
RFFL-208ENST00000581039 FAM90A26D6RGX4 464 aa7.06□□□□□ -1.28
RFFL-208ENST00000581039 IGKV1-17P01599 117 aa7.06□□□□□ -1.28
RFFL-208ENST00000581039 HNRNPCP07910 306 aaKnown RBP eCLIP7.06□□□□□ -1.28
RFFL-208ENST00000581039 ZNF705DP0CH99 300 aaPredicted RBP7.06□□□□□ -1.28
RFFL-208ENST00000581039 ZNF705BP0CI00 300 aaPredicted RBP7.06□□□□□ -1.28
RFFL-208ENST00000581039 RNASE2P10153 161 aaKnown RBP7.06□□□□□ -1.28
RFFL-208ENST00000581039 NAT1P18440 290 aa7.06□□□□□ -1.28
RFFL-208ENST00000581039 HLA-DMAP28067 261 aa7.06□□□□□ -1.28
RFFL-208ENST00000581039 HRH1P35367 487 aa7.06□□□□□ -1.28
RFFL-208ENST00000581039 ETV6P41212 452 aa7.06□□□□□ -1.28
RFFL-208ENST00000581039 RPL5P46777 297 aaKnown RBP7.06□□□□□ -1.28
RFFL-208ENST00000581039 FAM3BP58499 235 aaPredicted RBP7.06□□□□□ -1.28
RFFL-208ENST00000581039 TAS2R20P59543 309 aa7.06□□□□□ -1.28
RFFL-208ENST00000581039 TNP2Q05952 138 aa7.06□□□□□ -1.28
RFFL-208ENST00000581039 IZUMO4Q1ZYL8 232 aa7.06□□□□□ -1.28
RFFL-208ENST00000581039 TMEM69Q5SWH9 247 aa7.06□□□□□ -1.28
RFFL-208ENST00000581039 FAM222AQ5U5X8 452 aa7.06□□□□□ -1.28
RFFL-208ENST00000581039 LYSMD2Q8IV50 215 aa7.06□□□□□ -1.28
RFFL-208ENST00000581039 SPARTQ8N0X7 666 aa7.06□□□□□ -1.28
RFFL-208ENST00000581039 GLMPQ8WWB7 406 aa7.06□□□□□ -1.28
RFFL-208ENST00000581039 FCGR1BQ92637 280 aa7.06□□□□□ -1.28
RFFL-208ENST00000581039 FNDC4Q9H6D8 234 aaPredicted RBP7.06□□□□□ -1.28
RFFL-208ENST00000581039 NRN1Q9NPD7 142 aa7.06□□□□□ -1.28
RFFL-208ENST00000581039 DKK2Q9UBU2 259 aa7.06□□□□□ -1.28
RFFL-208ENST00000581039 ANAPC10Q9UM13 185 aa7.06□□□□□ -1.28
RFFL-208ENST00000581039 A0A0B4J293 547 aa7.05□□□□□ -1.28
RFFL-208ENST00000581039 LOC100506127A0A0U1RQW1 187 aa7.05□□□□□ -1.28
RFFL-208ENST00000581039 TMEM127O75204 238 aa7.05□□□□□ -1.28
RFFL-208ENST00000581039 IGKV3-20P01619 116 aa7.05□□□□□ -1.28
RFFL-208ENST00000581039 HLA-DRB4P13762 266 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms