RNA–Protein interactions for RNA: ENST00000580713.1

TOP3A-210, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 474 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-210ENST00000580713 Q5BKY6 102 aa8.13□□□□□ -1.11
TOP3A-210ENST00000580713 CDPF1Q6NVV7 123 aa8.13□□□□□ -1.11
TOP3A-210ENST00000580713 LINC00322Q6ZN03 302 aaPredicted RBP8.13□□□□□ -1.11
TOP3A-210ENST00000580713 NPBQ8NG41 125 aa8.13□□□□□ -1.11
TOP3A-210ENST00000580713 THAP6Q8TBB0 222 aa8.13□□□□□ -1.11
TOP3A-210ENST00000580713 TMEM167AQ8TBQ9 72 aa8.13□□□□□ -1.11
TOP3A-210ENST00000580713 QTRT1Q9BXR0 403 aaKnown RBP8.13□□□□□ -1.11
TOP3A-210ENST00000580713 FBXL15Q9H469 300 aa8.13□□□□□ -1.11
TOP3A-210ENST00000580713 FKBP11Q9NYL4 201 aa8.13□□□□□ -1.11
TOP3A-210ENST00000580713 METTL1Q9UBP6 276 aaKnown RBP8.13□□□□□ -1.11
TOP3A-210ENST00000580713 CACFD1Q9UGQ2 172 aa8.13□□□□□ -1.11
TOP3A-210ENST00000580713 PRNDQ9UKY0 176 aa8.13□□□□□ -1.11
TOP3A-210ENST00000580713 RCL1Q9Y2P8 373 aaKnown RBP8.13□□□□□ -1.11
TOP3A-210ENST00000580713 KLK5Q9Y337 293 aaPredicted RBP8.13□□□□□ -1.11
TOP3A-210ENST00000580713 DNAH10Q8IVF4 4471 aa8.12□□□□□ -1.11
TOP3A-210ENST00000580713 ANKRD34BA5PLL1 514 aa8.12□□□□□ -1.11
TOP3A-210ENST00000580713 IZUMO1RA6ND01 250 aa8.12□□□□□ -1.11
TOP3A-210ENST00000580713 SSSCA1O60232 199 aa8.12□□□□□ -1.11
TOP3A-210ENST00000580713 MED6O75586 246 aa8.12□□□□□ -1.11
TOP3A-210ENST00000580713 NDUFA3O95167 84 aa8.12□□□□□ -1.11
TOP3A-210ENST00000580713 IFNA17P01571 189 aa8.12□□□□□ -1.11
TOP3A-210ENST00000580713 POLR2GP62487 172 aaKnown RBP eCLIP8.12□□□□□ -1.11
TOP3A-210ENST00000580713 RPL8P62917 257 aaKnown RBP8.12□□□□□ -1.11
TOP3A-210ENST00000580713 TNFRSF9Q07011 255 aa8.12□□□□□ -1.11
TOP3A-210ENST00000580713 TMEM267Q0VDI3 215 aaPredicted RBP8.12□□□□□ -1.11
TOP3A-210ENST00000580713 AARDQ4LEZ3 155 aa8.12□□□□□ -1.11
TOP3A-210ENST00000580713 PRSS54Q6PEW0 395 aa8.12□□□□□ -1.11
TOP3A-210ENST00000580713 CEMP1Q6PRD7 247 aaPredicted RBP8.12□□□□□ -1.11
TOP3A-210ENST00000580713 NOXA1Q86UR1 476 aa8.12□□□□□ -1.11
TOP3A-210ENST00000580713 MMD2Q8IY49 270 aa8.12□□□□□ -1.11
TOP3A-210ENST00000580713 DEFB125Q8N687 156 aa8.12□□□□□ -1.11
TOP3A-210ENST00000580713 OR9G4Q8NGQ1 327 aa8.12□□□□□ -1.11
TOP3A-210ENST00000580713 OR52E5Q8NH55 327 aa8.12□□□□□ -1.11
TOP3A-210ENST00000580713 HYLS1Q96M11 299 aa8.12□□□□□ -1.11
TOP3A-210ENST00000580713 MAGT1Q9H0U3 335 aa8.12□□□□□ -1.11
TOP3A-210ENST00000580713 ZNF430Q9H8G1 570 aaPredicted RBP8.12□□□□□ -1.11
TOP3A-210ENST00000580713 TMEM14BQ9NUH8 114 aa8.12□□□□□ -1.11
TOP3A-210ENST00000580713 SIGLEC8Q9NYZ4 499 aa8.12□□□□□ -1.11
TOP3A-210ENST00000580713 MBD2Q9UBB5 411 aa8.12□□□□□ -1.11
TOP3A-210ENST00000580713 HSPB7Q9UBY9 170 aa8.12□□□□□ -1.11
TOP3A-210ENST00000580713 FBXO7Q9Y3I1 522 aa8.12□□□□□ -1.11
TOP3A-210ENST00000580713 OR51B2Q9Y5P1 312 aa8.12□□□□□ -1.11
TOP3A-210ENST00000580713 FXYD6-FXYD2A0A087WZ82 144 aa8.11□□□□□ -1.11
TOP3A-210ENST00000580713 CEBPZOSA8MTT3 80 aa8.11□□□□□ -1.11
TOP3A-210ENST00000580713 H0YIZ8 118 aa8.11□□□□□ -1.11
TOP3A-210ENST00000580713 L7N2F9 121 aa8.11□□□□□ -1.11
TOP3A-210ENST00000580713 SYNGR2O43760 224 aa8.11□□□□□ -1.11
TOP3A-210ENST00000580713 TRGV3P03979 118 aa8.11□□□□□ -1.11
TOP3A-210ENST00000580713 FGF2P09038 288 aa8.11□□□□□ -1.11
TOP3A-210ENST00000580713 SLC25A4P12235 298 aa8.11□□□□□ -1.11
TOP3A-210ENST00000580713 PVALBP20472 110 aaPredicted RBP8.11□□□□□ -1.11
TOP3A-210ENST00000580713 MAS1LP35410 378 aa8.11□□□□□ -1.11
TOP3A-210ENST00000580713 SYNJ2BPP57105 145 aa8.11□□□□□ -1.11
TOP3A-210ENST00000580713 SPCS3P61009 180 aa8.11□□□□□ -1.11
TOP3A-210ENST00000580713 HSPE1P61604 102 aaKnown RBP8.11□□□□□ -1.11
TOP3A-210ENST00000580713 VAMP2P63027 116 aa8.11□□□□□ -1.11
TOP3A-210ENST00000580713 NDPQ00604 133 aa8.11□□□□□ -1.11
TOP3A-210ENST00000580713 PRSS8Q16651 343 aa8.11□□□□□ -1.11
TOP3A-210ENST00000580713 C19orf54Q5BKX5 351 aa8.11□□□□□ -1.11
TOP3A-210ENST00000580713 UNQ5815/PRO19632Q6UWF5 114 aa8.11□□□□□ -1.11
TOP3A-210ENST00000580713 PPP1R27Q86WC6 154 aa8.11□□□□□ -1.11
TOP3A-210ENST00000580713 OR11H4Q8NGC9 324 aa8.11□□□□□ -1.11
TOP3A-210ENST00000580713 CLCC1Q96S66 551 aa8.11□□□□□ -1.11
TOP3A-210ENST00000580713 RNF126Q9BV68 326 aa8.11□□□□□ -1.11
TOP3A-210ENST00000580713 COMMD5Q9GZQ3 224 aa8.11□□□□□ -1.11
TOP3A-210ENST00000580713 RBKSQ9H477 322 aa8.11□□□□□ -1.11
TOP3A-210ENST00000580713 SRD5A3Q9H8P0 318 aa8.11□□□□□ -1.11
TOP3A-210ENST00000580713 ZNF355PQ9NSJ1 428 aa8.11□□□□□ -1.11
TOP3A-210ENST00000580713 OR5AC2Q9NZP5 309 aa8.11□□□□□ -1.11
TOP3A-210ENST00000580713 ZNF257Q9Y2Q1 563 aa8.11□□□□□ -1.11
TOP3A-210ENST00000580713 TEX50A0A1B0GTY4 177 aa8.1□□□□□ -1.11
TOP3A-210ENST00000580713 HMSDA8MTL9 139 aa8.1□□□□□ -1.11
TOP3A-210ENST00000580713 E5RGE8 158 aa8.1□□□□□ -1.11
TOP3A-210ENST00000580713 ACTL6BO94805 426 aa8.1□□□□□ -1.11
TOP3A-210ENST00000580713 MYOD1P15172 320 aa8.1□□□□□ -1.11
TOP3A-210ENST00000580713 HOXA1P49639 335 aaPredicted RBP8.1□□□□□ -1.11
TOP3A-210ENST00000580713 EIF2B2P49770 351 aaKnown RBP8.1□□□□□ -1.11
TOP3A-210ENST00000580713 CX3CL1P78423 397 aa8.1□□□□□ -1.11
TOP3A-210ENST00000580713 PJVKQ0ZLH3 352 aa8.1□□□□□ -1.11
TOP3A-210ENST00000580713 KLF5Q13887 457 aaPredicted RBP8.1□□□□□ -1.11
TOP3A-210ENST00000580713 TNXAQ16473 311 aa8.1□□□□□ -1.11
TOP3A-210ENST00000580713 MRGPRG-AS1Q2M3A8 158 aa8.1□□□□□ -1.11
TOP3A-210ENST00000580713 SPINK9Q5DT21 86 aa8.1□□□□□ -1.11
TOP3A-210ENST00000580713 IL34Q6ZMJ4 242 aa8.1□□□□□ -1.11
TOP3A-210ENST00000580713 ZNF546Q86UE3 836 aa8.1□□□□□ -1.11
TOP3A-210ENST00000580713 OR1L8Q8NGR8 309 aa8.1□□□□□ -1.11
TOP3A-210ENST00000580713 OR5B3Q8NH48 314 aa8.1□□□□□ -1.11
TOP3A-210ENST00000580713 DTD1Q8TEA8 209 aa8.1□□□□□ -1.11
TOP3A-210ENST00000580713 RAB40CQ96S21 281 aa8.1□□□□□ -1.11
TOP3A-210ENST00000580713 HINT2Q9BX68 163 aa8.1□□□□□ -1.11
TOP3A-210ENST00000580713 OR11H12B2RN74 326 aa8.09□□□□□ -1.11
TOP3A-210ENST00000580713 FCN1O00602 326 aa8.09□□□□□ -1.11
TOP3A-210ENST00000580713 CA2P00918 260 aa8.09□□□□□ -1.11
TOP3A-210ENST00000580713 CSN3P07498 182 aa8.09□□□□□ -1.11
TOP3A-210ENST00000580713 CD7P09564 240 aa8.09□□□□□ -1.11
TOP3A-210ENST00000580713 IAPPP10997 89 aa8.09□□□□□ -1.11
TOP3A-210ENST00000580713 NUP62P37198 522 aaPredicted RBP8.09□□□□□ -1.11
TOP3A-210ENST00000580713 RPL27AP46776 148 aaKnown RBP8.09□□□□□ -1.11
TOP3A-210ENST00000580713 CRIP2P52943 208 aaPredicted RBP8.09□□□□□ -1.11
TOP3A-210ENST00000580713 NKX2-5P52952 324 aaPredicted RBP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms