RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 KIAA0141Q14154 515 aaPredicted RBP11.09□□□□□ -0.63
SKA2-205ENST00000580541 OR8G2PQ6IF36 304 aa11.09□□□□□ -0.63
SKA2-205ENST00000580541 SPSB3Q6PJ21 355 aa11.09□□□□□ -0.63
SKA2-205ENST00000580541 C19orf35Q6ZS72 473 aa11.09□□□□□ -0.63
SKA2-205ENST00000580541 LCNL1Q6ZST4 164 aa11.09□□□□□ -0.63
SKA2-205ENST00000580541 TCTE3Q8IZS6 198 aa11.09□□□□□ -0.63
SKA2-205ENST00000580541 KLHL30-AS1Q8NEE0 82 aa11.09□□□□□ -0.63
SKA2-205ENST00000580541 DPF1Q92782 380 aa11.09□□□□□ -0.63
SKA2-205ENST00000580541 OR4C12Q96R67 309 aa11.09□□□□□ -0.63
SKA2-205ENST00000580541 C11orf1Q9H5F2 150 aa11.09□□□□□ -0.63
SKA2-205ENST00000580541 PEF1Q9UBV8 284 aaKnown RBP11.09□□□□□ -0.63
SKA2-205ENST00000580541 DMRT1Q9Y5R6 373 aa11.09□□□□□ -0.63
SKA2-205ENST00000580541 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.08□□□□□ -0.64
SKA2-205ENST00000580541 A0A1B0GVG6 124 aa11.08□□□□□ -0.64
SKA2-205ENST00000580541 NUPL2O15504 423 aaKnown RBP11.08□□□□□ -0.64
SKA2-205ENST00000580541 GNG7O60262 68 aa11.08□□□□□ -0.64
SKA2-205ENST00000580541 IGHV3-11P01762 117 aa11.08□□□□□ -0.64
SKA2-205ENST00000580541 HSPB1P04792 205 aaKnown RBP11.08□□□□□ -0.64
SKA2-205ENST00000580541 CLEC3BP05452 202 aa11.08□□□□□ -0.64
SKA2-205ENST00000580541 RPL12P30050 165 aaKnown RBP11.08□□□□□ -0.64
SKA2-205ENST00000580541 DLK1P80370 383 aa11.08□□□□□ -0.64
SKA2-205ENST00000580541 Q56UQ5 140 aa11.08□□□□□ -0.64
SKA2-205ENST00000580541 OR4F17Q8NGA8 305 aa11.08□□□□□ -0.64
SKA2-205ENST00000580541 OR4X1Q8NH49 305 aa11.08□□□□□ -0.64
SKA2-205ENST00000580541 ZNF502Q8TBZ5 544 aa11.08□□□□□ -0.64
SKA2-205ENST00000580541 TMEM170AQ8WVE7 144 aa11.08□□□□□ -0.64
SKA2-205ENST00000580541 BSCL2Q96G97 398 aaPredicted RBP11.08□□□□□ -0.64
SKA2-205ENST00000580541 OR4F4Q96R69 305 aa11.08□□□□□ -0.64
SKA2-205ENST00000580541 FXYD6-FXYD2A0A087WZ82 144 aa11.07□□□□□ -0.64
SKA2-205ENST00000580541 TRAV14DV4A0A0A6YYC5 116 aa11.07□□□□□ -0.64
SKA2-205ENST00000580541 CST7O76096 145 aa11.07□□□□□ -0.64
SKA2-205ENST00000580541 FABP1P07148 127 aa11.07□□□□□ -0.64
SKA2-205ENST00000580541 ZP3P21754 424 aa11.07□□□□□ -0.64
SKA2-205ENST00000580541 NSUN5P1Q3KNT7 163 aa11.07□□□□□ -0.64
SKA2-205ENST00000580541 SLC16A13Q7RTY0 426 aa11.07□□□□□ -0.64
SKA2-205ENST00000580541 LILRB2Q8N423 598 aa11.07□□□□□ -0.64
SKA2-205ENST00000580541 UBAC2Q8NBM4 344 aa11.07□□□□□ -0.64
SKA2-205ENST00000580541 TMEM116Q8NCL8 245 aa11.07□□□□□ -0.64
SKA2-205ENST00000580541 OR1S2Q8NGQ3 325 aa11.07□□□□□ -0.64
SKA2-205ENST00000580541 ST6GAL2Q96JF0 529 aa11.07□□□□□ -0.64
SKA2-205ENST00000580541 NPVFQ9HCQ7 196 aa11.07□□□□□ -0.64
SKA2-205ENST00000580541 IGHV3-21A0A0B4J1V1 117 aa11.06□□□□□ -0.64
SKA2-205ENST00000580541 A0A1W2PRX2 142 aa11.06□□□□□ -0.64
SKA2-205ENST00000580541 MFSD2BA6NFX1 497 aa11.06□□□□□ -0.64
SKA2-205ENST00000580541 HMSDA8MTL9 139 aa11.06□□□□□ -0.64
SKA2-205ENST00000580541 I3L521 148 aa11.06□□□□□ -0.64
SKA2-205ENST00000580541 M0QZ24 198 aa11.06□□□□□ -0.64
SKA2-205ENST00000580541 GGCTO75223 188 aaKnown RBP11.06□□□□□ -0.64
SKA2-205ENST00000580541 CLN5O75503 358 aa11.06□□□□□ -0.64
SKA2-205ENST00000580541 KRTAP10-3P60369 221 aa11.06□□□□□ -0.64
SKA2-205ENST00000580541 EWSR1Q01844 656 aaKnown RBP eCLIP11.06□□□□□ -0.64
SKA2-205ENST00000580541 SLC38A11Q08AI6 406 aa11.06□□□□□ -0.64
SKA2-205ENST00000580541 RAB31Q13636 194 aa11.06□□□□□ -0.64
SKA2-205ENST00000580541 CLEC19AQ6UXS0 136 aa11.06□□□□□ -0.64
SKA2-205ENST00000580541 TMEM217Q8N7C4 229 aa11.06□□□□□ -0.64
SKA2-205ENST00000580541 OR1N2Q8NGR9 330 aa11.06□□□□□ -0.64
SKA2-205ENST00000580541 OR5B12Q96R08 314 aa11.06□□□□□ -0.64
SKA2-205ENST00000580541 FNDC4Q9H6D8 234 aaPredicted RBP11.06□□□□□ -0.64
SKA2-205ENST00000580541 GNB4Q9HAV0 340 aa11.06□□□□□ -0.64
SKA2-205ENST00000580541 COL6A5A8TX70 2615 aa11.05□□□□□ -0.64
SKA2-205ENST00000580541 IGSF23A1L1A6 192 aa11.05□□□□□ -0.64
SKA2-205ENST00000580541 ANKRD34BA5PLL1 514 aa11.05□□□□□ -0.64
SKA2-205ENST00000580541 PMS2P5A8MQ11 134 aa11.05□□□□□ -0.64
SKA2-205ENST00000580541 LINC01619G3V211 115 aa11.05□□□□□ -0.64
SKA2-205ENST00000580541 PFDN1O60925 122 aa11.05□□□□□ -0.64
SKA2-205ENST00000580541 DFFBO76075 338 aa11.05□□□□□ -0.64
SKA2-205ENST00000580541 ARL3P36405 182 aa11.05□□□□□ -0.64
SKA2-205ENST00000580541 MYCNOSP40205 109 aa11.05□□□□□ -0.64
SKA2-205ENST00000580541 RND2P52198 227 aa11.05□□□□□ -0.64
SKA2-205ENST00000580541 AP2S1P53680 142 aaPredicted RBP11.05□□□□□ -0.64
SKA2-205ENST00000580541 NHLH2Q02577 135 aa11.05□□□□□ -0.64
SKA2-205ENST00000580541 AKR1C1Q04828 323 aa11.05□□□□□ -0.64
SKA2-205ENST00000580541 RELQ04864 619 aaPredicted RBP11.05□□□□□ -0.64
SKA2-205ENST00000580541 ZNF616Q08AN1 781 aa11.05□□□□□ -0.64
SKA2-205ENST00000580541 GAMTQ14353 236 aa11.05□□□□□ -0.64
SKA2-205ENST00000580541 MLANAQ16655 118 aa11.05□□□□□ -0.64
SKA2-205ENST00000580541 FAM106AQ4KMX7 169 aa11.05□□□□□ -0.64
SKA2-205ENST00000580541 ACOT7LQ6ZUV0 252 aa11.05□□□□□ -0.64
SKA2-205ENST00000580541 NPIPB3Q92617 1050 aa11.05□□□□□ -0.64
SKA2-205ENST00000580541 ACY3Q96HD9 319 aa11.05□□□□□ -0.64
SKA2-205ENST00000580541 HYLS1Q96M11 299 aa11.05□□□□□ -0.64
SKA2-205ENST00000580541 AQP10Q96PS8 301 aa11.05□□□□□ -0.64
SKA2-205ENST00000580541 MDFIQ99750 246 aa11.05□□□□□ -0.64
SKA2-205ENST00000580541 UQCC1Q9NVA1 299 aa11.05□□□□□ -0.64
SKA2-205ENST00000580541 HSPB11Q9Y547 144 aa11.05□□□□□ -0.64
SKA2-205ENST00000580541 SMCO3A2RU48 225 aa11.04□□□□□ -0.64
SKA2-205ENST00000580541 OR2T8A6NH00 312 aa11.04□□□□□ -0.64
SKA2-205ENST00000580541 PRSS46E5RG02 174 aa11.04□□□□□ -0.64
SKA2-205ENST00000580541 CCL24O00175 119 aa11.04□□□□□ -0.64
SKA2-205ENST00000580541 TGOLN2O43493 480 aa11.04□□□□□ -0.64
SKA2-205ENST00000580541 IGHV3-23P01764 117 aa11.04□□□□□ -0.64
SKA2-205ENST00000580541 GPR183P32249 361 aa11.04□□□□□ -0.64
SKA2-205ENST00000580541 RPEL1Q2QD12 228 aa11.04□□□□□ -0.64
SKA2-205ENST00000580541 Q5BKY6 102 aa11.04□□□□□ -0.64
SKA2-205ENST00000580541 C8orf86Q6ZUL3 223 aa11.04□□□□□ -0.64
SKA2-205ENST00000580541 TMEM144Q7Z5S9 345 aa11.04□□□□□ -0.64
SKA2-205ENST00000580541 OR11H1Q8NG94 326 aa11.04□□□□□ -0.64
SKA2-205ENST00000580541 OR5C1Q8NGR4 320 aa11.04□□□□□ -0.64
SKA2-205ENST00000580541 SPATA3Q8NHX4 192 aa11.04□□□□□ -0.64
SKA2-205ENST00000580541 TMEM147Q9BVK8 224 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 302.1 ms