RNA–Protein interactions for RNA: ENST00000580104.5

TRAPPC8-207, Transcript of trafficking protein particle complex 8, humanhuman

TSL 2

Gene TRAPPC8, Length 5,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-207ENST00000580104 POLR3KQ9Y2Y1 108 aaPredicted RBP11.27□□□□□ -0.61
TRAPPC8-207ENST00000580104 RPL7P18124 248 aaKnown RBP11.27□□□□□ -0.61
TRAPPC8-207ENST00000580104 MBNL2Q5VZF2 373 aaKnown RBP11.27□□□□□ -0.61
TRAPPC8-207ENST00000580104 Q6ZS49 121 aa11.27□□□□□ -0.61
TRAPPC8-207ENST00000580104 ASCL5Q7RTU5 278 aa11.27□□□□□ -0.61
TRAPPC8-207ENST00000580104 TMEM208Q9BTX3 173 aa11.27□□□□□ -0.61
TRAPPC8-207ENST00000580104 SPRR3Q9UBC9 169 aa11.27□□□□□ -0.61
TRAPPC8-207ENST00000580104 ETV2O00321 342 aaPredicted RBP11.27□□□□□ -0.61
TRAPPC8-207ENST00000580104 GLRXP35754 106 aa11.27□□□□□ -0.61
TRAPPC8-207ENST00000580104 OR2T8A6NH00 312 aa11.26□□□□□ -0.61
TRAPPC8-207ENST00000580104 C10orf55Q5SWW7 151 aa11.26□□□□□ -0.61
TRAPPC8-207ENST00000580104 COQ2Q96H96 371 aa11.26□□□□□ -0.61
TRAPPC8-207ENST00000580104 IGHV3OR16-8A0A075B7F1 116 aa11.26□□□□□ -0.61
TRAPPC8-207ENST00000580104 IL4P05112 153 aa11.26□□□□□ -0.61
TRAPPC8-207ENST00000580104 CDKN1AP38936 164 aa11.26□□□□□ -0.61
TRAPPC8-207ENST00000580104 SRSF9Q13242 221 aaKnown RBP eCLIP11.26□□□□□ -0.61
TRAPPC8-207ENST00000580104 SPANXN1Q5VSR9 72 aa11.26□□□□□ -0.61
TRAPPC8-207ENST00000580104 TMEM136Q6ZRR5 245 aa11.26□□□□□ -0.61
TRAPPC8-207ENST00000580104 OSR1Q8TAX0 266 aaPredicted RBP11.26□□□□□ -0.61
TRAPPC8-207ENST00000580104 MYOZ3Q8TDC0 251 aa11.26□□□□□ -0.61
TRAPPC8-207ENST00000580104 RAB1CQ92928 201 aa11.26□□□□□ -0.61
TRAPPC8-207ENST00000580104 RPP21Q9H633 154 aaKnown RBP11.26□□□□□ -0.61
TRAPPC8-207ENST00000580104 NOTCH3Q9UM47 2321 aa11.26□□□□□ -0.61
TRAPPC8-207ENST00000580104 UPK2O00526 184 aa11.26□□□□□ -0.61
TRAPPC8-207ENST00000580104 COL6A6A6NMZ7 2263 aa11.26□□□□□ -0.61
TRAPPC8-207ENST00000580104 USF3Q68DE3 2245 aa11.26□□□□□ -0.61
TRAPPC8-207ENST00000580104 LGALS7P47929 136 aa11.25□□□□□ -0.61
TRAPPC8-207ENST00000580104 MLANAQ16655 118 aa11.25□□□□□ -0.61
TRAPPC8-207ENST00000580104 HAPLN4Q86UW8 402 aa11.25□□□□□ -0.61
TRAPPC8-207ENST00000580104 OR4A5Q8NH83 315 aa11.25□□□□□ -0.61
TRAPPC8-207ENST00000580104 IGHV3OR16-13A0A075B7E8 117 aa11.25□□□□□ -0.61
TRAPPC8-207ENST00000580104 IGHV3-74A0A0B4J1X5 117 aa11.25□□□□□ -0.61
TRAPPC8-207ENST00000580104 MGPP08493 103 aa11.25□□□□□ -0.61
TRAPPC8-207ENST00000580104 FABP2P12104 132 aa11.25□□□□□ -0.61
TRAPPC8-207ENST00000580104 FOXC1Q12948 553 aa11.25□□□□□ -0.61
TRAPPC8-207ENST00000580104 COL25A1Q9BXS0 654 aaPredicted RBP11.25□□□□□ -0.61
TRAPPC8-207ENST00000580104 FBXL15Q9H469 300 aa11.25□□□□□ -0.61
TRAPPC8-207ENST00000580104 TRAV9-2A0A087WT02 112 aa11.25□□□□□ -0.61
TRAPPC8-207ENST00000580104 C7orf71A4D174 169 aa11.25□□□□□ -0.61
TRAPPC8-207ENST00000580104 FOXI3A8MTJ6 420 aaPredicted RBP11.25□□□□□ -0.61
TRAPPC8-207ENST00000580104 TDGF1P3P51864 188 aa11.25□□□□□ -0.61
TRAPPC8-207ENST00000580104 TMEM186Q96B77 213 aa11.25□□□□□ -0.61
TRAPPC8-207ENST00000580104 GPR82Q96P67 336 aa11.25□□□□□ -0.61
TRAPPC8-207ENST00000580104 SLC25A33Q9BSK2 321 aa11.25□□□□□ -0.61
TRAPPC8-207ENST00000580104 PROK2Q9HC23 129 aa11.25□□□□□ -0.61
TRAPPC8-207ENST00000580104 TRBV6-6A0A0A6YYG2 114 aa11.24□□□□□ -0.61
TRAPPC8-207ENST00000580104 C3orf79P0CE67 100 aa11.24□□□□□ -0.61
TRAPPC8-207ENST00000580104 UNQ6494/PRO21346Q6UXR6 183 aa11.24□□□□□ -0.61
TRAPPC8-207ENST00000580104 CD177Q8N6Q3 437 aa11.24□□□□□ -0.61
TRAPPC8-207ENST00000580104 KLK15Q9H2R5 256 aa11.24□□□□□ -0.61
TRAPPC8-207ENST00000580104 GP6Q9HCN6 339 aa11.24□□□□□ -0.61
TRAPPC8-207ENST00000580104 LINC00479Q96M42 142 aa11.24□□□□□ -0.61
TRAPPC8-207ENST00000580104 TICRRQ7Z2Z1 1910 aa11.24□□□□□ -0.61
TRAPPC8-207ENST00000580104 A0A1W2PRE2 83 aa11.24□□□□□ -0.61
TRAPPC8-207ENST00000580104 ZNF788Q6ZQV5 615 aa11.24□□□□□ -0.61
TRAPPC8-207ENST00000580104 KIR3DL3Q8N743 410 aa11.24□□□□□ -0.61
TRAPPC8-207ENST00000580104 ZNF114Q8NC26 417 aa11.24□□□□□ -0.61
TRAPPC8-207ENST00000580104 PCNX3Q9H6A9 2034 aa11.24□□□□□ -0.61
TRAPPC8-207ENST00000580104 ZNF503-AS2A6NEH8 195 aa11.24□□□□□ -0.61
TRAPPC8-207ENST00000580104 NTN3O00634 580 aaPredicted RBP11.24□□□□□ -0.61
TRAPPC8-207ENST00000580104 GFRA3O60609 400 aa11.24□□□□□ -0.61
TRAPPC8-207ENST00000580104 C2orf83Q53S99 150 aa11.24□□□□□ -0.61
TRAPPC8-207ENST00000580104 NIT1Q86X76 327 aa11.24□□□□□ -0.61
TRAPPC8-207ENST00000580104 Q9H3A6 140 aa11.24□□□□□ -0.61
TRAPPC8-207ENST00000580104 LPAR2Q9HBW0 351 aa11.24□□□□□ -0.61
TRAPPC8-207ENST00000580104 YLPM1P49750 1951 aaKnown RBP11.24□□□□□ -0.61
TRAPPC8-207ENST00000580104 FREM1Q5H8C1 2179 aa11.23□□□□□ -0.61
TRAPPC8-207ENST00000580104 CACNA1BQ00975 2339 aa11.23□□□□□ -0.61
TRAPPC8-207ENST00000580104 A0A1B0GUT8 65 aa11.23□□□□□ -0.61
TRAPPC8-207ENST00000580104 CD69Q07108 199 aa11.23□□□□□ -0.61
TRAPPC8-207ENST00000580104 DNLZQ5SXM8 178 aa11.23□□□□□ -0.61
TRAPPC8-207ENST00000580104 KHDC1LQ5JSQ8 128 aa11.23□□□□□ -0.61
TRAPPC8-207ENST00000580104 COLQQ9Y215 455 aaPredicted RBP11.23□□□□□ -0.61
TRAPPC8-207ENST00000580104 CIDEAO60543 219 aa11.23□□□□□ -0.61
TRAPPC8-207ENST00000580104 IGHV3-23P01764 117 aa11.23□□□□□ -0.61
TRAPPC8-207ENST00000580104 FBLN7Q53RD9 439 aa11.23□□□□□ -0.61
TRAPPC8-207ENST00000580104 OR10J3Q5JRS4 329 aa11.23□□□□□ -0.61
TRAPPC8-207ENST00000580104 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.23□□□□□ -0.61
TRAPPC8-207ENST00000580104 NUDT10Q8NFP7 164 aa11.23□□□□□ -0.61
TRAPPC8-207ENST00000580104 CACNG8Q8WXS5 425 aa11.23□□□□□ -0.61
TRAPPC8-207ENST00000580104 NUDT11Q96G61 164 aa11.23□□□□□ -0.61
TRAPPC8-207ENST00000580104 DOPEY2Q9Y3R5 2298 aa11.23□□□□□ -0.61
TRAPPC8-207ENST00000580104 M0QZ24 198 aa11.23□□□□□ -0.61
TRAPPC8-207ENST00000580104 IGLV3-1P01715 115 aa11.23□□□□□ -0.61
TRAPPC8-207ENST00000580104 FTH1P19P0C7X4 201 aa11.23□□□□□ -0.61
TRAPPC8-207ENST00000580104 MCRIP2Q9BUT9 160 aaKnown RBP11.23□□□□□ -0.61
TRAPPC8-207ENST00000580104 RAB1BQ9H0U4 201 aa11.23□□□□□ -0.61
TRAPPC8-207ENST00000580104 PEF1Q9UBV8 284 aaKnown RBP11.23□□□□□ -0.61
TRAPPC8-207ENST00000580104 ATP5IP56385 69 aaPredicted RBP11.22□□□□□ -0.61
TRAPPC8-207ENST00000580104 COLCA1Q6ZS62 124 aa11.22□□□□□ -0.61
TRAPPC8-207ENST00000580104 TMEM265A0A087WTH1 108 aa11.22□□□□□ -0.61
TRAPPC8-207ENST00000580104 GOSR1O95249 250 aa11.22□□□□□ -0.61
TRAPPC8-207ENST00000580104 PRCDQ00LT1 54 aa11.22□□□□□ -0.61
TRAPPC8-207ENST00000580104 RELQ04864 619 aaPredicted RBP11.22□□□□□ -0.61
TRAPPC8-207ENST00000580104 LDLRAD2Q5SZI1 272 aa11.22□□□□□ -0.61
TRAPPC8-207ENST00000580104 RBPMS2Q6ZRY4 209 aaKnown RBP11.22□□□□□ -0.61
TRAPPC8-207ENST00000580104 ZNF502Q8TBZ5 544 aa11.22□□□□□ -0.61
TRAPPC8-207ENST00000580104 MLNRO43193 412 aa11.22□□□□□ -0.61
TRAPPC8-207ENST00000580104 GPX1P07203 203 aa11.22□□□□□ -0.61
TRAPPC8-207ENST00000580104 TIMM23BQ5SRD1 257 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms