RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 DCANP1Q8TF63 244 aa8.73□□□□□ -1.01
CDK5RAP3-216ENST00000579853 FAM212BQ9NTI7 297 aaPredicted RBP8.73□□□□□ -1.01
CDK5RAP3-216ENST00000579853 NACAE9PAV3 2078 aa8.73□□□□□ -1.01
CDK5RAP3-216ENST00000579853 TRAV18A0A075B6X5 111 aa8.72□□□□□ -1.01
CDK5RAP3-216ENST00000579853 HELTA6NFD8 242 aa8.72□□□□□ -1.01
CDK5RAP3-216ENST00000579853 TMEM50AO95807 157 aa8.72□□□□□ -1.01
CDK5RAP3-216ENST00000579853 IGHV3-48P01763 117 aa8.72□□□□□ -1.01
CDK5RAP3-216ENST00000579853 CRYBB3P26998 211 aa8.72□□□□□ -1.01
CDK5RAP3-216ENST00000579853 S100GP29377 79 aa8.72□□□□□ -1.01
CDK5RAP3-216ENST00000579853 SNCAP37840 140 aa8.72□□□□□ -1.01
CDK5RAP3-216ENST00000579853 P2RY1P47900 373 aa8.72□□□□□ -1.01
CDK5RAP3-216ENST00000579853 SNRPD3P62318 126 aaKnown RBP8.72□□□□□ -1.01
CDK5RAP3-216ENST00000579853 PRCDQ00LT1 54 aa8.72□□□□□ -1.01
CDK5RAP3-216ENST00000579853 DHRS11Q6UWP2 260 aa8.72□□□□□ -1.01
CDK5RAP3-216ENST00000579853 OR4A16Q8NH70 328 aa8.72□□□□□ -1.01
CDK5RAP3-216ENST00000579853 RAB40CQ96S21 281 aa8.72□□□□□ -1.01
CDK5RAP3-216ENST00000579853 SCRT1Q9BWW7 348 aa8.72□□□□□ -1.01
CDK5RAP3-216ENST00000579853 SEPSECSQ9HD40 501 aaKnown RBP8.72□□□□□ -1.01
CDK5RAP3-216ENST00000579853 A0A1B0GU03 582 aa8.71□□□□□ -1.02
CDK5RAP3-216ENST00000579853 HSPE1P61604 102 aaKnown RBP8.71□□□□□ -1.02
CDK5RAP3-216ENST00000579853 DHRS2Q13268 280 aa8.71□□□□□ -1.02
CDK5RAP3-216ENST00000579853 OXA1LQ15070 435 aa8.71□□□□□ -1.02
CDK5RAP3-216ENST00000579853 H2BFWTQ7Z2G1 175 aa8.71□□□□□ -1.02
CDK5RAP3-216ENST00000579853 LGALS14Q8TCE9 139 aa8.71□□□□□ -1.02
CDK5RAP3-216ENST00000579853 XCL2Q9UBD3 114 aa8.71□□□□□ -1.02
CDK5RAP3-216ENST00000579853 DBX1A6NMT0 343 aa8.7□□□□□ -1.02
CDK5RAP3-216ENST00000579853 CORTO00230 105 aa8.7□□□□□ -1.02
CDK5RAP3-216ENST00000579853 GPR31O00270 319 aa8.7□□□□□ -1.02
CDK5RAP3-216ENST00000579853 HOXA1P49639 335 aaPredicted RBP8.7□□□□□ -1.02
CDK5RAP3-216ENST00000579853 SUB1P53999 127 aaKnown RBP eCLIP8.7□□□□□ -1.02
CDK5RAP3-216ENST00000579853 PSMG4Q5JS54 123 aa8.7□□□□□ -1.02
CDK5RAP3-216ENST00000579853 SFXN4Q6P4A7 337 aa8.7□□□□□ -1.02
CDK5RAP3-216ENST00000579853 ZNF705AQ6ZN79 300 aaPredicted RBP8.7□□□□□ -1.02
CDK5RAP3-216ENST00000579853 NIPSNAP3BQ9BS92 247 aa8.7□□□□□ -1.02
CDK5RAP3-216ENST00000579853 AUNIPQ9H7T9 357 aa8.7□□□□□ -1.02
CDK5RAP3-216ENST00000579853 DIABLOQ9NR28 239 aa8.7□□□□□ -1.02
CDK5RAP3-216ENST00000579853 EHFQ9NZC4 300 aa8.7□□□□□ -1.02
CDK5RAP3-216ENST00000579853 BLOC1S6Q9UL45 172 aa8.7□□□□□ -1.02
CDK5RAP3-216ENST00000579853 RRP15Q9Y3B9 282 aaKnown RBP8.7□□□□□ -1.02
CDK5RAP3-216ENST00000579853 TMED3Q9Y3Q3 217 aa8.7□□□□□ -1.02
CDK5RAP3-216ENST00000579853 RFNGQ9Y644 331 aa8.7□□□□□ -1.02
CDK5RAP3-216ENST00000579853 SMIM30A4D0T7 59 aa8.69□□□□□ -1.02
CDK5RAP3-216ENST00000579853 ZNF705FA8MVS1 300 aaPredicted RBP8.69□□□□□ -1.02
CDK5RAP3-216ENST00000579853 EBAG9O00559 213 aa8.69□□□□□ -1.02
CDK5RAP3-216ENST00000579853 ZNF705DP0CH99 300 aaPredicted RBP8.69□□□□□ -1.02
CDK5RAP3-216ENST00000579853 ZNF705BP0CI00 300 aaPredicted RBP8.69□□□□□ -1.02
CDK5RAP3-216ENST00000579853 LPCAT3Q6P1A2 487 aa8.69□□□□□ -1.02
CDK5RAP3-216ENST00000579853 C15orf53Q8NAA6 179 aa8.69□□□□□ -1.02
CDK5RAP3-216ENST00000579853 TMEM230Q96A57 120 aa8.69□□□□□ -1.02
CDK5RAP3-216ENST00000579853 SEC22AQ96IW7 307 aa8.69□□□□□ -1.02
CDK5RAP3-216ENST00000579853 ZNF2Q9BSG1 426 aaPredicted RBP8.69□□□□□ -1.02
CDK5RAP3-216ENST00000579853 SCRT2Q9NQ03 307 aa8.69□□□□□ -1.02
CDK5RAP3-216ENST00000579853 IFT46Q9NQC8 304 aa8.69□□□□□ -1.02
CDK5RAP3-216ENST00000579853 TRAV30A0A087WSZ9 112 aa8.68□□□□□ -1.02
CDK5RAP3-216ENST00000579853 INS-IGF2F8WCM5 200 aa8.68□□□□□ -1.02
CDK5RAP3-216ENST00000579853 H3BMM0 161 aa8.68□□□□□ -1.02
CDK5RAP3-216ENST00000579853 CLN5O75503 358 aa8.68□□□□□ -1.02
CDK5RAP3-216ENST00000579853 EMP1P54849 157 aa8.68□□□□□ -1.02
CDK5RAP3-216ENST00000579853 TNP2Q05952 138 aa8.68□□□□□ -1.02
CDK5RAP3-216ENST00000579853 TXNL4BQ9NX01 149 aaKnown RBP8.68□□□□□ -1.02
CDK5RAP3-216ENST00000579853 DKK2Q9UBU2 259 aa8.68□□□□□ -1.02
CDK5RAP3-216ENST00000579853 MYCBP2O75592 4640 aa8.68□□□□□ -1.02
CDK5RAP3-216ENST00000579853 FCER2P06734 321 aa8.67□□□□□ -1.02
CDK5RAP3-216ENST00000579853 HLA-DRB4P13762 266 aa8.67□□□□□ -1.02
CDK5RAP3-216ENST00000579853 RFX2P48378 723 aa8.67□□□□□ -1.02
CDK5RAP3-216ENST00000579853 PPP5CP53041 499 aa8.67□□□□□ -1.02
CDK5RAP3-216ENST00000579853 TAS2R46P59540 309 aa8.67□□□□□ -1.02
CDK5RAP3-216ENST00000579853 C6orf223Q8N319 242 aa8.67□□□□□ -1.02
CDK5RAP3-216ENST00000579853 OR6F1Q8NGZ6 308 aa8.67□□□□□ -1.02
CDK5RAP3-216ENST00000579853 OR4X1Q8NH49 305 aa8.67□□□□□ -1.02
CDK5RAP3-216ENST00000579853 ATG101Q9BSB4 218 aa8.67□□□□□ -1.02
CDK5RAP3-216ENST00000579853 HLA-DRB4X5D2U9 266 aa8.67□□□□□ -1.02
CDK5RAP3-216ENST00000579853 NBDYA0A0U1RRE5 68 aa8.66□□□□□ -1.02
CDK5RAP3-216ENST00000579853 FAM90A26D6RGX4 464 aa8.66□□□□□ -1.02
CDK5RAP3-216ENST00000579853 RPL5P46777 297 aaKnown RBP8.66□□□□□ -1.02
CDK5RAP3-216ENST00000579853 FAM222AQ5U5X8 452 aa8.66□□□□□ -1.02
CDK5RAP3-216ENST00000579853 C16orf54Q6UWD8 224 aa8.66□□□□□ -1.02
CDK5RAP3-216ENST00000579853 SLC35G3Q8N808 338 aa8.66□□□□□ -1.02
CDK5RAP3-216ENST00000579853 OR5H2Q8NGV7 314 aa8.66□□□□□ -1.02
CDK5RAP3-216ENST00000579853 SLC25A38Q96DW6 304 aa8.66□□□□□ -1.02
CDK5RAP3-216ENST00000579853 PDCD10Q9BUL8 212 aa8.66□□□□□ -1.02
CDK5RAP3-216ENST00000579853 YTHDF1Q9BYJ9 559 aaKnown RBP8.66□□□□□ -1.02
CDK5RAP3-216ENST00000579853 NRN1Q9NPD7 142 aa8.66□□□□□ -1.02
CDK5RAP3-216ENST00000579853 SSR3Q9UNL2 185 aa8.66□□□□□ -1.02
CDK5RAP3-216ENST00000579853 U3KQE9 123 aa8.66□□□□□ -1.02
CDK5RAP3-216ENST00000579853 GSTZ1O43708 216 aaPredicted RBP8.65□□□□□ -1.02
CDK5RAP3-216ENST00000579853 TMEM127O75204 238 aa8.65□□□□□ -1.02
CDK5RAP3-216ENST00000579853 HNRNPCP07910 306 aaKnown RBP eCLIP8.65□□□□□ -1.02
CDK5RAP3-216ENST00000579853 HTN3P15516 51 aa8.65□□□□□ -1.02
CDK5RAP3-216ENST00000579853 OPRK1P41145 380 aa8.65□□□□□ -1.02
CDK5RAP3-216ENST00000579853 NKX2-1P43699 371 aaPredicted RBP8.65□□□□□ -1.02
CDK5RAP3-216ENST00000579853 TMEM88Q6PEY1 159 aa8.65□□□□□ -1.02
CDK5RAP3-216ENST00000579853 GSG1LQ6UXU4 331 aa8.65□□□□□ -1.02
CDK5RAP3-216ENST00000579853 Q8WTZ3 238 aa8.65□□□□□ -1.02
CDK5RAP3-216ENST00000579853 GLMPQ8WWB7 406 aa8.65□□□□□ -1.02
CDK5RAP3-216ENST00000579853 CLUHP3Q96NS8 147 aa8.65□□□□□ -1.02
CDK5RAP3-216ENST00000579853 FAT1Q14517 4588 aa8.64□□□□□ -1.03
CDK5RAP3-216ENST00000579853 IGHV3OR16-12A0A075B7B8 117 aa8.64□□□□□ -1.03
CDK5RAP3-216ENST00000579853 RPS10-NUDT3A0A1W2PQS6 291 aa8.64□□□□□ -1.03
CDK5RAP3-216ENST00000579853 MEIS3P1A6NDR6 274 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms