RNA–Protein interactions for RNA: ENST00000578789.1

MKS1-207, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-207ENST00000578789 DAZ1Q9NQZ3 744 aaKnown RBP10.92□□□□□ -0.66
MKS1-207ENST00000578789 MRPL27Q9P0M9 148 aaKnown RBP10.92□□□□□ -0.66
MKS1-207ENST00000578789 TMED3Q9Y3Q3 217 aa10.92□□□□□ -0.66
MKS1-207ENST00000578789 C9orf170A2RU37 121 aa10.91□□□□□ -0.66
MKS1-207ENST00000578789 GNG7O60262 68 aa10.91□□□□□ -0.66
MKS1-207ENST00000578789 NXPH3O95157 252 aa10.91□□□□□ -0.66
MKS1-207ENST00000578789 IGHV3-48P01763 117 aa10.91□□□□□ -0.66
MKS1-207ENST00000578789 OR4E1P0C645 316 aa10.91□□□□□ -0.66
MKS1-207ENST00000578789 CD69Q07108 199 aa10.91□□□□□ -0.66
MKS1-207ENST00000578789 DHRS2Q13268 280 aa10.91□□□□□ -0.66
MKS1-207ENST00000578789 C11orf87Q6NUJ2 197 aa10.91□□□□□ -0.66
MKS1-207ENST00000578789 UXS1Q8NBZ7 420 aa10.91□□□□□ -0.66
MKS1-207ENST00000578789 OR1S1Q8NH92 325 aa10.91□□□□□ -0.66
MKS1-207ENST00000578789 TMEM170AQ8WVE7 144 aa10.91□□□□□ -0.66
MKS1-207ENST00000578789 HIPK2Q9H2X6 1198 aa10.91□□□□□ -0.66
MKS1-207ENST00000578789 RBKSQ9H477 322 aa10.91□□□□□ -0.66
MKS1-207ENST00000578789 BATF3Q9NR55 127 aa10.91□□□□□ -0.66
MKS1-207ENST00000578789 MLXQ9UH92 298 aa10.91□□□□□ -0.66
MKS1-207ENST00000578789 C15orf62A8K5M9 175 aa10.9□□□□□ -0.66
MKS1-207ENST00000578789 ZNF785A8K8V0 405 aa10.9□□□□□ -0.66
MKS1-207ENST00000578789 A8MZ25 164 aa10.9□□□□□ -0.66
MKS1-207ENST00000578789 FAM90A26D6RGX4 464 aa10.9□□□□□ -0.66
MKS1-207ENST00000578789 K7EMT4 169 aa10.9□□□□□ -0.66
MKS1-207ENST00000578789 NPY1RP25929 384 aa10.9□□□□□ -0.66
MKS1-207ENST00000578789 OPRK1P41145 380 aa10.9□□□□□ -0.66
MKS1-207ENST00000578789 LYG2Q86SG7 212 aa10.9□□□□□ -0.66
MKS1-207ENST00000578789 OR4X1Q8NH49 305 aa10.9□□□□□ -0.66
MKS1-207ENST00000578789 RNASEH2CQ8TDP1 164 aaKnown RBP10.9□□□□□ -0.66
MKS1-207ENST00000578789 DTD1Q8TEA8 209 aa10.9□□□□□ -0.66
MKS1-207ENST00000578789 MRPL36Q9P0J6 103 aaKnown RBP10.9□□□□□ -0.66
MKS1-207ENST00000578789 RPS10-NUDT3A0A1W2PQS6 291 aa10.89□□□□□ -0.67
MKS1-207ENST00000578789 CLN5O75503 358 aa10.89□□□□□ -0.67
MKS1-207ENST00000578789 ANXA7P20073 488 aaKnown RBP10.89□□□□□ -0.67
MKS1-207ENST00000578789 GGNBP1Q5YKI7 109 aa10.89□□□□□ -0.67
MKS1-207ENST00000578789 BTNL8Q6UX41 500 aa10.89□□□□□ -0.67
MKS1-207ENST00000578789 GTSCR1Q86UQ5 136 aa10.89□□□□□ -0.67
MKS1-207ENST00000578789 NOXA1Q86UR1 476 aa10.89□□□□□ -0.67
MKS1-207ENST00000578789 TMEM61Q8N0U2 210 aa10.89□□□□□ -0.67
MKS1-207ENST00000578789 COQ8AQ8NI60 647 aa10.89□□□□□ -0.67
MKS1-207ENST00000578789 OR10C1Q96KK4 312 aa10.89□□□□□ -0.67
MKS1-207ENST00000578789 WDR12Q9GZL7 423 aaKnown RBP10.89□□□□□ -0.67
MKS1-207ENST00000578789 C20orf85Q9H1P6 137 aa10.89□□□□□ -0.67
MKS1-207ENST00000578789 U3KQ87 197 aa10.89□□□□□ -0.67
MKS1-207ENST00000578789 TRAV25A0A0B4J276 109 aa10.88□□□□□ -0.67
MKS1-207ENST00000578789 TMEM50AO95807 157 aa10.88□□□□□ -0.67
MKS1-207ENST00000578789 HOXB5P09067 269 aa10.88□□□□□ -0.67
MKS1-207ENST00000578789 IGHV4-30-4P0DP06 118 aa10.88□□□□□ -0.67
MKS1-207ENST00000578789 SLC25A4P12235 298 aa10.88□□□□□ -0.67
MKS1-207ENST00000578789 ATP5IP56385 69 aaPredicted RBP10.88□□□□□ -0.67
MKS1-207ENST00000578789 ZNF600Q6ZNG1 722 aa10.88□□□□□ -0.67
MKS1-207ENST00000578789 WDR89Q96FK6 387 aaPredicted RBP10.88□□□□□ -0.67
MKS1-207ENST00000578789 C20orf24Q9BUV8 137 aa10.88□□□□□ -0.67
MKS1-207ENST00000578789 C19orf73Q9NVV2 129 aa10.88□□□□□ -0.67
MKS1-207ENST00000578789 COL7A1Q02388 2944 aa10.87□□□□□ -0.67
MKS1-207ENST00000578789 IGHV3OR16-8A0A075B7F1 116 aa10.87□□□□□ -0.67
MKS1-207ENST00000578789 SCGB2A1O75556 95 aa10.87□□□□□ -0.67
MKS1-207ENST00000578789 IFNA10P01566 189 aa10.87□□□□□ -0.67
MKS1-207ENST00000578789 TCRBP04435 133 aa10.87□□□□□ -0.67
MKS1-207ENST00000578789 FRMD6-AS1P0C7T7 363 aa10.87□□□□□ -0.67
MKS1-207ENST00000578789 NHLRC4P0CG21 123 aaPredicted RBP10.87□□□□□ -0.67
MKS1-207ENST00000578789 ZNF846Q147U1 533 aa10.87□□□□□ -0.67
MKS1-207ENST00000578789 MLANAQ16655 118 aa10.87□□□□□ -0.67
MKS1-207ENST00000578789 C4orf46Q504U0 113 aa10.87□□□□□ -0.67
MKS1-207ENST00000578789 PRSS54Q6PEW0 395 aa10.87□□□□□ -0.67
MKS1-207ENST00000578789 TMEM116Q8NCL8 245 aa10.87□□□□□ -0.67
MKS1-207ENST00000578789 ZFAND3Q9H8U3 227 aa10.87□□□□□ -0.67
MKS1-207ENST00000578789 TBC1D24Q9ULP9 559 aa10.87□□□□□ -0.67
MKS1-207ENST00000578789 TRAV30A0A087WSZ9 112 aa10.86□□□□□ -0.67
MKS1-207ENST00000578789 MED6O75586 246 aa10.86□□□□□ -0.67
MKS1-207ENST00000578789 ADAP1O75689 374 aa10.86□□□□□ -0.67
MKS1-207ENST00000578789 CD81P60033 236 aa10.86□□□□□ -0.67
MKS1-207ENST00000578789 ASAH1Q13510 395 aa10.86□□□□□ -0.67
MKS1-207ENST00000578789 GUCA2BQ16661 112 aa10.86□□□□□ -0.67
MKS1-207ENST00000578789 ETFRF1Q6IPR1 90 aa10.86□□□□□ -0.67
MKS1-207ENST00000578789 TOMM20LQ6UXN7 152 aa10.86□□□□□ -0.67
MKS1-207ENST00000578789 MITD1Q8WV92 249 aa10.86□□□□□ -0.67
MKS1-207ENST00000578789 NEURL2Q9BR09 285 aa10.86□□□□□ -0.67
MKS1-207ENST00000578789 SMPXQ9UHP9 88 aa10.86□□□□□ -0.67
MKS1-207ENST00000578789 IGHV7-4-1A0A0J9YVY3 117 aa10.85□□□□□ -0.67
MKS1-207ENST00000578789 ZNF207O43670 478 aaKnown RBP10.85□□□□□ -0.67
MKS1-207ENST00000578789 UPK1BO75841 260 aa10.85□□□□□ -0.67
MKS1-207ENST00000578789 YIF1AO95070 293 aa10.85□□□□□ -0.67
MKS1-207ENST00000578789 IGKV1-17P01599 117 aa10.85□□□□□ -0.67
MKS1-207ENST00000578789 CD7P09564 240 aa10.85□□□□□ -0.67
MKS1-207ENST00000578789 IGLC1P0CG04 106 aa10.85□□□□□ -0.67
MKS1-207ENST00000578789 RND2P52198 227 aa10.85□□□□□ -0.67
MKS1-207ENST00000578789 SLC16A13Q7RTY0 426 aa10.85□□□□□ -0.67
MKS1-207ENST00000578789 OR52B4Q8NGK2 314 aa10.85□□□□□ -0.67
MKS1-207ENST00000578789 OR1S2Q8NGQ3 325 aa10.85□□□□□ -0.67
MKS1-207ENST00000578789 CIB3Q96Q77 187 aaPredicted RBP10.85□□□□□ -0.67
MKS1-207ENST00000578789 SPAG8Q99932 426 aaPredicted RBP10.85□□□□□ -0.67
MKS1-207ENST00000578789 GINS3Q9BRX5 216 aa10.85□□□□□ -0.67
MKS1-207ENST00000578789 NUDT15Q9NV35 164 aa10.85□□□□□ -0.67
MKS1-207ENST00000578789 PUS1Q9Y606 427 aaKnown RBP eCLIP10.85□□□□□ -0.67
MKS1-207ENST00000578789 SELENOKQ9Y6D0 94 aa10.85□□□□□ -0.67
MKS1-207ENST00000578789 TRAV14DV4A0A0A6YYC5 116 aa10.84□□□□□ -0.67
MKS1-207ENST00000578789 MPTX1A8MV57 137 aa10.84□□□□□ -0.67
MKS1-207ENST00000578789 CHEK1O14757 476 aa10.84□□□□□ -0.67
MKS1-207ENST00000578789 TSPAN4O14817 238 aa10.84□□□□□ -0.67
MKS1-207ENST00000578789 SYNGR2O43760 224 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms