RNA–Protein interactions for RNA: ENST00000578547.1

IFT20-207, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best)

Gene IFT20, Length 962 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-207ENST00000578547 SLC16A13Q7RTY0 426 aa9.4□□□□□ -0.9
IFT20-207ENST00000578547 NDUFA11Q86Y39 141 aa9.4□□□□□ -0.9
IFT20-207ENST00000578547 TMEM217Q8N7C4 229 aa9.4□□□□□ -0.9
IFT20-207ENST00000578547 SPATA3Q8NHX4 192 aa9.4□□□□□ -0.9
IFT20-207ENST00000578547 VN1R17PQ8TDU5 208 aa9.4□□□□□ -0.9
IFT20-207ENST00000578547 C4orf3Q8WVX3 66 aa9.4□□□□□ -0.9
IFT20-207ENST00000578547 ACY3Q96HD9 319 aa9.4□□□□□ -0.9
IFT20-207ENST00000578547 ST6GAL2Q96JF0 529 aa9.4□□□□□ -0.9
IFT20-207ENST00000578547 CCDC140Q96MF4 163 aa9.4□□□□□ -0.9
IFT20-207ENST00000578547 C21orf62Q9NYP8 219 aa9.4□□□□□ -0.9
IFT20-207ENST00000578547 KLK9Q9UKQ9 250 aa9.4□□□□□ -0.9
IFT20-207ENST00000578547 TRBV7-1A0A0A6YYK4 115 aa9.39□□□□□ -0.91
IFT20-207ENST00000578547 SMCO3A2RU48 225 aa9.39□□□□□ -0.91
IFT20-207ENST00000578547 OR2T8A6NH00 312 aa9.39□□□□□ -0.91
IFT20-207ENST00000578547 TRBV12-3P01733 135 aa9.39□□□□□ -0.91
IFT20-207ENST00000578547 GPR183P32249 361 aa9.39□□□□□ -0.91
IFT20-207ENST00000578547 EWSR1Q01844 656 aaKnown RBP eCLIP9.39□□□□□ -0.91
IFT20-207ENST00000578547 CD69Q07108 199 aa9.39□□□□□ -0.91
IFT20-207ENST00000578547 SLC38A11Q08AI6 406 aa9.39□□□□□ -0.91
IFT20-207ENST00000578547 ETFRF1Q6IPR1 90 aa9.39□□□□□ -0.91
IFT20-207ENST00000578547 CLEC19AQ6UXS0 136 aa9.39□□□□□ -0.91
IFT20-207ENST00000578547 ACOT7LQ6ZUV0 252 aa9.39□□□□□ -0.91
IFT20-207ENST00000578547 HAPLN4Q86UW8 402 aa9.39□□□□□ -0.91
IFT20-207ENST00000578547 TMEM252Q8N6L7 170 aa9.39□□□□□ -0.91
IFT20-207ENST00000578547 OR10P1Q8NGE3 313 aa9.39□□□□□ -0.91
IFT20-207ENST00000578547 ZNF502Q8TBZ5 544 aa9.39□□□□□ -0.91
IFT20-207ENST00000578547 SLC35E1Q96K37 410 aa9.39□□□□□ -0.91
IFT20-207ENST00000578547 DUX3Q96PT4 197 aa9.39□□□□□ -0.91
IFT20-207ENST00000578547 SLC25A31Q9H0C2 315 aa9.39□□□□□ -0.91
IFT20-207ENST00000578547 MRPL36Q9P0J6 103 aaKnown RBP9.39□□□□□ -0.91
IFT20-207ENST00000578547 PMS2P5A8MQ11 134 aa9.38□□□□□ -0.91
IFT20-207ENST00000578547 ADARB2-AS1A8MUL3 147 aa9.38□□□□□ -0.91
IFT20-207ENST00000578547 PRSS46E5RG02 174 aa9.38□□□□□ -0.91
IFT20-207ENST00000578547 PPP5D1E7EU14 171 aa9.38□□□□□ -0.91
IFT20-207ENST00000578547 G3V3Q6 166 aa9.38□□□□□ -0.91
IFT20-207ENST00000578547 LYL1P12980 280 aa9.38□□□□□ -0.91
IFT20-207ENST00000578547 RPL12P30050 165 aaKnown RBP9.38□□□□□ -0.91
IFT20-207ENST00000578547 NUP62P37198 522 aaPredicted RBP9.38□□□□□ -0.91
IFT20-207ENST00000578547 SULT1A1P50225 295 aa9.38□□□□□ -0.91
IFT20-207ENST00000578547 RND2P52198 227 aa9.38□□□□□ -0.91
IFT20-207ENST00000578547 MFAP4P55083 255 aa9.38□□□□□ -0.91
IFT20-207ENST00000578547 ARL16Q0P5N6 197 aa9.38□□□□□ -0.91
IFT20-207ENST00000578547 ZNF343Q6P1L6 599 aa9.38□□□□□ -0.91
IFT20-207ENST00000578547 LILRB2Q8N423 598 aa9.38□□□□□ -0.91
IFT20-207ENST00000578547 PEF1Q9UBV8 284 aaKnown RBP9.38□□□□□ -0.91
IFT20-207ENST00000578547 IGHV4OR15-8A0A075B7B6 117 aa9.37□□□□□ -0.91
IFT20-207ENST00000578547 A0A087WW49 117 aa9.37□□□□□ -0.91
IFT20-207ENST00000578547 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.37□□□□□ -0.91
IFT20-207ENST00000578547 I3L521 148 aa9.37□□□□□ -0.91
IFT20-207ENST00000578547 GNG7O60262 68 aa9.37□□□□□ -0.91
IFT20-207ENST00000578547 CLEC3BP05452 202 aa9.37□□□□□ -0.91
IFT20-207ENST00000578547 SLC25A4P12235 298 aa9.37□□□□□ -0.91
IFT20-207ENST00000578547 ARL3P36405 182 aa9.37□□□□□ -0.91
IFT20-207ENST00000578547 GPX4P36969 197 aaPredicted RBP9.37□□□□□ -0.91
IFT20-207ENST00000578547 NPBWR1P48145 328 aa9.37□□□□□ -0.91
IFT20-207ENST00000578547 HBG1P69891 147 aa9.37□□□□□ -0.91
IFT20-207ENST00000578547 HBG2P69892 147 aa9.37□□□□□ -0.91
IFT20-207ENST00000578547 NHLH2Q02577 135 aa9.37□□□□□ -0.91
IFT20-207ENST00000578547 AKR1C1Q04828 323 aa9.37□□□□□ -0.91
IFT20-207ENST00000578547 CD300CQ08708 224 aa9.37□□□□□ -0.91
IFT20-207ENST00000578547 ZNF546Q86UE3 836 aa9.37□□□□□ -0.91
IFT20-207ENST00000578547 TCTE3Q8IZS6 198 aa9.37□□□□□ -0.91
IFT20-207ENST00000578547 NPIPB3Q92617 1050 aa9.37□□□□□ -0.91
IFT20-207ENST00000578547 F8W735 103 aaPredicted RBP9.36□□□□□ -0.91
IFT20-207ENST00000578547 ARPC5O15511 151 aa9.36□□□□□ -0.91
IFT20-207ENST00000578547 SCAF4O95104 1147 aaKnown RBP9.36□□□□□ -0.91
IFT20-207ENST00000578547 AP2S1P53680 142 aaPredicted RBP9.36□□□□□ -0.91
IFT20-207ENST00000578547 DLK1P80370 383 aa9.36□□□□□ -0.91
IFT20-207ENST00000578547 RUNX1Q01196 453 aa9.36□□□□□ -0.91
IFT20-207ENST00000578547 BAXQ07812 192 aa9.36□□□□□ -0.91
IFT20-207ENST00000578547 GAMTQ14353 236 aa9.36□□□□□ -0.91
IFT20-207ENST00000578547 CLINT1Q14677 625 aa9.36□□□□□ -0.91
IFT20-207ENST00000578547 INO80EQ8NBZ0 244 aaPredicted RBP9.36□□□□□ -0.91
IFT20-207ENST00000578547 OR11H1Q8NG94 326 aa9.36□□□□□ -0.91
IFT20-207ENST00000578547 OR1S2Q8NGQ3 325 aa9.36□□□□□ -0.91
IFT20-207ENST00000578547 OR5C1Q8NGR4 320 aa9.36□□□□□ -0.91
IFT20-207ENST00000578547 OR1N2Q8NGR9 330 aa9.36□□□□□ -0.91
IFT20-207ENST00000578547 OR4X1Q8NH49 305 aa9.36□□□□□ -0.91
IFT20-207ENST00000578547 CACNG8Q8WXS5 425 aa9.36□□□□□ -0.91
IFT20-207ENST00000578547 DPF1Q92782 380 aa9.36□□□□□ -0.91
IFT20-207ENST00000578547 BSCL2Q96G97 398 aaPredicted RBP9.36□□□□□ -0.91
IFT20-207ENST00000578547 RAX2Q96IS3 184 aa9.36□□□□□ -0.91
IFT20-207ENST00000578547 SMIM3Q9BZL3 60 aa9.36□□□□□ -0.91
IFT20-207ENST00000578547 HSPB11Q9Y547 144 aa9.36□□□□□ -0.91
IFT20-207ENST00000578547 ANK2Q01484 3957 aa9.36□□□□□ -0.91
IFT20-207ENST00000578547 IGHV3-35A0A0C4DH35 117 aa9.35□□□□□ -0.91
IFT20-207ENST00000578547 UBE2L5PA0A1B0GUS4 154 aa9.35□□□□□ -0.91
IFT20-207ENST00000578547 LINC01619G3V211 115 aa9.35□□□□□ -0.91
IFT20-207ENST00000578547 CCL24O00175 119 aa9.35□□□□□ -0.91
IFT20-207ENST00000578547 BMPR1BO00238 502 aa9.35□□□□□ -0.91
IFT20-207ENST00000578547 TGOLN2O43493 480 aa9.35□□□□□ -0.91
IFT20-207ENST00000578547 CLN5O75503 358 aa9.35□□□□□ -0.91
IFT20-207ENST00000578547 SCGB2A1O75556 95 aa9.35□□□□□ -0.91
IFT20-207ENST00000578547 PF4P02776 101 aa9.35□□□□□ -0.91
IFT20-207ENST00000578547 HSPB1P04792 205 aaKnown RBP9.35□□□□□ -0.91
IFT20-207ENST00000578547 OR10J1P30954 320 aa9.35□□□□□ -0.91
IFT20-207ENST00000578547 S100A11P31949 105 aa9.35□□□□□ -0.91
IFT20-207ENST00000578547 ZNF616Q08AN1 781 aa9.35□□□□□ -0.91
IFT20-207ENST00000578547 RPEL1Q2QD12 228 aa9.35□□□□□ -0.91
IFT20-207ENST00000578547 FAM209BQ5JX69 171 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms