RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 TNFSF18Q9UNG2 199 aa6.27□□□□□ -1.41
COPS3-215ENST00000578317 TRBV9A0A0B4J1U6 114 aa6.26□□□□□ -1.41
COPS3-215ENST00000578317 PMS2P5A8MQ11 134 aa6.26□□□□□ -1.41
COPS3-215ENST00000578317 H3BUA1 57 aa6.26□□□□□ -1.41
COPS3-215ENST00000578317 CORTO00230 105 aa6.26□□□□□ -1.41
COPS3-215ENST00000578317 HKR1P10072 659 aa6.26□□□□□ -1.41
COPS3-215ENST00000578317 HIST1H1BP16401 226 aaKnown RBP6.26□□□□□ -1.41
COPS3-215ENST00000578317 NPY1RP25929 384 aa6.26□□□□□ -1.41
COPS3-215ENST00000578317 RPL12P30050 165 aaKnown RBP6.26□□□□□ -1.41
COPS3-215ENST00000578317 GPX4P36969 197 aaPredicted RBP6.26□□□□□ -1.41
COPS3-215ENST00000578317 CAV2P51636 162 aa6.26□□□□□ -1.41
COPS3-215ENST00000578317 LINC00310P59036 64 aa6.26□□□□□ -1.41
COPS3-215ENST00000578317 OR2F1Q13607 317 aa6.26□□□□□ -1.41
COPS3-215ENST00000578317 UNQ5815/PRO19632Q6UWF5 114 aa6.26□□□□□ -1.41
COPS3-215ENST00000578317 OR2T6Q8NHC8 308 aa6.26□□□□□ -1.41
COPS3-215ENST00000578317 ABHD5Q8WTS1 349 aa6.26□□□□□ -1.41
COPS3-215ENST00000578317 CACNG8Q8WXS5 425 aa6.26□□□□□ -1.41
COPS3-215ENST00000578317 DCUN1D4Q92564 292 aa6.26□□□□□ -1.41
COPS3-215ENST00000578317 GGACTQ9BVM4 153 aa6.26□□□□□ -1.41
COPS3-215ENST00000578317 IGLV11-55A0A075B6I3 123 aa6.25□□□□□ -1.41
COPS3-215ENST00000578317 FXYD6-FXYD2A0A087WZ82 144 aa6.25□□□□□ -1.41
COPS3-215ENST00000578317 RNF222A6NCQ9 220 aa6.25□□□□□ -1.41
COPS3-215ENST00000578317 FAM24AA6NFZ4 105 aa6.25□□□□□ -1.41
COPS3-215ENST00000578317 G3V318 75 aa6.25□□□□□ -1.41
COPS3-215ENST00000578317 IGHG4P01861 327 aa6.25□□□□□ -1.41
COPS3-215ENST00000578317 DEFA4P12838 97 aa6.25□□□□□ -1.41
COPS3-215ENST00000578317 S100A11P31949 105 aa6.25□□□□□ -1.41
COPS3-215ENST00000578317 NUP62P37198 522 aaPredicted RBP6.25□□□□□ -1.41
COPS3-215ENST00000578317 SULT1A1P50225 295 aa6.25□□□□□ -1.41
COPS3-215ENST00000578317 EXOSC2Q13868 293 aaKnown RBP6.25□□□□□ -1.41
COPS3-215ENST00000578317 ZNF345Q14585 488 aa6.25□□□□□ -1.41
COPS3-215ENST00000578317 ZNF124Q15973 351 aa6.25□□□□□ -1.41
COPS3-215ENST00000578317 ATP6V1FQ16864 119 aa6.25□□□□□ -1.41
COPS3-215ENST00000578317 OR5T1Q8NG75 326 aa6.25□□□□□ -1.41
COPS3-215ENST00000578317 OR10P1Q8NGE3 313 aa6.25□□□□□ -1.41
COPS3-215ENST00000578317 ST8SIA2Q92186 375 aa6.25□□□□□ -1.41
COPS3-215ENST00000578317 OR4C12Q96R67 309 aa6.25□□□□□ -1.41
COPS3-215ENST00000578317 THYN1Q9P016 225 aa6.25□□□□□ -1.41
COPS3-215ENST00000578317 DMRT1Q9Y5R6 373 aa6.25□□□□□ -1.41
COPS3-215ENST00000578317 A0A0D9SG52 128 aa6.25□□□□□ -1.41
COPS3-215ENST00000578317 A0A1B0GUS0 222 aa6.25□□□□□ -1.41
COPS3-215ENST00000578317 PRSS46E5RG02 174 aa6.25□□□□□ -1.41
COPS3-215ENST00000578317 FNDC10F2Z333 226 aa6.25□□□□□ -1.41
COPS3-215ENST00000578317 H3BP45 60 aa6.25□□□□□ -1.41
COPS3-215ENST00000578317 SOX15O60248 233 aa6.25□□□□□ -1.41
COPS3-215ENST00000578317 IFNA4P05014 189 aa6.25□□□□□ -1.41
COPS3-215ENST00000578317 METTL15P1P0C7V9 234 aa6.25□□□□□ -1.41
COPS3-215ENST00000578317 APELAP0DMC3 54 aa6.25□□□□□ -1.41
COPS3-215ENST00000578317 GCSHP23434 173 aa6.25□□□□□ -1.41
COPS3-215ENST00000578317 MFAP2P55001 183 aa6.25□□□□□ -1.41
COPS3-215ENST00000578317 HBG1P69891 147 aa6.25□□□□□ -1.41
COPS3-215ENST00000578317 HBG2P69892 147 aa6.25□□□□□ -1.41
COPS3-215ENST00000578317 SLC35B1P78383 322 aa6.25□□□□□ -1.41
COPS3-215ENST00000578317 EWSR1Q01844 656 aaKnown RBP eCLIP6.25□□□□□ -1.41
COPS3-215ENST00000578317 ECSCRQ19T08 205 aa6.25□□□□□ -1.41
COPS3-215ENST00000578317 SLC25A24Q6NUK1 477 aa6.25□□□□□ -1.41
COPS3-215ENST00000578317 STX12Q86Y82 276 aa6.25□□□□□ -1.41
COPS3-215ENST00000578317 KCNRGQ8N5I3 272 aa6.25□□□□□ -1.41
COPS3-215ENST00000578317 COMMD1Q8N668 190 aa6.25□□□□□ -1.41
COPS3-215ENST00000578317 OR4F5Q8NH21 305 aa6.25□□□□□ -1.41
COPS3-215ENST00000578317 LINC01006Q8NI28 216 aa6.25□□□□□ -1.41
COPS3-215ENST00000578317 WIPF2Q8TF74 440 aaPredicted RBP6.25□□□□□ -1.41
COPS3-215ENST00000578317 PINX1Q96BK5 328 aaKnown RBP6.25□□□□□ -1.41
COPS3-215ENST00000578317 NOL4LQ96MY1 436 aaPredicted RBP6.25□□□□□ -1.41
COPS3-215ENST00000578317 MFFQ9GZY8 342 aa6.25□□□□□ -1.41
COPS3-215ENST00000578317 SLA2Q9H6Q3 261 aa6.25□□□□□ -1.41
COPS3-215ENST00000578317 ATRQ13535 2644 aa6.24□□□□□ -1.41
COPS3-215ENST00000578317 IGSF23A1L1A6 192 aa6.24□□□□□ -1.41
COPS3-215ENST00000578317 NPIPB6E9PJ23 425 aa6.24□□□□□ -1.41
COPS3-215ENST00000578317 I3L2K1 104 aa6.24□□□□□ -1.41
COPS3-215ENST00000578317 TAAR5O14804 337 aa6.24□□□□□ -1.41
COPS3-215ENST00000578317 ARPC5O15511 151 aa6.24□□□□□ -1.41
COPS3-215ENST00000578317 PLXNB1O43157 2135 aa6.24□□□□□ -1.41
COPS3-215ENST00000578317 CST7O76096 145 aa6.24□□□□□ -1.41
COPS3-215ENST00000578317 REG1AP05451 166 aa6.24□□□□□ -1.41
COPS3-215ENST00000578317 ELANEP08246 267 aa6.24□□□□□ -1.41
COPS3-215ENST00000578317 OR8U8P0C7N1 319 aa6.24□□□□□ -1.41
COPS3-215ENST00000578317 PSMB8P28062 276 aa6.24□□□□□ -1.41
COPS3-215ENST00000578317 FCGR2BP31994 310 aaPredicted RBP6.24□□□□□ -1.41
COPS3-215ENST00000578317 NHLH2Q02577 135 aa6.24□□□□□ -1.41
COPS3-215ENST00000578317 ARL16Q0P5N6 197 aa6.24□□□□□ -1.41
COPS3-215ENST00000578317 FOXE3Q13461 319 aa6.24□□□□□ -1.41
COPS3-215ENST00000578317 LGALSLQ3ZCW2 172 aaPredicted RBP6.24□□□□□ -1.41
COPS3-215ENST00000578317 ETFRF1Q6IPR1 90 aa6.24□□□□□ -1.41
COPS3-215ENST00000578317 TEX38Q6PEX7 206 aa6.24□□□□□ -1.41
COPS3-215ENST00000578317 HAPLN4Q86UW8 402 aa6.24□□□□□ -1.41
COPS3-215ENST00000578317 NECAP1Q8NC96 275 aa6.24□□□□□ -1.41
COPS3-215ENST00000578317 USMG5Q96IX5 58 aa6.24□□□□□ -1.41
COPS3-215ENST00000578317 ATP6V0BQ99437 205 aa6.24□□□□□ -1.41
COPS3-215ENST00000578317 LINC00527Q9UJ94 153 aa6.24□□□□□ -1.41
COPS3-215ENST00000578317 HSPB11Q9Y547 144 aa6.24□□□□□ -1.41
COPS3-215ENST00000578317 C2CD3Q4AC94 2353 aa6.23□□□□□ -1.41
COPS3-215ENST00000578317 RPS10-NUDT3A0A1W2PQS6 291 aa6.23□□□□□ -1.41
COPS3-215ENST00000578317 CLPSL1A2RUU4 121 aa6.23□□□□□ -1.41
COPS3-215ENST00000578317 PSMB11A5LHX3 300 aa6.23□□□□□ -1.41
COPS3-215ENST00000578317 FAM223BA6NKX1 122 aa6.23□□□□□ -1.41
COPS3-215ENST00000578317 K7EIM0 57 aa6.23□□□□□ -1.41
COPS3-215ENST00000578317 HNRNPCP07910 306 aaKnown RBP eCLIP6.23□□□□□ -1.41
COPS3-215ENST00000578317 CXCL2P19875 107 aa6.23□□□□□ -1.41
COPS3-215ENST00000578317 RAB9AP51151 201 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 147.2 ms