RNA–Protein interactions for RNA: ENST00000578049.3

SEC22B-201, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22B, Length 6,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-201ENST00000578049 MEGF9Q9H1U4 602 aa8.95□□□□□ -0.98
SEC22B-201ENST00000578049 SEMA5BQ9P283 1151 aa8.95□□□□□ -0.98
SEC22B-201ENST00000578049 LEPP41159 167 aa8.95□□□□□ -0.98
SEC22B-201ENST00000578049 CGB1A6NKQ9 187 aa8.95□□□□□ -0.98
SEC22B-201ENST00000578049 M0R381 172 aa8.95□□□□□ -0.98
SEC22B-201ENST00000578049 NDUFS8O00217 210 aa8.95□□□□□ -0.98
SEC22B-201ENST00000578049 ZNF418Q8TF45 676 aaPredicted RBP8.95□□□□□ -0.98
SEC22B-201ENST00000578049 TMEM101Q96IK0 257 aa8.95□□□□□ -0.98
SEC22B-201ENST00000578049 GVINP1Q7Z2Y8 2422 aa8.94□□□□□ -0.98
SEC22B-201ENST00000578049 A8MWV9 139 aa8.94□□□□□ -0.98
SEC22B-201ENST00000578049 UMODP07911 640 aa8.94□□□□□ -0.98
SEC22B-201ENST00000578049 QRFPP83859 136 aa8.94□□□□□ -0.98
SEC22B-201ENST00000578049 RNF5Q99942 180 aa8.94□□□□□ -0.98
SEC22B-201ENST00000578049 PLNP26678 52 aa8.94□□□□□ -0.98
SEC22B-201ENST00000578049 KLRB1Q12918 225 aa8.94□□□□□ -0.98
SEC22B-201ENST00000578049 COQ2Q96H96 371 aa8.94□□□□□ -0.98
SEC22B-201ENST00000578049 RHOGP84095 191 aa8.94□□□□□ -0.98
SEC22B-201ENST00000578049 UBE2V1Q13404 147 aa8.94□□□□□ -0.98
SEC22B-201ENST00000578049 FAM74A4Q5TZK3 123 aa8.94□□□□□ -0.98
SEC22B-201ENST00000578049 FAM216BQ8N7L0 139 aa8.94□□□□□ -0.98
SEC22B-201ENST00000578049 C8orf46Q8TAG6 207 aa8.94□□□□□ -0.98
SEC22B-201ENST00000578049 BEX4Q9NWD9 120 aaPredicted RBP8.94□□□□□ -0.98
SEC22B-201ENST00000578049 C17orf100A8MU93 164 aa8.94□□□□□ -0.98
SEC22B-201ENST00000578049 APOMO95445 188 aa8.94□□□□□ -0.98
SEC22B-201ENST00000578049 IGKCP01834 107 aa8.94□□□□□ -0.98
SEC22B-201ENST00000578049 MST1P26927 711 aa8.94□□□□□ -0.98
SEC22B-201ENST00000578049 PIMREGQ9BSJ6 248 aa8.94□□□□□ -0.98
SEC22B-201ENST00000578049 FAM181BA6NEQ2 426 aa8.94□□□□□ -0.98
SEC22B-201ENST00000578049 NBR2O15453 112 aa8.94□□□□□ -0.98
SEC22B-201ENST00000578049 HOXA3O43365 443 aaPredicted RBP8.94□□□□□ -0.98
SEC22B-201ENST00000578049 PPP1R27Q86WC6 154 aa8.94□□□□□ -0.98
SEC22B-201ENST00000578049 WNK3Q9BYP7 1800 aa8.93□□□□□ -0.98
SEC22B-201ENST00000578049 OTOFQ9HC10 1997 aa8.93□□□□□ -0.98
SEC22B-201ENST00000578049 IGKV1-12A0A0C4DH73 117 aa8.93□□□□□ -0.98
SEC22B-201ENST00000578049 IGKV1D-12P01611 117 aa8.93□□□□□ -0.98
SEC22B-201ENST00000578049 LHX2P50458 406 aa8.93□□□□□ -0.98
SEC22B-201ENST00000578049 Q0VG73 95 aa8.93□□□□□ -0.98
SEC22B-201ENST00000578049 GAGE13Q4V321 117 aa8.93□□□□□ -0.98
SEC22B-201ENST00000578049 STPG1Q5TH74 334 aa8.93□□□□□ -0.98
SEC22B-201ENST00000578049 ZNF837Q96EG3 531 aaPredicted RBP8.93□□□□□ -0.98
SEC22B-201ENST00000578049 PATJQ8NI35 1801 aa8.93□□□□□ -0.98
SEC22B-201ENST00000578049 TRAV21A0A0B4J279 112 aa8.93□□□□□ -0.98
SEC22B-201ENST00000578049 NDUFS6O75380 124 aaKnown RBP8.93□□□□□ -0.98
SEC22B-201ENST00000578049 TFPI2P48307 235 aa8.93□□□□□ -0.98
SEC22B-201ENST00000578049 GCSAMLQ5JQS6 135 aa8.93□□□□□ -0.98
SEC22B-201ENST00000578049 GFI1BQ5VTD9 330 aa8.93□□□□□ -0.98
SEC22B-201ENST00000578049 RPRMLQ8N4K4 120 aa8.93□□□□□ -0.98
SEC22B-201ENST00000578049 IFI27P40305 119 aaPredicted RBP8.93□□□□□ -0.98
SEC22B-201ENST00000578049 ASCL4Q6XD76 172 aa8.93□□□□□ -0.98
SEC22B-201ENST00000578049 IGHV3-48P01763 117 aa8.93□□□□□ -0.98
SEC22B-201ENST00000578049 SAMD5Q5TGI4 173 aa8.93□□□□□ -0.98
SEC22B-201ENST00000578049 LYPD1Q8N2G4 141 aa8.93□□□□□ -0.98
SEC22B-201ENST00000578049 ST6GALNAC3Q8NDV1 305 aa8.93□□□□□ -0.98
SEC22B-201ENST00000578049 RPUSD1Q9UJJ7 312 aaKnown RBP8.93□□□□□ -0.98
SEC22B-201ENST00000578049 SRRM5B3KS81 715 aa8.93□□□□□ -0.98
SEC22B-201ENST00000578049 TRGV3P03979 118 aa8.93□□□□□ -0.98
SEC22B-201ENST00000578049 PDLIM4P50479 330 aa8.93□□□□□ -0.98
SEC22B-201ENST00000578049 ZIC4Q8N9L1 334 aa8.93□□□□□ -0.98
SEC22B-201ENST00000578049 NUDT11Q96G61 164 aa8.93□□□□□ -0.98
SEC22B-201ENST00000578049 TRAV8-2A0A0B4J237 113 aa8.92□□□□□ -0.98
SEC22B-201ENST00000578049 SNAI2O43623 268 aa8.92□□□□□ -0.98
SEC22B-201ENST00000578049 CD5LO43866 347 aa8.92□□□□□ -0.98
SEC22B-201ENST00000578049 NUDT10Q8NFP7 164 aa8.92□□□□□ -0.98
SEC22B-201ENST00000578049 NABP1Q96AH0 204 aa8.92□□□□□ -0.98
SEC22B-201ENST00000578049 SNRNP200O75643 2136 aaKnown RBP8.92□□□□□ -0.98
SEC22B-201ENST00000578049 IGHV1-2P23083 117 aa8.92□□□□□ -0.98
SEC22B-201ENST00000578049 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.92□□□□□ -0.98
SEC22B-201ENST00000578049 TMEM133Q9H2Q1 129 aa8.92□□□□□ -0.98
SEC22B-201ENST00000578049 TNS1Q9HBL0 1735 aaKnown RBP8.92□□□□□ -0.98
SEC22B-201ENST00000578049 CD55P08174 381 aa8.92□□□□□ -0.98
SEC22B-201ENST00000578049 GZMBP10144 247 aa8.92□□□□□ -0.98
SEC22B-201ENST00000578049 VSIRQ9H7M9 311 aa8.92□□□□□ -0.98
SEC22B-201ENST00000578049 FAM231BA6NCW3 169 aa8.92□□□□□ -0.98
SEC22B-201ENST00000578049 RBMY1BA6NDE4 496 aaKnown RBP8.92□□□□□ -0.98
SEC22B-201ENST00000578049 RBMY1EA6NEQ0 496 aaKnown RBP8.92□□□□□ -0.98
SEC22B-201ENST00000578049 RAMP3O60896 148 aa8.92□□□□□ -0.98
SEC22B-201ENST00000578049 OR9G9P0C7N8 305 aa8.92□□□□□ -0.98
SEC22B-201ENST00000578049 RBMY1DP0C7P1 496 aaKnown RBP8.92□□□□□ -0.98
SEC22B-201ENST00000578049 RBMY1A1P0DJD3 496 aaKnown RBP8.92□□□□□ -0.98
SEC22B-201ENST00000578049 RBMY1CP0DJD4 496 aa8.92□□□□□ -0.98
SEC22B-201ENST00000578049 MYOD1P15172 320 aa8.92□□□□□ -0.98
SEC22B-201ENST00000578049 GATA2P23769 480 aaPredicted RBP8.92□□□□□ -0.98
SEC22B-201ENST00000578049 FAM90A2PQ658T7 463 aa8.92□□□□□ -0.98
SEC22B-201ENST00000578049 DOCK4Q8N1I0 1966 aa8.92□□□□□ -0.98
SEC22B-201ENST00000578049 A0A087WV48 116 aa8.91□□□□□ -0.98
SEC22B-201ENST00000578049 TRGV9Q99603 122 aa8.91□□□□□ -0.98
SEC22B-201ENST00000578049 FNDC4Q9H6D8 234 aaPredicted RBP8.91□□□□□ -0.98
SEC22B-201ENST00000578049 ADCYAP1P18509 176 aa8.91□□□□□ -0.98
SEC22B-201ENST00000578049 VWCEQ96DN2 955 aa8.91□□□□□ -0.98
SEC22B-201ENST00000578049 SIGLEC12Q96PQ1 595 aa8.91□□□□□ -0.98
SEC22B-201ENST00000578049 POLR2AP24928 1970 aaKnown RBP8.91□□□□□ -0.98
SEC22B-201ENST00000578049 DUSP14O95147 198 aaKnown RBP8.91□□□□□ -0.98
SEC22B-201ENST00000578049 IGKV1-5P01602 117 aa8.91□□□□□ -0.98
SEC22B-201ENST00000578049 C10orf91Q5T1B1 145 aa8.91□□□□□ -0.98
SEC22B-201ENST00000578049 RNF182Q8N6D2 247 aa8.91□□□□□ -0.98
SEC22B-201ENST00000578049 AKIRIN1Q9H9L7 192 aaPredicted RBP8.91□□□□□ -0.98
SEC22B-201ENST00000578049 E9PQ18 207 aa8.91□□□□□ -0.98
SEC22B-201ENST00000578049 FOXF2Q12947 444 aa8.91□□□□□ -0.98
SEC22B-201ENST00000578049 FOXL2NBQ6ZUU3 175 aa8.91□□□□□ -0.98
SEC22B-201ENST00000578049 DCTN5Q9BTE1 182 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms