RNA–Protein interactions for RNA: ENST00000577725.1

CRLF3-202, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-202ENST00000577725 OR2T6Q8NHC8 308 aa7.89□□□□□ -1.15
CRLF3-202ENST00000577725 TMED6Q8WW62 240 aa7.89□□□□□ -1.15
CRLF3-202ENST00000577725 TAF15Q92804 592 aaKnown RBP eCLIP7.89□□□□□ -1.15
CRLF3-202ENST00000577725 PINX1Q96BK5 328 aaKnown RBP7.89□□□□□ -1.15
CRLF3-202ENST00000577725 GINS3Q9BRX5 216 aa7.89□□□□□ -1.15
CRLF3-202ENST00000577725 RSG1Q9BU20 258 aa7.89□□□□□ -1.15
CRLF3-202ENST00000577725 ARV1Q9H2C2 271 aa7.89□□□□□ -1.15
CRLF3-202ENST00000577725 FNDC4Q9H6D8 234 aaPredicted RBP7.89□□□□□ -1.15
CRLF3-202ENST00000577725 UQCC1Q9NVA1 299 aa7.89□□□□□ -1.15
CRLF3-202ENST00000577725 MRPL36Q9P0J6 103 aaKnown RBP7.89□□□□□ -1.15
CRLF3-202ENST00000577725 VPREB3Q9UKI3 123 aa7.89□□□□□ -1.15
CRLF3-202ENST00000577725 F11RQ9Y624 299 aaKnown RBP7.89□□□□□ -1.15
CRLF3-202ENST00000577725 DNAJC9-AS1A6NH13 148 aa7.88□□□□□ -1.15
CRLF3-202ENST00000577725 RGS13O14921 159 aa7.88□□□□□ -1.15
CRLF3-202ENST00000577725 JTBO76095 146 aa7.88□□□□□ -1.15
CRLF3-202ENST00000577725 DEFA4P12838 97 aa7.88□□□□□ -1.15
CRLF3-202ENST00000577725 ATP6V0CP27449 155 aa7.88□□□□□ -1.15
CRLF3-202ENST00000577725 SUB1P53999 127 aaKnown RBP eCLIP7.88□□□□□ -1.15
CRLF3-202ENST00000577725 ATP6V1FQ16864 119 aa7.88□□□□□ -1.15
CRLF3-202ENST00000577725 SAMD5Q5TGI4 173 aa7.88□□□□□ -1.15
CRLF3-202ENST00000577725 C16orf82Q7Z2V1 217 aa7.88□□□□□ -1.15
CRLF3-202ENST00000577725 SLC35E3Q7Z769 313 aa7.88□□□□□ -1.15
CRLF3-202ENST00000577725 UBAC2Q8NBM4 344 aa7.88□□□□□ -1.15
CRLF3-202ENST00000577725 ZNF114Q8NC26 417 aa7.88□□□□□ -1.15
CRLF3-202ENST00000577725 OR1P1Q8NH06 330 aa7.88□□□□□ -1.15
CRLF3-202ENST00000577725 SCGB1C1Q8TD33 95 aa7.88□□□□□ -1.15
CRLF3-202ENST00000577725 NOL4LQ96MY1 436 aaPredicted RBP7.88□□□□□ -1.15
CRLF3-202ENST00000577725 SRSF8Q9BRL6 282 aaKnown RBP7.88□□□□□ -1.15
CRLF3-202ENST00000577725 SLC25A32Q9H2D1 315 aa7.88□□□□□ -1.15
CRLF3-202ENST00000577725 PRDM13Q9H4Q3 707 aa7.88□□□□□ -1.15
CRLF3-202ENST00000577725 UBQLN2Q9UHD9 624 aa7.88□□□□□ -1.15
CRLF3-202ENST00000577725 S4R3C0 116 aa7.88□□□□□ -1.15
CRLF3-202ENST00000577725 NPIPB5A8MRT5 1133 aa7.87□□□□□ -1.15
CRLF3-202ENST00000577725 MT-CO2P00403 227 aa7.87□□□□□ -1.15
CRLF3-202ENST00000577725 IFNA7P01567 189 aa7.87□□□□□ -1.15
CRLF3-202ENST00000577725 OPRK1P41145 380 aa7.87□□□□□ -1.15
CRLF3-202ENST00000577725 AKR1C1Q04828 323 aa7.87□□□□□ -1.15
CRLF3-202ENST00000577725 CD69Q07108 199 aa7.87□□□□□ -1.15
CRLF3-202ENST00000577725 ZNF266Q14584 549 aa7.87□□□□□ -1.15
CRLF3-202ENST00000577725 VWC2Q2TAL6 325 aa7.87□□□□□ -1.15
CRLF3-202ENST00000577725 BEAN1Q3B7T3 259 aa7.87□□□□□ -1.15
CRLF3-202ENST00000577725 BTNL8Q6UX41 500 aa7.87□□□□□ -1.15
CRLF3-202ENST00000577725 TMEM182Q6ZP80 229 aaPredicted RBP7.87□□□□□ -1.15
CRLF3-202ENST00000577725 ZNF767PQ75MW2 155 aa7.87□□□□□ -1.15
CRLF3-202ENST00000577725 TTC9CQ8N5M4 171 aa7.87□□□□□ -1.15
CRLF3-202ENST00000577725 MRAPQ8TCY5 172 aa7.87□□□□□ -1.15
CRLF3-202ENST00000577725 SCARB1Q8WTV0 552 aa7.87□□□□□ -1.15
CRLF3-202ENST00000577725 ACY3Q96HD9 319 aa7.87□□□□□ -1.15
CRLF3-202ENST00000577725 SLC35E1Q96K37 410 aa7.87□□□□□ -1.15
CRLF3-202ENST00000577725 WWC2-AS2Q96NR7 200 aa7.87□□□□□ -1.15
CRLF3-202ENST00000577725 CLUHP3Q96NS8 147 aa7.87□□□□□ -1.15
CRLF3-202ENST00000577725 WDR61Q9GZS3 305 aaKnown RBP7.87□□□□□ -1.15
CRLF3-202ENST00000577725 ZNF355PQ9NSJ1 428 aa7.87□□□□□ -1.15
CRLF3-202ENST00000577725 TRAV41A0A0B4J266 112 aa7.86□□□□□ -1.15
CRLF3-202ENST00000577725 M0QZK8 103 aa7.86□□□□□ -1.15
CRLF3-202ENST00000577725 OR2J3O76001 311 aa7.86□□□□□ -1.15
CRLF3-202ENST00000577725 NDUFB8O95169 186 aa7.86□□□□□ -1.15
CRLF3-202ENST00000577725 IGHV3-23P01764 117 aa7.86□□□□□ -1.15
CRLF3-202ENST00000577725 IGHG2P01859 326 aa7.86□□□□□ -1.15
CRLF3-202ENST00000577725 PRB2P02812 416 aaPredicted RBP7.86□□□□□ -1.15
CRLF3-202ENST00000577725 CRYGCP07315 174 aa7.86□□□□□ -1.15
CRLF3-202ENST00000577725 RND2P52198 227 aa7.86□□□□□ -1.15
CRLF3-202ENST00000577725 ELLP55199 621 aaPredicted RBP7.86□□□□□ -1.15
CRLF3-202ENST00000577725 ATP5IP56385 69 aaPredicted RBP7.86□□□□□ -1.15
CRLF3-202ENST00000577725 EIF5AP63241 154 aaKnown RBP7.86□□□□□ -1.15
CRLF3-202ENST00000577725 GAMTQ14353 236 aa7.86□□□□□ -1.15
CRLF3-202ENST00000577725 PVRIGQ6DKI7 326 aa7.86□□□□□ -1.15
CRLF3-202ENST00000577725 RBMS3Q6XE24 437 aaKnown RBP7.86□□□□□ -1.15
CRLF3-202ENST00000577725 HSD17B13Q7Z5P4 300 aaPredicted RBP7.86□□□□□ -1.15
CRLF3-202ENST00000577725 OR2G3Q8NGZ4 309 aa7.86□□□□□ -1.15
CRLF3-202ENST00000577725 FAM110DQ8TAY7 271 aaPredicted RBP7.86□□□□□ -1.15
CRLF3-202ENST00000577725 RNASEH2CQ8TDP1 164 aaKnown RBP7.86□□□□□ -1.15
CRLF3-202ENST00000577725 NPIPB3Q92617 1050 aa7.86□□□□□ -1.15
CRLF3-202ENST00000577725 MS4A10Q96PG2 267 aa7.86□□□□□ -1.15
CRLF3-202ENST00000577725 FANCD2OSQ96PS1 177 aa7.86□□□□□ -1.15
CRLF3-202ENST00000577725 MGST2Q99735 147 aa7.86□□□□□ -1.15
CRLF3-202ENST00000577725 ZNF702PQ9H963 129 aa7.86□□□□□ -1.15
CRLF3-202ENST00000577725 WDR83OSQ9Y284 106 aa7.86□□□□□ -1.15
CRLF3-202ENST00000577725 IGLV11-55A0A075B6I3 123 aa7.85□□□□□ -1.15
CRLF3-202ENST00000577725 I3L2K1 104 aa7.85□□□□□ -1.15
CRLF3-202ENST00000577725 K7EIM0 57 aa7.85□□□□□ -1.15
CRLF3-202ENST00000577725 SOX15O60248 233 aa7.85□□□□□ -1.15
CRLF3-202ENST00000577725 EIF3GO75821 320 aaKnown RBP eCLIP7.85□□□□□ -1.15
CRLF3-202ENST00000577725 SCAF4O95104 1147 aaKnown RBP7.85□□□□□ -1.15
CRLF3-202ENST00000577725 SPP1P10451 314 aa7.85□□□□□ -1.15
CRLF3-202ENST00000577725 MDKP21741 143 aaPredicted RBP7.85□□□□□ -1.15
CRLF3-202ENST00000577725 GPX4P36969 197 aaPredicted RBP7.85□□□□□ -1.15
CRLF3-202ENST00000577725 C19orf54Q5BKX5 351 aa7.85□□□□□ -1.15
CRLF3-202ENST00000577725 GGACTQ9BVM4 153 aa7.85□□□□□ -1.15
CRLF3-202ENST00000577725 PARD6GQ9BYG4 376 aaPredicted RBP7.85□□□□□ -1.15
CRLF3-202ENST00000577725 VSIRQ9H7M9 311 aa7.85□□□□□ -1.15
CRLF3-202ENST00000577725 ZFAND3Q9H8U3 227 aa7.85□□□□□ -1.15
CRLF3-202ENST00000577725 IGKV1OR2-108A0A075B7D4 117 aa7.84□□□□□ -1.15
CRLF3-202ENST00000577725 RPS10-NUDT3A0A1W2PQS6 291 aa7.84□□□□□ -1.15
CRLF3-202ENST00000577725 MFSD2BA6NFX1 497 aa7.84□□□□□ -1.15
CRLF3-202ENST00000577725 TEX46H3BTG2 121 aa7.84□□□□□ -1.15
CRLF3-202ENST00000577725 GATA2P23769 480 aaPredicted RBP7.84□□□□□ -1.15
CRLF3-202ENST00000577725 OR10J1P30954 320 aa7.84□□□□□ -1.15
CRLF3-202ENST00000577725 CRIP2P52943 208 aaPredicted RBP7.84□□□□□ -1.15
CRLF3-202ENST00000577725 KPRPQ5T749 579 aaPredicted RBP7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms