RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 SAA1P0DJI8 122 aaPredicted RBP4.35□□□□□ -1.71
VAPA-203ENST00000577539 DDTP30046 118 aa4.35□□□□□ -1.71
VAPA-203ENST00000577539 TIMP3P35625 211 aa4.35□□□□□ -1.71
VAPA-203ENST00000577539 PKIAP61925 76 aa4.35□□□□□ -1.71
VAPA-203ENST00000577539 FAM110DQ8TAY7 271 aaPredicted RBP4.35□□□□□ -1.71
VAPA-203ENST00000577539 RAB1CQ92928 201 aa4.35□□□□□ -1.71
VAPA-203ENST00000577539 SLC35E1Q96K37 410 aa4.35□□□□□ -1.71
VAPA-203ENST00000577539 DIRC2Q96SL1 478 aa4.35□□□□□ -1.71
VAPA-203ENST00000577539 SAP30LQ9HAJ7 183 aa4.35□□□□□ -1.71
VAPA-203ENST00000577539 CEP295Q9C0D2 2601 aa4.35□□□□□ -1.71
VAPA-203ENST00000577539 IGLV3-9A0A075B6K5 115 aa4.35□□□□□ -1.71
VAPA-203ENST00000577539 MKRN2OSH3BPM6 223 aa4.35□□□□□ -1.71
VAPA-203ENST00000577539 UPK2O00526 184 aa4.35□□□□□ -1.71
VAPA-203ENST00000577539 NDUFS6O75380 124 aaKnown RBP4.35□□□□□ -1.71
VAPA-203ENST00000577539 LHBP01229 141 aa4.35□□□□□ -1.71
VAPA-203ENST00000577539 CT45A6P0DMU7 189 aa4.35□□□□□ -1.71
VAPA-203ENST00000577539 CT45A5P0DMU8 189 aa4.35□□□□□ -1.71
VAPA-203ENST00000577539 CT45A7P0DMV0 189 aa4.35□□□□□ -1.71
VAPA-203ENST00000577539 ZFP36P26651 326 aaKnown RBP4.35□□□□□ -1.71
VAPA-203ENST00000577539 IER3P46695 156 aa4.35□□□□□ -1.71
VAPA-203ENST00000577539 GNG4P50150 75 aa4.35□□□□□ -1.71
VAPA-203ENST00000577539 ERHP84090 104 aaKnown RBP4.35□□□□□ -1.71
VAPA-203ENST00000577539 FXYD3Q14802 87 aa4.35□□□□□ -1.71
VAPA-203ENST00000577539 TIGITQ495A1 244 aa4.35□□□□□ -1.71
VAPA-203ENST00000577539 C10orf55Q5SWW7 151 aa4.35□□□□□ -1.71
VAPA-203ENST00000577539 ETFRF1Q6IPR1 90 aa4.35□□□□□ -1.71
VAPA-203ENST00000577539 TEX38Q6PEX7 206 aa4.35□□□□□ -1.71
VAPA-203ENST00000577539 GFRALQ6UXV0 394 aa4.35□□□□□ -1.71
VAPA-203ENST00000577539 ZNF788Q6ZQV5 615 aa4.35□□□□□ -1.71
VAPA-203ENST00000577539 Q6ZS92 163 aa4.35□□□□□ -1.71
VAPA-203ENST00000577539 BAGE3Q86Y29 109 aa4.35□□□□□ -1.71
VAPA-203ENST00000577539 BAGE2Q86Y30 109 aa4.35□□□□□ -1.71
VAPA-203ENST00000577539 DOLPP1Q86YN1 238 aa4.35□□□□□ -1.71
VAPA-203ENST00000577539 TMEM256Q8N2U0 113 aa4.35□□□□□ -1.71
VAPA-203ENST00000577539 DDB2Q92466 427 aa4.35□□□□□ -1.71
VAPA-203ENST00000577539 NPIPB3Q92617 1050 aa4.35□□□□□ -1.71
VAPA-203ENST00000577539 SFXN3Q9BWM7 321 aa4.35□□□□□ -1.71
VAPA-203ENST00000577539 GAL3ST2Q9H3Q3 398 aa4.35□□□□□ -1.71
VAPA-203ENST00000577539 RPUSD1Q9UJJ7 312 aaKnown RBP4.35□□□□□ -1.71
VAPA-203ENST00000577539 FOXA2Q9Y261 457 aaPredicted RBP4.35□□□□□ -1.71
VAPA-203ENST00000577539 ANKRD11Q6UB99 2663 aaPredicted RBP4.34□□□□□ -1.71
VAPA-203ENST00000577539 COL6A6A6NMZ7 2263 aa4.34□□□□□ -1.71
VAPA-203ENST00000577539 TRGV8A0A0C4DH27 118 aa4.34□□□□□ -1.71
VAPA-203ENST00000577539 HELTA6NFD8 242 aa4.34□□□□□ -1.71
VAPA-203ENST00000577539 FCN1O00602 326 aa4.34□□□□□ -1.71
VAPA-203ENST00000577539 PLAUP00749 431 aa4.34□□□□□ -1.71
VAPA-203ENST00000577539 OR5G3P0C626 314 aa4.34□□□□□ -1.71
VAPA-203ENST00000577539 JOSD1Q15040 202 aaPredicted RBP4.34□□□□□ -1.71
VAPA-203ENST00000577539 HLA-DRB5Q30154 266 aa4.34□□□□□ -1.71
VAPA-203ENST00000577539 ACTL10Q5JWF8 245 aa4.34□□□□□ -1.71
VAPA-203ENST00000577539 PQLC2Q6ZP29 291 aa4.34□□□□□ -1.71
VAPA-203ENST00000577539 OR8I2Q8N0Y5 310 aa4.34□□□□□ -1.71
VAPA-203ENST00000577539 RBMXL3Q8N7X1 1067 aaKnown RBP4.34□□□□□ -1.71
VAPA-203ENST00000577539 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.34□□□□□ -1.71
VAPA-203ENST00000577539 BTF3L4Q96K17 158 aa4.34□□□□□ -1.71
VAPA-203ENST00000577539 ZNF714Q96N38 554 aa4.34□□□□□ -1.71
VAPA-203ENST00000577539 TMEM14BQ9NUH8 114 aa4.34□□□□□ -1.71
VAPA-203ENST00000577539 TECRQ9NZ01 308 aaKnown RBP4.34□□□□□ -1.71
VAPA-203ENST00000577539 RPH3ALQ9UNE2 315 aa4.34□□□□□ -1.71
VAPA-203ENST00000577539 SPTBN1Q01082 2364 aaKnown RBP4.34□□□□□ -1.71
VAPA-203ENST00000577539 AKAP6Q13023 2319 aa4.34□□□□□ -1.71
VAPA-203ENST00000577539 PPIAL4EA0A075B759 164 aa4.34□□□□□ -1.71
VAPA-203ENST00000577539 IGHV3-21A0A0B4J1V1 117 aa4.34□□□□□ -1.71
VAPA-203ENST00000577539 TEX50A0A1B0GTY4 177 aa4.34□□□□□ -1.71
VAPA-203ENST00000577539 PPIAL4DF5H284 164 aa4.34□□□□□ -1.71
VAPA-203ENST00000577539 NDUFB3O43676 98 aa4.34□□□□□ -1.71
VAPA-203ENST00000577539 REG1AP05451 166 aa4.34□□□□□ -1.71
VAPA-203ENST00000577539 PPIAL4FP0DN26 164 aa4.34□□□□□ -1.71
VAPA-203ENST00000577539 CGB3P0DN86 165 aa4.34□□□□□ -1.71
VAPA-203ENST00000577539 CGB7P0DN87 165 aa4.34□□□□□ -1.71
VAPA-203ENST00000577539 GZMBP10144 247 aa4.34□□□□□ -1.71
VAPA-203ENST00000577539 GPX4P36969 197 aaPredicted RBP4.34□□□□□ -1.71
VAPA-203ENST00000577539 RPL29P47914 159 aaKnown RBP4.34□□□□□ -1.71
VAPA-203ENST00000577539 PCP4P48539 62 aa4.34□□□□□ -1.71
VAPA-203ENST00000577539 TAS2R45P59539 299 aa4.34□□□□□ -1.71
VAPA-203ENST00000577539 LCN2P80188 198 aa4.34□□□□□ -1.71
VAPA-203ENST00000577539 BSPH1Q075Z2 132 aa4.34□□□□□ -1.71
VAPA-203ENST00000577539 CENPWQ5EE01 88 aa4.34□□□□□ -1.71
VAPA-203ENST00000577539 OR2T6Q8NHC8 308 aa4.34□□□□□ -1.71
VAPA-203ENST00000577539 FLYWCH2Q96CP2 140 aaKnown RBP4.34□□□□□ -1.71
VAPA-203ENST00000577539 MS4A10Q96PG2 267 aa4.34□□□□□ -1.71
VAPA-203ENST00000577539 TXNDC17Q9BRA2 123 aa4.34□□□□□ -1.71
VAPA-203ENST00000577539 SAMD10Q9BYL1 202 aa4.34□□□□□ -1.71
VAPA-203ENST00000577539 LSM4Q9Y4Z0 139 aaKnown RBP4.34□□□□□ -1.71
VAPA-203ENST00000577539 PPIAL4AQ9Y536 164 aa4.34□□□□□ -1.71
VAPA-203ENST00000577539 NAV3Q8IVL0 2385 aa4.34□□□□□ -1.71
VAPA-203ENST00000577539 SPTAN1Q13813 2472 aaKnown RBP4.34□□□□□ -1.72
VAPA-203ENST00000577539 TRAV5A0A0B4J249 113 aa4.34□□□□□ -1.72
VAPA-203ENST00000577539 DPRXA6NFQ7 191 aa4.34□□□□□ -1.72
VAPA-203ENST00000577539 SNURFLB1AK76 121 aa4.34□□□□□ -1.72
VAPA-203ENST00000577539 B5MCH6 92 aa4.34□□□□□ -1.72
VAPA-203ENST00000577539 GATCO43716 136 aaKnown RBP4.34□□□□□ -1.72
VAPA-203ENST00000577539 BMI1P35226 326 aa4.34□□□□□ -1.72
VAPA-203ENST00000577539 RPL8P62917 257 aaKnown RBP4.34□□□□□ -1.72
VAPA-203ENST00000577539 UBE2L3P68036 154 aaKnown RBP4.34□□□□□ -1.72
VAPA-203ENST00000577539 PRCDQ00LT1 54 aa4.34□□□□□ -1.72
VAPA-203ENST00000577539 PAX5Q02548 391 aa4.34□□□□□ -1.72
VAPA-203ENST00000577539 TMEM144Q7Z5S9 345 aa4.34□□□□□ -1.72
VAPA-203ENST00000577539 OR1L6Q8NGR2 347 aa4.34□□□□□ -1.72
VAPA-203ENST00000577539 OR1L8Q8NGR8 309 aa4.34□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 140.2 ms