RNA–Protein interactions for RNA: ENST00000577390.5

CDH8-203, Transcript of cadherin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH8, Length 9,721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-203ENST00000577390 SF3B5Q9BWJ5 86 aaKnown RBP7.57□□□□□ -1.2
CDH8-203ENST00000577390 OR2H1Q9GZK4 316 aa7.57□□□□□ -1.2
CDH8-203ENST00000577390 GCM2O75603 506 aaPredicted RBP7.57□□□□□ -1.2
CDH8-203ENST00000577390 SRP19P09132 144 aaKnown RBP7.57□□□□□ -1.2
CDH8-203ENST00000577390 FAM57AQ8TBR7 257 aa7.57□□□□□ -1.2
CDH8-203ENST00000577390 IGHV3OR16-8A0A075B7F1 116 aa7.57□□□□□ -1.2
CDH8-203ENST00000577390 TRAV2A0A0B4J234 112 aa7.57□□□□□ -1.2
CDH8-203ENST00000577390 A0A0G2JK05 382 aa7.57□□□□□ -1.2
CDH8-203ENST00000577390 EPPINO95925 133 aa7.57□□□□□ -1.2
CDH8-203ENST00000577390 ATP6V0CP27449 155 aa7.57□□□□□ -1.2
CDH8-203ENST00000577390 C6orf226Q5I0X4 101 aa7.57□□□□□ -1.2
CDH8-203ENST00000577390 NRN1Q9NPD7 142 aa7.57□□□□□ -1.2
CDH8-203ENST00000577390 A0A0U1RQV5 110 aa7.56□□□□□ -1.2
CDH8-203ENST00000577390 PLNP26678 52 aa7.56□□□□□ -1.2
CDH8-203ENST00000577390 TRAV24A0A0B4J272 114 aa7.56□□□□□ -1.2
CDH8-203ENST00000577390 SLC25A1P53007 311 aa7.56□□□□□ -1.2
CDH8-203ENST00000577390 GAGE2EQ4V326 116 aa7.56□□□□□ -1.2
CDH8-203ENST00000577390 ATOH7Q8N100 152 aa7.56□□□□□ -1.2
CDH8-203ENST00000577390 FAM110DQ8TAY7 271 aaPredicted RBP7.56□□□□□ -1.2
CDH8-203ENST00000577390 GAGE2DQ9UEU5 116 aa7.56□□□□□ -1.2
CDH8-203ENST00000577390 KLK13Q9UKR3 277 aa7.56□□□□□ -1.2
CDH8-203ENST00000577390 MUC21A0A0G2JKD1 596 aa7.56□□□□□ -1.2
CDH8-203ENST00000577390 MUC21A0A140T8X8 626 aa7.56□□□□□ -1.2
CDH8-203ENST00000577390 RPL36A-HNRNPH2H7BZ11 118 aa7.56□□□□□ -1.2
CDH8-203ENST00000577390 MMP23AO75900 390 aa7.56□□□□□ -1.2
CDH8-203ENST00000577390 CD28P10747 220 aa7.56□□□□□ -1.2
CDH8-203ENST00000577390 EGR2P11161 476 aaPredicted RBP7.56□□□□□ -1.2
CDH8-203ENST00000577390 MUC21Q5SSG8 566 aa7.56□□□□□ -1.2
CDH8-203ENST00000577390 SCD5Q86SK9 330 aa7.56□□□□□ -1.2
CDH8-203ENST00000577390 AZU1P20160 251 aa7.56□□□□□ -1.2
CDH8-203ENST00000577390 IL11P20809 199 aa7.56□□□□□ -1.2
CDH8-203ENST00000577390 GPR183P32249 361 aa7.56□□□□□ -1.2
CDH8-203ENST00000577390 C9orf50Q5SZB4 431 aa7.56□□□□□ -1.2
CDH8-203ENST00000577390 MRPL18Q9H0U6 180 aaKnown RBP7.56□□□□□ -1.2
CDH8-203ENST00000577390 TRAV8-4A0A0B4J246 113 aa7.56□□□□□ -1.2
CDH8-203ENST00000577390 IGHV2OR16-5A0A0B4J2B6 119 aa7.56□□□□□ -1.2
CDH8-203ENST00000577390 TRAV9-1A0A075B6T8 112 aa7.56□□□□□ -1.2
CDH8-203ENST00000577390 F5H768 121 aa7.56□□□□□ -1.2
CDH8-203ENST00000577390 RAMP3O60896 148 aa7.56□□□□□ -1.2
CDH8-203ENST00000577390 PDCD6O75340 191 aa7.56□□□□□ -1.2
CDH8-203ENST00000577390 SERF1AO75920 110 aa7.56□□□□□ -1.2
CDH8-203ENST00000577390 IDI2-AS1Q9NZ38 188 aa7.56□□□□□ -1.2
CDH8-203ENST00000577390 SHISA3A0PJX4 238 aa7.56□□□□□ -1.2
CDH8-203ENST00000577390 IGHV3-53P01767 116 aa7.56□□□□□ -1.2
CDH8-203ENST00000577390 ICAM4Q14773 271 aa7.56□□□□□ -1.2
CDH8-203ENST00000577390 CYP2G1PQ6ZSU1 146 aa7.56□□□□□ -1.2
CDH8-203ENST00000577390 TIMM17AQ99595 171 aa7.56□□□□□ -1.2
CDH8-203ENST00000577390 ST6GALNAC2Q9UJ37 374 aa7.56□□□□□ -1.2
CDH8-203ENST00000577390 FGF14Q92915 247 aa7.55□□□□□ -1.2
CDH8-203ENST00000577390 KCNE3Q9Y6H6 103 aa7.55□□□□□ -1.2
CDH8-203ENST00000577390 NPIPB11E5RHQ5 1161 aa7.55□□□□□ -1.2
CDH8-203ENST00000577390 LILRA3Q8N6C8 439 aaPredicted RBP7.55□□□□□ -1.2
CDH8-203ENST00000577390 TPRX1Q8N7U7 411 aa7.55□□□□□ -1.2
CDH8-203ENST00000577390 C8orf31Q8N9H6 132 aa7.55□□□□□ -1.2
CDH8-203ENST00000577390 KCNE1BA0A087WTH5 132 aa7.55□□□□□ -1.2
CDH8-203ENST00000577390 TAF15Q92804 592 aaKnown RBP eCLIP7.55□□□□□ -1.2
CDH8-203ENST00000577390 CLUHP3Q96NS8 147 aa7.55□□□□□ -1.2
CDH8-203ENST00000577390 C1orf43Q9BWL3 253 aa7.55□□□□□ -1.2
CDH8-203ENST00000577390 B9D1Q9UPM9 204 aa7.55□□□□□ -1.2
CDH8-203ENST00000577390 SELENOKQ9Y6D0 94 aa7.55□□□□□ -1.2
CDH8-203ENST00000577390 IL9P15248 144 aa7.55□□□□□ -1.2
CDH8-203ENST00000577390 TMEM155Q4W5P6 130 aa7.55□□□□□ -1.2
CDH8-203ENST00000577390 DNM1P46Q6ZS02 220 aa7.55□□□□□ -1.2
CDH8-203ENST00000577390 SMIM14Q96QK8 99 aa7.55□□□□□ -1.2
CDH8-203ENST00000577390 DUSP15Q9H1R2 295 aaPredicted RBP7.55□□□□□ -1.2
CDH8-203ENST00000577390 NLRC5Q86WI3 1866 aa7.55□□□□□ -1.2
CDH8-203ENST00000577390 ATG2AQ2TAZ0 1938 aa7.55□□□□□ -1.2
CDH8-203ENST00000577390 NKX2-6A6NCS4 301 aa7.55□□□□□ -1.2
CDH8-203ENST00000577390 TEX43Q6ZNM6 134 aa7.55□□□□□ -1.2
CDH8-203ENST00000577390 TXNDC17Q9BRA2 123 aa7.55□□□□□ -1.2
CDH8-203ENST00000577390 SIGLEC7Q9Y286 467 aa7.55□□□□□ -1.2
CDH8-203ENST00000577390 C16orf47Q6ZP98 133 aaPredicted RBP7.55□□□□□ -1.2
CDH8-203ENST00000577390 ZNF414Q96IQ9 312 aa7.55□□□□□ -1.2
CDH8-203ENST00000577390 M0R2P5 195 aa7.55□□□□□ -1.2
CDH8-203ENST00000577390 UCP1P25874 307 aa7.55□□□□□ -1.2
CDH8-203ENST00000577390 INO80CQ6PI98 192 aaPredicted RBP7.55□□□□□ -1.2
CDH8-203ENST00000577390 C5orf66Q9H5L9 145 aa7.55□□□□□ -1.2
CDH8-203ENST00000577390 TRGV1A0A0A0MS02 117 aa7.54□□□□□ -1.2
CDH8-203ENST00000577390 METTL12A8MUP2 240 aa7.54□□□□□ -1.2
CDH8-203ENST00000577390 NT5CQ8TCD5 201 aa7.54□□□□□ -1.2
CDH8-203ENST00000577390 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.54□□□□□ -1.2
CDH8-203ENST00000577390 DEFB130BP0DP73 79 aa7.54□□□□□ -1.2
CDH8-203ENST00000577390 DEFB130AP0DP74 79 aa7.54□□□□□ -1.2
CDH8-203ENST00000577390 ZNF708P17019 499 aa7.54□□□□□ -1.2
CDH8-203ENST00000577390 EWSR1Q01844 656 aaKnown RBP eCLIP7.54□□□□□ -1.2
CDH8-203ENST00000577390 C17orf99Q6UX52 265 aa7.54□□□□□ -1.2
CDH8-203ENST00000577390 PQLC2Q6ZP29 291 aa7.54□□□□□ -1.2
CDH8-203ENST00000577390 OR52E5Q8NH55 327 aa7.54□□□□□ -1.2
CDH8-203ENST00000577390 SLC50A1Q9BRV3 221 aa7.54□□□□□ -1.2
CDH8-203ENST00000577390 CTXND1A0A1B0GTU2 59 aa7.54□□□□□ -1.2
CDH8-203ENST00000577390 C15orf61A6NNL5 157 aa7.54□□□□□ -1.2
CDH8-203ENST00000577390 MMD2Q8IY49 270 aa7.54□□□□□ -1.2
CDH8-203ENST00000577390 RNF114Q9Y508 228 aa7.54□□□□□ -1.2
CDH8-203ENST00000577390 APOBEC3AP31941 199 aaPredicted RBP7.54□□□□□ -1.2
CDH8-203ENST00000577390 HLA-DRB1P01911 266 aa7.54□□□□□ -1.2
CDH8-203ENST00000577390 SMIM2Q9BVW6 85 aa7.54□□□□□ -1.2
CDH8-203ENST00000577390 TAL2Q16559 108 aa7.54□□□□□ -1.2
CDH8-203ENST00000577390 TMEM240Q5SV17 173 aa7.54□□□□□ -1.2
CDH8-203ENST00000577390 TEX22C9J3V5 150 aa7.53□□□□□ -1.2
CDH8-203ENST00000577390 IGKV1D-33P01593 117 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms