RNA–Protein interactions for RNA: ENST00000577001.1

PRPF8-216, Transcript of pre-mRNA processing factor 8, human

TSL 5

Gene PRPF8, Length 3,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRPF8-216	ENST00000577001	BSPH1	Q075Z2	132 aa		12.03	□□□□□ -0.48
PRPF8-216	ENST00000577001	IBA57	Q5T440	356 aa	Known RBP	12.03	□□□□□ -0.48
PRPF8-216	ENST00000577001	TMEM68	Q96MH6	324 aa		12.03	□□□□□ -0.48
PRPF8-216	ENST00000577001	ISLR	O14498	428 aa		12.02	□□□□□ -0.48
PRPF8-216	ENST00000577001	COX7A2P2	O60397	106 aa		12.02	□□□□□ -0.48
PRPF8-216	ENST00000577001	IGHG3	P01860	377 aa		12.02	□□□□□ -0.48
PRPF8-216	ENST00000577001	KLF17	Q5JT82	389 aa	Predicted RBP	12.02	□□□□□ -0.48
PRPF8-216	ENST00000577001	RNASEK	Q6P5S7	137 aa	Known RBP	12.02	□□□□□ -0.48
PRPF8-216	ENST00000577001	IL36B	Q9NZH7	164 aa		12.02	□□□□□ -0.48
PRPF8-216	ENST00000577001	PTPRB	P23467	1997 aa		12.02	□□□□□ -0.49
PRPF8-216	ENST00000577001	ZNF883	P0CG24	379 aa		12.02	□□□□□ -0.49
PRPF8-216	ENST00000577001	AREG	P15514	252 aa		12.02	□□□□□ -0.49
PRPF8-216	ENST00000577001	CD40	P25942	277 aa		12.02	□□□□□ -0.49
PRPF8-216	ENST00000577001	TAS2R60	P59551	318 aa		12.02	□□□□□ -0.49
PRPF8-216	ENST00000577001	MMD	Q15546	238 aa		12.02	□□□□□ -0.49
PRPF8-216	ENST00000577001	TNXA	Q16473	311 aa		12.02	□□□□□ -0.49
PRPF8-216	ENST00000577001		Q56UQ5	140 aa		12.02	□□□□□ -0.49
PRPF8-216	ENST00000577001	OR52E5	Q8NH55	327 aa		12.02	□□□□□ -0.49
PRPF8-216	ENST00000577001	PRR7	Q8TB68	274 aa		12.02	□□□□□ -0.49
PRPF8-216	ENST00000577001	DOPEY2	Q9Y3R5	2298 aa		12.02	□□□□□ -0.49
PRPF8-216	ENST00000577001	WT1-AS	Q06250	92 aa		12.01	□□□□□ -0.49
PRPF8-216	ENST00000577001	VWC2	Q2TAL6	325 aa		12.01	□□□□□ -0.49
PRPF8-216	ENST00000577001	TMEM106B	Q9NUM4	274 aa		12.01	□□□□□ -0.49
PRPF8-216	ENST00000577001	CLEC5A	Q9NY25	188 aa		12.01	□□□□□ -0.49
PRPF8-216	ENST00000577001	VENTX	O95231	258 aa		12.01	□□□□□ -0.49
PRPF8-216	ENST00000577001	IGLV1-44	P01699	117 aa		12.01	□□□□□ -0.49
PRPF8-216	ENST00000577001	FAM87A	P0C7U9	286 aa		12.01	□□□□□ -0.49
PRPF8-216	ENST00000577001	USF1	P22415	310 aa	Predicted RBP	12.01	□□□□□ -0.49
PRPF8-216	ENST00000577001	FXYD7	P58549	80 aa		12.01	□□□□□ -0.49
PRPF8-216	ENST00000577001	SLA	Q13239	276 aa		12.01	□□□□□ -0.49
PRPF8-216	ENST00000577001	RTL8B	Q17RB0	113 aa		12.01	□□□□□ -0.49
PRPF8-216	ENST00000577001	TMEM144	Q7Z5S9	345 aa		12.01	□□□□□ -0.49
PRPF8-216	ENST00000577001		V9GYV3	84 aa		12.01	□□□□□ -0.49
PRPF8-216	ENST00000577001	RAI1	Q7Z5J4	1906 aa	Predicted RBP	12.01	□□□□□ -0.49
PRPF8-216	ENST00000577001	TMSB15B	A0A087X1C1	80 aa		12.01	□□□□□ -0.49
PRPF8-216	ENST00000577001	IGHV3-23	P01764	117 aa		12.01	□□□□□ -0.49
PRPF8-216	ENST00000577001	GLRX	P35754	106 aa		12.01	□□□□□ -0.49
PRPF8-216	ENST00000577001	OR5R1	Q8NH85	324 aa		12.01	□□□□□ -0.49
PRPF8-216	ENST00000577001	DDB2	Q92466	427 aa		12.01	□□□□□ -0.49
PRPF8-216	ENST00000577001	VAMP8	Q9BV40	100 aa		12.01	□□□□□ -0.49
PRPF8-216	ENST00000577001	DYNLRB1	Q9NP97	96 aa		12.01	□□□□□ -0.49
PRPF8-216	ENST00000577001	LSM4	Q9Y4Z0	139 aa	Known RBP	12.01	□□□□□ -0.49
PRPF8-216	ENST00000577001	DIRC3	C9JPN6	131 aa		12	□□□□□ -0.49
PRPF8-216	ENST00000577001	MBNL2	Q5VZF2	373 aa	Known RBP	12	□□□□□ -0.49
PRPF8-216	ENST00000577001	TMEM200B	Q69YZ2	307 aa		12	□□□□□ -0.49
PRPF8-216	ENST00000577001	PIGBOS1	A0A0B4J2F0	54 aa		12	□□□□□ -0.49
PRPF8-216	ENST00000577001	DPRX	A6NFQ7	191 aa		12	□□□□□ -0.49
PRPF8-216	ENST00000577001	UPK2	O00526	184 aa		12	□□□□□ -0.49
PRPF8-216	ENST00000577001	SNAI2	O43623	268 aa		12	□□□□□ -0.49
PRPF8-216	ENST00000577001	GCG	P01275	180 aa		12	□□□□□ -0.49
PRPF8-216	ENST00000577001	TPPP2	P59282	170 aa		12	□□□□□ -0.49
PRPF8-216	ENST00000577001	ZNF439	Q8NDP4	499 aa		12	□□□□□ -0.49
PRPF8-216	ENST00000577001	ZNF430	Q9H8G1	570 aa	Predicted RBP	12	□□□□□ -0.49
PRPF8-216	ENST00000577001	SLC25A5	P05141	298 aa	Known RBP	11.99	□□□□□ -0.49
PRPF8-216	ENST00000577001	NPS	P0C0P6	89 aa		11.99	□□□□□ -0.49
PRPF8-216	ENST00000577001	LINC01560	Q8TB33	94 aa		11.99	□□□□□ -0.49
PRPF8-216	ENST00000577001	TMEM14B	Q9NUH8	114 aa		11.99	□□□□□ -0.49
PRPF8-216	ENST00000577001	SLC45A2	Q9UMX9	530 aa		11.99	□□□□□ -0.49
PRPF8-216	ENST00000577001	CSPG4	Q6UVK1	2322 aa		11.99	□□□□□ -0.49
PRPF8-216	ENST00000577001	PGP	A6NDG6	321 aa		11.99	□□□□□ -0.49
PRPF8-216	ENST00000577001	PLGLA	Q15195	96 aa		11.99	□□□□□ -0.49
PRPF8-216	ENST00000577001	SLC35E1	Q96K37	410 aa		11.99	□□□□□ -0.49
PRPF8-216	ENST00000577001	DIRC2	Q96SL1	478 aa		11.99	□□□□□ -0.49
PRPF8-216	ENST00000577001	SLC25A33	Q9BSK2	321 aa		11.99	□□□□□ -0.49
PRPF8-216	ENST00000577001	RNASE2	P10153	161 aa	Known RBP	11.99	□□□□□ -0.49
PRPF8-216	ENST00000577001	CCKAR	P32238	428 aa		11.99	□□□□□ -0.49
PRPF8-216	ENST00000577001	HINT1	P49773	126 aa	Predicted RBP	11.99	□□□□□ -0.49
PRPF8-216	ENST00000577001	NRN1	Q9NPD7	142 aa		11.99	□□□□□ -0.49
PRPF8-216	ENST00000577001	IL19	Q9UHD0	177 aa		11.99	□□□□□ -0.49
PRPF8-216	ENST00000577001	MT-CO2	P00403	227 aa		11.98	□□□□□ -0.49
PRPF8-216	ENST00000577001	GUSBP1	Q15486	140 aa		11.98	□□□□□ -0.49
PRPF8-216	ENST00000577001	LINC00305	Q7Z4B0	112 aa		11.98	□□□□□ -0.49
PRPF8-216	ENST00000577001	ZC2HC1A	Q96GY0	325 aa		11.98	□□□□□ -0.49
PRPF8-216	ENST00000577001	TXN2	Q99757	166 aa		11.98	□□□□□ -0.49
PRPF8-216	ENST00000577001	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	11.98	□□□□□ -0.49
PRPF8-216	ENST00000577001		M0R143	59 aa		11.98	□□□□□ -0.49
PRPF8-216	ENST00000577001	F2RL2	O00254	374 aa		11.98	□□□□□ -0.49
PRPF8-216	ENST00000577001	GRN	P28799	593 aa	Known RBP	11.98	□□□□□ -0.49
PRPF8-216	ENST00000577001	LYZ	P61626	148 aa		11.98	□□□□□ -0.49
PRPF8-216	ENST00000577001	RPL19	P84098	196 aa	Known RBP	11.98	□□□□□ -0.49
PRPF8-216	ENST00000577001	PGLYRP4	Q96LB8	373 aa		11.98	□□□□□ -0.49
PRPF8-216	ENST00000577001	HILPDA	Q9Y5L2	63 aa		11.98	□□□□□ -0.49
PRPF8-216	ENST00000577001	COL27A1	Q8IZC6	1860 aa	Predicted RBP	11.98	□□□□□ -0.49
PRPF8-216	ENST00000577001	ABHD17A	Q96GS6	310 aa		11.98	□□□□□ -0.49
PRPF8-216	ENST00000577001	PAXX	Q9BUH6	204 aa		11.98	□□□□□ -0.49
PRPF8-216	ENST00000577001	PARD6G	Q9BYG4	376 aa	Predicted RBP	11.98	□□□□□ -0.49
PRPF8-216	ENST00000577001	RBP4	P02753	201 aa		11.97	□□□□□ -0.49
PRPF8-216	ENST00000577001	IGFL4	Q6B9Z1	124 aa		11.97	□□□□□ -0.49
PRPF8-216	ENST00000577001	PATE2	Q6UY27	113 aa		11.97	□□□□□ -0.49
PRPF8-216	ENST00000577001	LINC00173	Q6ZV60	143 aa		11.97	□□□□□ -0.49
PRPF8-216	ENST00000577001	EXOC3-AS1	Q8N2X6	119 aa		11.97	□□□□□ -0.49
PRPF8-216	ENST00000577001	APOA2	P02652	100 aa		11.97	□□□□□ -0.49
PRPF8-216	ENST00000577001	TNFSF4	P23510	183 aa		11.97	□□□□□ -0.49
PRPF8-216	ENST00000577001	RAB7A	P51149	207 aa		11.97	□□□□□ -0.49
PRPF8-216	ENST00000577001	ERH	P84090	104 aa	Known RBP	11.97	□□□□□ -0.49
PRPF8-216	ENST00000577001	PRR20E	P86478	221 aa		11.97	□□□□□ -0.49
PRPF8-216	ENST00000577001	PRR20C	P86479	221 aa		11.97	□□□□□ -0.49
PRPF8-216	ENST00000577001	PRR20D	P86480	221 aa		11.97	□□□□□ -0.49
PRPF8-216	ENST00000577001	PRR20B	P86481	221 aa		11.97	□□□□□ -0.49
PRPF8-216	ENST00000577001	PRR20A	P86496	221 aa		11.97	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 141.4 ms