RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 AGRNO00468 2067 aa8.38□□□□□ -1.07
CTDNEP1-212ENST00000576613 TMEM127O75204 238 aa8.38□□□□□ -1.07
CTDNEP1-212ENST00000576613 TMEM50AO95807 157 aa8.38□□□□□ -1.07
CTDNEP1-212ENST00000576613 IFNA21P01568 189 aa8.38□□□□□ -1.07
CTDNEP1-212ENST00000576613 IFNA17P01571 189 aa8.38□□□□□ -1.07
CTDNEP1-212ENST00000576613 CRYBB3P26998 211 aa8.38□□□□□ -1.07
CTDNEP1-212ENST00000576613 IZUMO2Q6UXV1 221 aa8.38□□□□□ -1.07
CTDNEP1-212ENST00000576613 UBE2DNLQ8IWF7 75 aa8.38□□□□□ -1.07
CTDNEP1-212ENST00000576613 DCANP1Q8TF63 244 aa8.38□□□□□ -1.07
CTDNEP1-212ENST00000576613 MRGPRFQ96AM1 343 aa8.38□□□□□ -1.07
CTDNEP1-212ENST00000576613 S100A16Q96FQ6 103 aaKnown RBP8.38□□□□□ -1.07
CTDNEP1-212ENST00000576613 DNAH17Q9UFH2 4485 aa8.38□□□□□ -1.07
CTDNEP1-212ENST00000576613 HELTA6NFD8 242 aa8.37□□□□□ -1.07
CTDNEP1-212ENST00000576613 CLEC2LP0C7M8 214 aa8.37□□□□□ -1.07
CTDNEP1-212ENST00000576613 SUB1P53999 127 aaKnown RBP eCLIP8.37□□□□□ -1.07
CTDNEP1-212ENST00000576613 TMEM69Q5SWH9 247 aa8.37□□□□□ -1.07
CTDNEP1-212ENST00000576613 TBC1D26Q86UD7 250 aa8.37□□□□□ -1.07
CTDNEP1-212ENST00000576613 SPARTQ8N0X7 666 aa8.37□□□□□ -1.07
CTDNEP1-212ENST00000576613 SLC35G3Q8N808 338 aa8.37□□□□□ -1.07
CTDNEP1-212ENST00000576613 TMEM230Q96A57 120 aa8.37□□□□□ -1.07
CTDNEP1-212ENST00000576613 ANAPC10Q9UM13 185 aa8.37□□□□□ -1.07
CTDNEP1-212ENST00000576613 LOC100506127A0A0U1RQW1 187 aa8.36□□□□□ -1.07
CTDNEP1-212ENST00000576613 SPART-AS1P0CW21 52 aa8.36□□□□□ -1.07
CTDNEP1-212ENST00000576613 NAT1P18440 290 aa8.36□□□□□ -1.07
CTDNEP1-212ENST00000576613 HRH1P35367 487 aa8.36□□□□□ -1.07
CTDNEP1-212ENST00000576613 AP2S1P53680 142 aaPredicted RBP8.36□□□□□ -1.07
CTDNEP1-212ENST00000576613 TSPAN5P62079 268 aa8.36□□□□□ -1.07
CTDNEP1-212ENST00000576613 DHRS2Q13268 280 aa8.36□□□□□ -1.07
CTDNEP1-212ENST00000576613 SPINK9Q5DT21 86 aa8.36□□□□□ -1.07
CTDNEP1-212ENST00000576613 PSMG4Q5JS54 123 aa8.36□□□□□ -1.07
CTDNEP1-212ENST00000576613 UBE2NLQ5JXB2 153 aa8.36□□□□□ -1.07
CTDNEP1-212ENST00000576613 FAM210BQ96KR6 192 aa8.36□□□□□ -1.07
CTDNEP1-212ENST00000576613 RAB40CQ96S21 281 aa8.36□□□□□ -1.07
CTDNEP1-212ENST00000576613 PDCD10Q9BUL8 212 aa8.36□□□□□ -1.07
CTDNEP1-212ENST00000576613 IGLV2-18A0A075B6J9 118 aa8.35□□□□□ -1.07
CTDNEP1-212ENST00000576613 TMEM189A5PLL7 270 aa8.35□□□□□ -1.07
CTDNEP1-212ENST00000576613 INS-IGF2F8WCM5 200 aa8.35□□□□□ -1.07
CTDNEP1-212ENST00000576613 CLN5O75503 358 aa8.35□□□□□ -1.07
CTDNEP1-212ENST00000576613 IGKV1-39P01597 117 aa8.35□□□□□ -1.07
CTDNEP1-212ENST00000576613 CD74P04233 296 aa8.35□□□□□ -1.07
CTDNEP1-212ENST00000576613 IGKV1D-39P04432 117 aa8.35□□□□□ -1.07
CTDNEP1-212ENST00000576613 OPRK1P41145 380 aa8.35□□□□□ -1.07
CTDNEP1-212ENST00000576613 PPP5CP53041 499 aa8.35□□□□□ -1.07
CTDNEP1-212ENST00000576613 SNRPD3P62318 126 aaKnown RBP8.35□□□□□ -1.07
CTDNEP1-212ENST00000576613 ZNF575Q86XF7 245 aa8.35□□□□□ -1.07
CTDNEP1-212ENST00000576613 CROCCP3Q8IVE0 287 aa8.35□□□□□ -1.07
CTDNEP1-212ENST00000576613 OR4X1Q8NH49 305 aa8.35□□□□□ -1.07
CTDNEP1-212ENST00000576613 SCRT1Q9BWW7 348 aa8.35□□□□□ -1.07
CTDNEP1-212ENST00000576613 RNF167Q9H6Y7 350 aa8.35□□□□□ -1.07
CTDNEP1-212ENST00000576613 PLA2G2EQ9NZK7 142 aa8.35□□□□□ -1.07
CTDNEP1-212ENST00000576613 XCL2Q9UBD3 114 aa8.35□□□□□ -1.07
CTDNEP1-212ENST00000576613 RAB26Q9ULW5 256 aa8.35□□□□□ -1.07
CTDNEP1-212ENST00000576613 DNAH11Q96DT5 4516 aa8.35□□□□□ -1.07
CTDNEP1-212ENST00000576613 TRAV30A0A087WSZ9 112 aa8.34□□□□□ -1.07
CTDNEP1-212ENST00000576613 TEX48A0A1B0GUV7 120 aa8.34□□□□□ -1.07
CTDNEP1-212ENST00000576613 ANKRD65E5RJM6 399 aa8.34□□□□□ -1.07
CTDNEP1-212ENST00000576613 HLA-DMAP28067 261 aa8.34□□□□□ -1.07
CTDNEP1-212ENST00000576613 PRSS3P35030 304 aa8.34□□□□□ -1.07
CTDNEP1-212ENST00000576613 HOXA1P49639 335 aaPredicted RBP8.34□□□□□ -1.07
CTDNEP1-212ENST00000576613 AKR1C2P52895 323 aa8.34□□□□□ -1.07
CTDNEP1-212ENST00000576613 TAS2R20P59543 309 aa8.34□□□□□ -1.07
CTDNEP1-212ENST00000576613 Q6ZR54 194 aa8.34□□□□□ -1.07
CTDNEP1-212ENST00000576613 Q6ZRM9 215 aa8.34□□□□□ -1.07
CTDNEP1-212ENST00000576613 ENY2Q9NPA8 101 aa8.34□□□□□ -1.07
CTDNEP1-212ENST00000576613 ABCA13Q86UQ4 5058 aa8.34□□□□□ -1.08
CTDNEP1-212ENST00000576613 SMIM9A6NGZ8 99 aa8.33□□□□□ -1.08
CTDNEP1-212ENST00000576613 ATG12O94817 140 aa8.33□□□□□ -1.08
CTDNEP1-212ENST00000576613 RNASE2P10153 161 aaKnown RBP8.33□□□□□ -1.08
CTDNEP1-212ENST00000576613 RPL5P46777 297 aaKnown RBP8.33□□□□□ -1.08
CTDNEP1-212ENST00000576613 UCP3P55916 312 aa8.33□□□□□ -1.08
CTDNEP1-212ENST00000576613 IZUMO4Q1ZYL8 232 aa8.33□□□□□ -1.08
CTDNEP1-212ENST00000576613 RNF212Q495C1 297 aa8.33□□□□□ -1.08
CTDNEP1-212ENST00000576613 C1orf134Q5TEV5 83 aa8.33□□□□□ -1.08
CTDNEP1-212ENST00000576613 LYSMD2Q8IV50 215 aa8.33□□□□□ -1.08
CTDNEP1-212ENST00000576613 SAMD12Q8N8I0 201 aa8.33□□□□□ -1.08
CTDNEP1-212ENST00000576613 NEU1Q99519 415 aa8.33□□□□□ -1.08
CTDNEP1-212ENST00000576613 KRTAP4-5Q9BYR2 181 aa8.33□□□□□ -1.08
CTDNEP1-212ENST00000576613 FNDC4Q9H6D8 234 aaPredicted RBP8.33□□□□□ -1.08
CTDNEP1-212ENST00000576613 SEPSECSQ9HD40 501 aaKnown RBP8.33□□□□□ -1.08
CTDNEP1-212ENST00000576613 DYNC1H1Q14204 4646 aaKnown RBP8.33□□□□□ -1.08
CTDNEP1-212ENST00000576613 RPS10-NUDT3A0A1W2PQS6 291 aa8.32□□□□□ -1.08
CTDNEP1-212ENST00000576613 FAM90A26D6RGX4 464 aa8.32□□□□□ -1.08
CTDNEP1-212ENST00000576613 IGKV1-17P01599 117 aa8.32□□□□□ -1.08
CTDNEP1-212ENST00000576613 HNRNPCP07910 306 aaKnown RBP eCLIP8.32□□□□□ -1.08
CTDNEP1-212ENST00000576613 EMP1P54849 157 aa8.32□□□□□ -1.08
CTDNEP1-212ENST00000576613 TIGITQ495A1 244 aa8.32□□□□□ -1.08
CTDNEP1-212ENST00000576613 C16orf54Q6UWD8 224 aa8.32□□□□□ -1.08
CTDNEP1-212ENST00000576613 ZNF705AQ6ZN79 300 aaPredicted RBP8.32□□□□□ -1.08
CTDNEP1-212ENST00000576613 Q8WTZ3 238 aa8.32□□□□□ -1.08
CTDNEP1-212ENST00000576613 GLMPQ8WWB7 406 aa8.32□□□□□ -1.08
CTDNEP1-212ENST00000576613 NRN1Q9NPD7 142 aa8.32□□□□□ -1.08
CTDNEP1-212ENST00000576613 MRPL36Q9P0J6 103 aaKnown RBP8.32□□□□□ -1.08
CTDNEP1-212ENST00000576613 U3KQE9 123 aa8.32□□□□□ -1.08
CTDNEP1-212ENST00000576613 A0A0B4J293 547 aa8.31□□□□□ -1.08
CTDNEP1-212ENST00000576613 ZNF705FA8MVS1 300 aaPredicted RBP8.31□□□□□ -1.08
CTDNEP1-212ENST00000576613 H3BMM0 161 aa8.31□□□□□ -1.08
CTDNEP1-212ENST00000576613 GSTZ1O43708 216 aaPredicted RBP8.31□□□□□ -1.08
CTDNEP1-212ENST00000576613 IGKV1-5P01602 117 aa8.31□□□□□ -1.08
CTDNEP1-212ENST00000576613 ZNF705DP0CH99 300 aaPredicted RBP8.31□□□□□ -1.08
CTDNEP1-212ENST00000576613 ZNF705BP0CI00 300 aaPredicted RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms