RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 NPY1RP25929 384 aa11.52□□□□□ -0.57
SMG6-220ENST00000576218 FCGR2BP31994 310 aaPredicted RBP11.52□□□□□ -0.57
SMG6-220ENST00000576218 ADMP35318 185 aa11.52□□□□□ -0.57
SMG6-220ENST00000576218 PPP1R1AQ13522 171 aa11.52□□□□□ -0.57
SMG6-220ENST00000576218 C7orf50Q9BRJ6 194 aaKnown RBP11.52□□□□□ -0.57
SMG6-220ENST00000576218 GINS3Q9BRX5 216 aa11.52□□□□□ -0.57
SMG6-220ENST00000576218 C15orf62A8K5M9 175 aa11.51□□□□□ -0.57
SMG6-220ENST00000576218 IL7P13232 177 aa11.51□□□□□ -0.57
SMG6-220ENST00000576218 BMI1P35226 326 aa11.51□□□□□ -0.57
SMG6-220ENST00000576218 TNFRSF9Q07011 255 aa11.51□□□□□ -0.57
SMG6-220ENST00000576218 AARDQ4LEZ3 155 aa11.51□□□□□ -0.57
SMG6-220ENST00000576218 NMSQ5H8A3 153 aa11.51□□□□□ -0.57
SMG6-220ENST00000576218 SBSPONQ8IVN8 264 aa11.51□□□□□ -0.57
SMG6-220ENST00000576218 Q8N1Y9 231 aa11.51□□□□□ -0.57
SMG6-220ENST00000576218 DTD1Q8TEA8 209 aa11.51□□□□□ -0.57
SMG6-220ENST00000576218 TRAV25A0A0B4J276 109 aa11.5□□□□□ -0.57
SMG6-220ENST00000576218 A0A1B0GU03 582 aa11.5□□□□□ -0.57
SMG6-220ENST00000576218 ZNF785A8K8V0 405 aa11.5□□□□□ -0.57
SMG6-220ENST00000576218 NDUFB6O95139 128 aa11.5□□□□□ -0.57
SMG6-220ENST00000576218 CD7P09564 240 aa11.5□□□□□ -0.57
SMG6-220ENST00000576218 UBE2MP61081 183 aaKnown RBP11.5□□□□□ -0.57
SMG6-220ENST00000576218 C4orf46Q504U0 113 aa11.5□□□□□ -0.57
SMG6-220ENST00000576218 ETFRF1Q6IPR1 90 aa11.5□□□□□ -0.57
SMG6-220ENST00000576218 ZNF600Q6ZNG1 722 aa11.5□□□□□ -0.57
SMG6-220ENST00000576218 RBKSQ9H477 322 aa11.5□□□□□ -0.57
SMG6-220ENST00000576218 PAIP2BQ9ULR5 123 aaKnown RBP11.5□□□□□ -0.57
SMG6-220ENST00000576218 IGHV3-49A0A0A0MS15 119 aa11.49□□□□□ -0.57
SMG6-220ENST00000576218 TRAV14DV4A0A0A6YYC5 116 aa11.49□□□□□ -0.57
SMG6-220ENST00000576218 OR11H12B2RN74 326 aa11.49□□□□□ -0.57
SMG6-220ENST00000576218 K7EMT4 169 aa11.49□□□□□ -0.57
SMG6-220ENST00000576218 IFNA4P05014 189 aa11.49□□□□□ -0.57
SMG6-220ENST00000576218 HOXB5P09067 269 aa11.49□□□□□ -0.57
SMG6-220ENST00000576218 C8orf88P0DMB2 117 aa11.49□□□□□ -0.57
SMG6-220ENST00000576218 C2orf83Q53S99 150 aa11.49□□□□□ -0.57
SMG6-220ENST00000576218 TMEM116Q8NCL8 245 aa11.49□□□□□ -0.57
SMG6-220ENST00000576218 COQ8AQ8NI60 647 aa11.49□□□□□ -0.57
SMG6-220ENST00000576218 RNASEH2CQ8TDP1 164 aaKnown RBP11.49□□□□□ -0.57
SMG6-220ENST00000576218 SRD5A3Q9H8P0 318 aa11.49□□□□□ -0.57
SMG6-220ENST00000576218 HSPB7Q9UBY9 170 aa11.49□□□□□ -0.57
SMG6-220ENST00000576218 TMED3Q9Y3Q3 217 aa11.49□□□□□ -0.57
SMG6-220ENST00000576218 PUS1Q9Y606 427 aaKnown RBP eCLIP11.49□□□□□ -0.57
SMG6-220ENST00000576218 TRAV30A0A087WSZ9 112 aa11.48□□□□□ -0.57
SMG6-220ENST00000576218 IGHV7-4-1A0A0J9YVY3 117 aa11.48□□□□□ -0.57
SMG6-220ENST00000576218 CLN5O75503 358 aa11.48□□□□□ -0.57
SMG6-220ENST00000576218 MED6O75586 246 aa11.48□□□□□ -0.57
SMG6-220ENST00000576218 TMEM50AO95807 157 aa11.48□□□□□ -0.57
SMG6-220ENST00000576218 SLC25A4P12235 298 aa11.48□□□□□ -0.57
SMG6-220ENST00000576218 BSXQ3C1V8 233 aa11.48□□□□□ -0.57
SMG6-220ENST00000576218 DEFB125Q8N687 156 aa11.48□□□□□ -0.57
SMG6-220ENST00000576218 OR4X1Q8NH49 305 aa11.48□□□□□ -0.57
SMG6-220ENST00000576218 NARS2Q96I59 477 aaKnown RBP11.48□□□□□ -0.57
SMG6-220ENST00000576218 WWC2-AS2Q96NR7 200 aa11.48□□□□□ -0.57
SMG6-220ENST00000576218 RCHY1Q96PM5 261 aa11.48□□□□□ -0.57
SMG6-220ENST00000576218 SDHCQ99643 169 aaPredicted RBP11.48□□□□□ -0.57
SMG6-220ENST00000576218 SPAG8Q99932 426 aaPredicted RBP11.48□□□□□ -0.57
SMG6-220ENST00000576218 RHPN1-AS1Q9BWJ2 59 aa11.48□□□□□ -0.57
SMG6-220ENST00000576218 FNDC4Q9H6D8 234 aaPredicted RBP11.48□□□□□ -0.57
SMG6-220ENST00000576218 FLVCR2Q9UPI3 526 aa11.48□□□□□ -0.57
SMG6-220ENST00000576218 U3KQ87 197 aa11.48□□□□□ -0.57
SMG6-220ENST00000576218 IGHV3OR16-13A0A075B7E8 117 aa11.47□□□□□ -0.57
SMG6-220ENST00000576218 IGHV3-74A0A0B4J1X5 117 aa11.47□□□□□ -0.57
SMG6-220ENST00000576218 C9orf170A2RU37 121 aa11.47□□□□□ -0.57
SMG6-220ENST00000576218 OR4C46A6NHA9 309 aa11.47□□□□□ -0.57
SMG6-220ENST00000576218 A8MZ25 164 aa11.47□□□□□ -0.57
SMG6-220ENST00000576218 LYRM1O43325 122 aa11.47□□□□□ -0.57
SMG6-220ENST00000576218 IFNA21P01568 189 aa11.47□□□□□ -0.57
SMG6-220ENST00000576218 IAPPP10997 89 aa11.47□□□□□ -0.57
SMG6-220ENST00000576218 RND2P52198 227 aa11.47□□□□□ -0.57
SMG6-220ENST00000576218 MLANAQ16655 118 aa11.47□□□□□ -0.57
SMG6-220ENST00000576218 LRTM2Q8N967 370 aa11.47□□□□□ -0.57
SMG6-220ENST00000576218 S100ZQ8WXG8 99 aa11.47□□□□□ -0.57
SMG6-220ENST00000576218 ACY3Q96HD9 319 aa11.47□□□□□ -0.57
SMG6-220ENST00000576218 WFDC10AQ9H1F0 79 aa11.47□□□□□ -0.57
SMG6-220ENST00000576218 C19orf73Q9NVV2 129 aa11.47□□□□□ -0.57
SMG6-220ENST00000576218 SMPXQ9UHP9 88 aa11.47□□□□□ -0.57
SMG6-220ENST00000576218 IGKV3-7A0A075B6H7 116 aa11.46□□□□□ -0.57
SMG6-220ENST00000576218 WRBO00258 174 aa11.46□□□□□ -0.57
SMG6-220ENST00000576218 OR4E1P0C645 316 aa11.46□□□□□ -0.57
SMG6-220ENST00000576218 ANXA7P20073 488 aaKnown RBP11.46□□□□□ -0.57
SMG6-220ENST00000576218 OR10J1P30954 320 aa11.46□□□□□ -0.57
SMG6-220ENST00000576218 RAB11AP62491 216 aa11.46□□□□□ -0.57
SMG6-220ENST00000576218 RPL11P62913 178 aaKnown RBP11.46□□□□□ -0.57
SMG6-220ENST00000576218 RPP30P78346 268 aaKnown RBP11.46□□□□□ -0.57
SMG6-220ENST00000576218 CNPY1Q3B7I2 92 aa11.46□□□□□ -0.57
SMG6-220ENST00000576218 TIGITQ495A1 244 aa11.46□□□□□ -0.57
SMG6-220ENST00000576218 GGNBP1Q5YKI7 109 aa11.46□□□□□ -0.57
SMG6-220ENST00000576218 PVRIGQ6DKI7 326 aa11.46□□□□□ -0.57
SMG6-220ENST00000576218 TOMM20LQ6UXN7 152 aa11.46□□□□□ -0.57
SMG6-220ENST00000576218 OR1S2Q8NGQ3 325 aa11.46□□□□□ -0.57
SMG6-220ENST00000576218 OR10C1Q96KK4 312 aa11.46□□□□□ -0.57
SMG6-220ENST00000576218 METTL26Q96S19 204 aa11.46□□□□□ -0.57
SMG6-220ENST00000576218 CCDC32Q9BV29 185 aa11.46□□□□□ -0.57
SMG6-220ENST00000576218 TMEM231Q9H6L2 316 aa11.46□□□□□ -0.57
SMG6-220ENST00000576218 FAM90A26D6RGX4 464 aa11.45□□□□□ -0.58
SMG6-220ENST00000576218 CHEK1O14757 476 aa11.45□□□□□ -0.58
SMG6-220ENST00000576218 TSPAN4O14817 238 aa11.45□□□□□ -0.58
SMG6-220ENST00000576218 SLC25A6P12236 298 aa11.45□□□□□ -0.58
SMG6-220ENST00000576218 TFPI2P48307 235 aa11.45□□□□□ -0.58
SMG6-220ENST00000576218 PAFAH1B2P68402 229 aa11.45□□□□□ -0.58
SMG6-220ENST00000576218 DHRS2Q13268 280 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms