RNA–Protein interactions for RNA: ENST00000575431.1

CCDC40-214, Transcript of coiled-coil domain containing 40, humanhuman

TSL 3

Gene CCDC40, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-214ENST00000575431 RAB40CQ96S21 281 aa7.32□□□□□ -1.24
CCDC40-214ENST00000575431 GSKIPQ9P0R6 139 aa7.32□□□□□ -1.24
CCDC40-214ENST00000575431 WNK1Q9H4A3 2382 aa7.31□□□□□ -1.24
CCDC40-214ENST00000575431 IGHV3-21A0A0B4J1V1 117 aa7.31□□□□□ -1.24
CCDC40-214ENST00000575431 OR2T8A6NH00 312 aa7.31□□□□□ -1.24
CCDC40-214ENST00000575431 MPTX1A8MV57 137 aa7.31□□□□□ -1.24
CCDC40-214ENST00000575431 A8MWP6 167 aa7.31□□□□□ -1.24
CCDC40-214ENST00000575431 NDUFA4O00483 81 aa7.31□□□□□ -1.24
CCDC40-214ENST00000575431 SAP30O75446 220 aa7.31□□□□□ -1.24
CCDC40-214ENST00000575431 CLN5O75503 358 aa7.31□□□□□ -1.24
CCDC40-214ENST00000575431 CTSGP08311 255 aa7.31□□□□□ -1.24
CCDC40-214ENST00000575431 GPX4P36969 197 aaPredicted RBP7.31□□□□□ -1.24
CCDC40-214ENST00000575431 TAS2R30P59541 319 aa7.31□□□□□ -1.24
CCDC40-214ENST00000575431 CYCSP99999 105 aaKnown RBP7.31□□□□□ -1.24
CCDC40-214ENST00000575431 CD69Q07108 199 aa7.31□□□□□ -1.24
CCDC40-214ENST00000575431 TMEM116Q8NCL8 245 aa7.31□□□□□ -1.24
CCDC40-214ENST00000575431 OR4X1Q8NH49 305 aa7.31□□□□□ -1.24
CCDC40-214ENST00000575431 CACNG8Q8WXS5 425 aa7.31□□□□□ -1.24
CCDC40-214ENST00000575431 MARC2Q969Z3 335 aa7.31□□□□□ -1.24
CCDC40-214ENST00000575431 SMIM8Q96KF7 97 aa7.31□□□□□ -1.24
CCDC40-214ENST00000575431 ZNF436Q9C0F3 470 aaPredicted RBP7.31□□□□□ -1.24
CCDC40-214ENST00000575431 UFC1Q9Y3C8 167 aa7.31□□□□□ -1.24
CCDC40-214ENST00000575431 ZNF320A2RRD8 509 aa7.3□□□□□ -1.24
CCDC40-214ENST00000575431 C7orf66A4D0T2 115 aa7.3□□□□□ -1.24
CCDC40-214ENST00000575431 FAM25EA8MYX2 175 aa7.3□□□□□ -1.24
CCDC40-214ENST00000575431 F8W735 103 aaPredicted RBP7.3□□□□□ -1.24
CCDC40-214ENST00000575431 K7EMT4 169 aa7.3□□□□□ -1.24
CCDC40-214ENST00000575431 TSC22D2O75157 780 aa7.3□□□□□ -1.24
CCDC40-214ENST00000575431 SCAF4O95104 1147 aaKnown RBP7.3□□□□□ -1.24
CCDC40-214ENST00000575431 TMEM50AO95807 157 aa7.3□□□□□ -1.24
CCDC40-214ENST00000575431 SCGB1D2O95969 90 aa7.3□□□□□ -1.24
CCDC40-214ENST00000575431 PVALBP20472 110 aaPredicted RBP7.3□□□□□ -1.24
CCDC40-214ENST00000575431 ADMP35318 185 aa7.3□□□□□ -1.24
CCDC40-214ENST00000575431 POLR2GP62487 172 aaKnown RBP eCLIP7.3□□□□□ -1.24
CCDC40-214ENST00000575431 RGS21Q2M5E4 152 aa7.3□□□□□ -1.24
CCDC40-214ENST00000575431 OR2K2Q8NGT1 345 aa7.3□□□□□ -1.24
CCDC40-214ENST00000575431 TMEM170AQ8WVE7 144 aa7.3□□□□□ -1.24
CCDC40-214ENST00000575431 MAGT1Q9H0U3 335 aa7.3□□□□□ -1.24
CCDC40-214ENST00000575431 FNDC4Q9H6D8 234 aaPredicted RBP7.3□□□□□ -1.24
CCDC40-214ENST00000575431 MRPL27Q9P0M9 148 aaKnown RBP7.3□□□□□ -1.24
CCDC40-214ENST00000575431 STRAPQ9Y3F4 350 aaKnown RBP7.3□□□□□ -1.24
CCDC40-214ENST00000575431 C15orf62A8K5M9 175 aa7.29□□□□□ -1.24
CCDC40-214ENST00000575431 L7N2F9 121 aa7.29□□□□□ -1.24
CCDC40-214ENST00000575431 CCSO14618 274 aa7.29□□□□□ -1.24
CCDC40-214ENST00000575431 SSNA1O43805 119 aa7.29□□□□□ -1.24
CCDC40-214ENST00000575431 IGLV1-51P01701 117 aa7.29□□□□□ -1.24
CCDC40-214ENST00000575431 CSN3P07498 182 aa7.29□□□□□ -1.24
CCDC40-214ENST00000575431 IAPPP10997 89 aa7.29□□□□□ -1.24
CCDC40-214ENST00000575431 VAMP2P63027 116 aa7.29□□□□□ -1.24
CCDC40-214ENST00000575431 SPANXN5Q5MJ07 72 aa7.29□□□□□ -1.24
CCDC40-214ENST00000575431 PRSS54Q6PEW0 395 aa7.29□□□□□ -1.24
CCDC40-214ENST00000575431 IL34Q6ZMJ4 242 aa7.29□□□□□ -1.24
CCDC40-214ENST00000575431 ZNF600Q6ZNG1 722 aa7.29□□□□□ -1.24
CCDC40-214ENST00000575431 SLC16A13Q7RTY0 426 aa7.29□□□□□ -1.24
CCDC40-214ENST00000575431 OR1S2Q8NGQ3 325 aa7.29□□□□□ -1.24
CCDC40-214ENST00000575431 TMEM190Q8WZ59 177 aa7.29□□□□□ -1.24
CCDC40-214ENST00000575431 SLC35E1Q96K37 410 aa7.29□□□□□ -1.24
CCDC40-214ENST00000575431 GINS3Q9BRX5 216 aa7.29□□□□□ -1.24
CCDC40-214ENST00000575431 CHRDL1Q9BU40 450 aa7.29□□□□□ -1.24
CCDC40-214ENST00000575431 DAZ1Q9NQZ3 744 aaKnown RBP7.29□□□□□ -1.24
CCDC40-214ENST00000575431 TECRQ9NZ01 308 aaKnown RBP7.29□□□□□ -1.24
CCDC40-214ENST00000575431 PSENENQ9NZ42 101 aa7.29□□□□□ -1.24
CCDC40-214ENST00000575431 C2orf70A6NJV1 201 aa7.28□□□□□ -1.24
CCDC40-214ENST00000575431 SSSCA1O60232 199 aa7.28□□□□□ -1.24
CCDC40-214ENST00000575431 IGHV3-48P01763 117 aa7.28□□□□□ -1.24
CCDC40-214ENST00000575431 MBPP02686 304 aaPredicted RBP7.28□□□□□ -1.24
CCDC40-214ENST00000575431 FABP1P07148 127 aa7.28□□□□□ -1.24
CCDC40-214ENST00000575431 FOLR2P14207 255 aa7.28□□□□□ -1.24
CCDC40-214ENST00000575431 CBLN1P23435 193 aa7.28□□□□□ -1.24
CCDC40-214ENST00000575431 BMI1P35226 326 aa7.28□□□□□ -1.24
CCDC40-214ENST00000575431 RND2P52198 227 aa7.28□□□□□ -1.24
CCDC40-214ENST00000575431 YPEL3P61236 119 aaPredicted RBP7.28□□□□□ -1.24
CCDC40-214ENST00000575431 IL15RAQ13261 267 aa7.28□□□□□ -1.24
CCDC40-214ENST00000575431 MLANAQ16655 118 aa7.28□□□□□ -1.24
CCDC40-214ENST00000575431 DYNLRB2Q8TF09 96 aa7.28□□□□□ -1.24
CCDC40-214ENST00000575431 Q8WTZ3 238 aa7.28□□□□□ -1.24
CCDC40-214ENST00000575431 NMES1Q9C002 83 aa7.28□□□□□ -1.24
CCDC40-214ENST00000575431 ZC4H2Q9NQZ6 224 aa7.28□□□□□ -1.24
CCDC40-214ENST00000575431 PAIP2BQ9ULR5 123 aaKnown RBP7.28□□□□□ -1.24
CCDC40-214ENST00000575431 ZNF256Q9Y2P7 627 aaPredicted RBP7.28□□□□□ -1.24
CCDC40-214ENST00000575431 TMEM213A2RRL7 107 aa7.27□□□□□ -1.25
CCDC40-214ENST00000575431 K7EPK0 472 aa7.27□□□□□ -1.25
CCDC40-214ENST00000575431 GOSR2O14653 212 aa7.27□□□□□ -1.25
CCDC40-214ENST00000575431 YIF1AO95070 293 aa7.27□□□□□ -1.25
CCDC40-214ENST00000575431 RLN2P04090 185 aa7.27□□□□□ -1.25
CCDC40-214ENST00000575431 IGLC1P0CG04 106 aa7.27□□□□□ -1.25
CCDC40-214ENST00000575431 C8orf88P0DMB2 117 aa7.27□□□□□ -1.25
CCDC40-214ENST00000575431 SPNP16150 400 aa7.27□□□□□ -1.25
CCDC40-214ENST00000575431 DEFA6Q01524 100 aa7.27□□□□□ -1.25
CCDC40-214ENST00000575431 LCN12Q6JVE5 192 aa7.27□□□□□ -1.25
CCDC40-214ENST00000575431 TMEM14EPQ6UXP3 125 aa7.27□□□□□ -1.25
CCDC40-214ENST00000575431 UNQ9165/PRO28630Q6UXU0 137 aa7.27□□□□□ -1.25
CCDC40-214ENST00000575431 OR10P1Q8NGE3 313 aa7.27□□□□□ -1.25
CCDC40-214ENST00000575431 NPIPB3Q92617 1050 aa7.27□□□□□ -1.25
CCDC40-214ENST00000575431 ACY3Q96HD9 319 aa7.27□□□□□ -1.25
CCDC40-214ENST00000575431 C20orf24Q9BUV8 137 aa7.27□□□□□ -1.25
CCDC40-214ENST00000575431 MRPL36Q9P0J6 103 aaKnown RBP7.27□□□□□ -1.25
CCDC40-214ENST00000575431 RCL1Q9Y2P8 373 aaKnown RBP7.27□□□□□ -1.25
CCDC40-214ENST00000575431 LSM5Q9Y4Y9 91 aaKnown RBP7.27□□□□□ -1.25
CCDC40-214ENST00000575431 ANK2Q01484 3957 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms