RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 IFNA4P05014 189 aa9.77□□□□□ -0.85
TRAPPC1-206ENST00000573989 SLC25A4P12235 298 aa9.77□□□□□ -0.85
TRAPPC1-206ENST00000573989 RELQ04864 619 aaPredicted RBP9.77□□□□□ -0.85
TRAPPC1-206ENST00000573989 GSKIPQ9P0R6 139 aa9.77□□□□□ -0.85
TRAPPC1-206ENST00000573989 TRAV30A0A087WSZ9 112 aa9.76□□□□□ -0.85
TRAPPC1-206ENST00000573989 ZNF320A2RRD8 509 aa9.76□□□□□ -0.85
TRAPPC1-206ENST00000573989 C5orf51A6NDU8 294 aa9.76□□□□□ -0.85
TRAPPC1-206ENST00000573989 SCGB1D2O95969 90 aa9.76□□□□□ -0.85
TRAPPC1-206ENST00000573989 PTTG1O95997 202 aa9.76□□□□□ -0.85
TRAPPC1-206ENST00000573989 IAPPP10997 89 aa9.76□□□□□ -0.85
TRAPPC1-206ENST00000573989 DEFA6Q01524 100 aa9.76□□□□□ -0.85
TRAPPC1-206ENST00000573989 ID3Q02535 119 aa9.76□□□□□ -0.85
TRAPPC1-206ENST00000573989 EGFEM1PQ0D2K5 195 aa9.76□□□□□ -0.85
TRAPPC1-206ENST00000573989 GSG1LQ6UXU4 331 aa9.76□□□□□ -0.85
TRAPPC1-206ENST00000573989 OR4D5Q8NGN0 318 aa9.76□□□□□ -0.85
TRAPPC1-206ENST00000573989 MAGT1Q9H0U3 335 aa9.76□□□□□ -0.85
TRAPPC1-206ENST00000573989 ZC4H2Q9NQZ6 224 aa9.76□□□□□ -0.85
TRAPPC1-206ENST00000573989 SIGLEC8Q9NYZ4 499 aa9.76□□□□□ -0.85
TRAPPC1-206ENST00000573989 UFC1Q9Y3C8 167 aa9.76□□□□□ -0.85
TRAPPC1-206ENST00000573989 SORL1Q92673 2214 aa9.75□□□□□ -0.85
TRAPPC1-206ENST00000573989 MPTX1A8MV57 137 aa9.75□□□□□ -0.85
TRAPPC1-206ENST00000573989 NDUFA4O00483 81 aa9.75□□□□□ -0.85
TRAPPC1-206ENST00000573989 ELLP55199 621 aaPredicted RBP9.75□□□□□ -0.85
TRAPPC1-206ENST00000573989 ZBTB8BQ8NAP8 495 aaPredicted RBP9.75□□□□□ -0.85
TRAPPC1-206ENST00000573989 OR4X1Q8NH49 305 aa9.75□□□□□ -0.85
TRAPPC1-206ENST00000573989 OR10C1Q96KK4 312 aa9.75□□□□□ -0.85
TRAPPC1-206ENST00000573989 ZNF436Q9C0F3 470 aaPredicted RBP9.75□□□□□ -0.85
TRAPPC1-206ENST00000573989 PAIP2BQ9ULR5 123 aaKnown RBP9.75□□□□□ -0.85
TRAPPC1-206ENST00000573989 A8MWP6 167 aa9.74□□□□□ -0.85
TRAPPC1-206ENST00000573989 F8W735 103 aaPredicted RBP9.74□□□□□ -0.85
TRAPPC1-206ENST00000573989 CLN5O75503 358 aa9.74□□□□□ -0.85
TRAPPC1-206ENST00000573989 IGHV3-48P01763 117 aa9.74□□□□□ -0.85
TRAPPC1-206ENST00000573989 CTSGP08311 255 aa9.74□□□□□ -0.85
TRAPPC1-206ENST00000573989 POLR2GP62487 172 aaKnown RBP eCLIP9.74□□□□□ -0.85
TRAPPC1-206ENST00000573989 DYNLRB2Q8TF09 96 aa9.74□□□□□ -0.85
TRAPPC1-206ENST00000573989 MARC2Q969Z3 335 aa9.74□□□□□ -0.85
TRAPPC1-206ENST00000573989 C2orf50Q96LR7 162 aa9.74□□□□□ -0.85
TRAPPC1-206ENST00000573989 RAB40CQ96S21 281 aa9.74□□□□□ -0.85
TRAPPC1-206ENST00000573989 CHRDL1Q9BU40 450 aa9.74□□□□□ -0.85
TRAPPC1-206ENST00000573989 FNDC4Q9H6D8 234 aaPredicted RBP9.74□□□□□ -0.85
TRAPPC1-206ENST00000573989 STRAPQ9Y3F4 350 aaKnown RBP9.74□□□□□ -0.85
TRAPPC1-206ENST00000573989 IGHV3-35A0A0C4DH35 117 aa9.73□□□□□ -0.85
TRAPPC1-206ENST00000573989 CCSO14618 274 aa9.73□□□□□ -0.85
TRAPPC1-206ENST00000573989 SSNA1O43805 119 aa9.73□□□□□ -0.85
TRAPPC1-206ENST00000573989 SSSCA1O60232 199 aa9.73□□□□□ -0.85
TRAPPC1-206ENST00000573989 TMEM50AO95807 157 aa9.73□□□□□ -0.85
TRAPPC1-206ENST00000573989 CSN3P07498 182 aa9.73□□□□□ -0.85
TRAPPC1-206ENST00000573989 PVALBP20472 110 aaPredicted RBP9.73□□□□□ -0.85
TRAPPC1-206ENST00000573989 ADMP35318 185 aa9.73□□□□□ -0.85
TRAPPC1-206ENST00000573989 GPX4P36969 197 aaPredicted RBP9.73□□□□□ -0.85
TRAPPC1-206ENST00000573989 CD69Q07108 199 aa9.73□□□□□ -0.85
TRAPPC1-206ENST00000573989 SPANXN5Q5MJ07 72 aa9.73□□□□□ -0.85
TRAPPC1-206ENST00000573989 TMEM116Q8NCL8 245 aa9.73□□□□□ -0.85
TRAPPC1-206ENST00000573989 OR2K2Q8NGT1 345 aa9.73□□□□□ -0.85
TRAPPC1-206ENST00000573989 CACNG8Q8WXS5 425 aa9.73□□□□□ -0.85
TRAPPC1-206ENST00000573989 TMEM190Q8WZ59 177 aa9.73□□□□□ -0.85
TRAPPC1-206ENST00000573989 SLC35E1Q96K37 410 aa9.73□□□□□ -0.85
TRAPPC1-206ENST00000573989 SMIM8Q96KF7 97 aa9.73□□□□□ -0.85
TRAPPC1-206ENST00000573989 DAZ1Q9NQZ3 744 aaKnown RBP9.73□□□□□ -0.85
TRAPPC1-206ENST00000573989 TECRQ9NZ01 308 aaKnown RBP9.73□□□□□ -0.85
TRAPPC1-206ENST00000573989 PSENENQ9NZ42 101 aa9.73□□□□□ -0.85
TRAPPC1-206ENST00000573989 ZNF256Q9Y2P7 627 aaPredicted RBP9.73□□□□□ -0.85
TRAPPC1-206ENST00000573989 C2orf70A6NJV1 201 aa9.72□□□□□ -0.85
TRAPPC1-206ENST00000573989 C15orf62A8K5M9 175 aa9.72□□□□□ -0.85
TRAPPC1-206ENST00000573989 L7N2F9 121 aa9.72□□□□□ -0.85
TRAPPC1-206ENST00000573989 YIF1AO95070 293 aa9.72□□□□□ -0.85
TRAPPC1-206ENST00000573989 IGLV1-51P01701 117 aa9.72□□□□□ -0.85
TRAPPC1-206ENST00000573989 RND2P52198 227 aa9.72□□□□□ -0.85
TRAPPC1-206ENST00000573989 TAS2R30P59541 319 aa9.72□□□□□ -0.85
TRAPPC1-206ENST00000573989 VAMP2P63027 116 aa9.72□□□□□ -0.85
TRAPPC1-206ENST00000573989 CYCSP99999 105 aaKnown RBP9.72□□□□□ -0.85
TRAPPC1-206ENST00000573989 LCN12Q6JVE5 192 aa9.72□□□□□ -0.85
TRAPPC1-206ENST00000573989 PRSS54Q6PEW0 395 aa9.72□□□□□ -0.85
TRAPPC1-206ENST00000573989 IL34Q6ZMJ4 242 aa9.72□□□□□ -0.85
TRAPPC1-206ENST00000573989 ZNF600Q6ZNG1 722 aa9.72□□□□□ -0.85
TRAPPC1-206ENST00000573989 SLC16A13Q7RTY0 426 aa9.72□□□□□ -0.85
TRAPPC1-206ENST00000573989 OR1S2Q8NGQ3 325 aa9.72□□□□□ -0.85
TRAPPC1-206ENST00000573989 TMEM170AQ8WVE7 144 aa9.72□□□□□ -0.85
TRAPPC1-206ENST00000573989 GINS3Q9BRX5 216 aa9.72□□□□□ -0.85
TRAPPC1-206ENST00000573989 C20orf24Q9BUV8 137 aa9.72□□□□□ -0.85
TRAPPC1-206ENST00000573989 MRPL27Q9P0M9 148 aaKnown RBP9.72□□□□□ -0.85
TRAPPC1-206ENST00000573989 K7EMT4 169 aa9.71□□□□□ -0.86
TRAPPC1-206ENST00000573989 GOSR2O14653 212 aa9.71□□□□□ -0.86
TRAPPC1-206ENST00000573989 MBPP02686 304 aaPredicted RBP9.71□□□□□ -0.86
TRAPPC1-206ENST00000573989 FOLR2P14207 255 aa9.71□□□□□ -0.86
TRAPPC1-206ENST00000573989 CBLN1P23435 193 aa9.71□□□□□ -0.86
TRAPPC1-206ENST00000573989 OR10J1P30954 320 aa9.71□□□□□ -0.86
TRAPPC1-206ENST00000573989 BMI1P35226 326 aa9.71□□□□□ -0.86
TRAPPC1-206ENST00000573989 KRTAP10-11P60412 298 aa9.71□□□□□ -0.86
TRAPPC1-206ENST00000573989 MLANAQ16655 118 aa9.71□□□□□ -0.86
TRAPPC1-206ENST00000573989 RGS21Q2M5E4 152 aa9.71□□□□□ -0.86
TRAPPC1-206ENST00000573989 C11orf87Q6NUJ2 197 aa9.71□□□□□ -0.86
TRAPPC1-206ENST00000573989 UNQ9165/PRO28630Q6UXU0 137 aa9.71□□□□□ -0.86
TRAPPC1-206ENST00000573989 ACY3Q96HD9 319 aa9.71□□□□□ -0.86
TRAPPC1-206ENST00000573989 AURKAIP1Q9NWT8 199 aaPredicted RBP9.71□□□□□ -0.86
TRAPPC1-206ENST00000573989 LSM5Q9Y4Y9 91 aaKnown RBP9.71□□□□□ -0.86
TRAPPC1-206ENST00000573989 TMEM213A2RRL7 107 aa9.7□□□□□ -0.86
TRAPPC1-206ENST00000573989 H3BP45 60 aa9.7□□□□□ -0.86
TRAPPC1-206ENST00000573989 TSC22D2O75157 780 aa9.7□□□□□ -0.86
TRAPPC1-206ENST00000573989 SCAF4O95104 1147 aaKnown RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms