RNA–Protein interactions for RNA: ENST00000573521.1

PCDHGA9-201, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA9, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-201ENST00000573521 MOB4Q9Y3A3 225 aa10.3□□□□□ -0.76
PCDHGA9-201ENST00000573521 A0A1W2PRD5 423 aa10.3□□□□□ -0.76
PCDHGA9-201ENST00000573521 A0A1W2PRF3 423 aa10.3□□□□□ -0.76
PCDHGA9-201ENST00000573521 A0A1W2PRM7 423 aa10.3□□□□□ -0.76
PCDHGA9-201ENST00000573521 MYOD1P15172 320 aa10.3□□□□□ -0.76
PCDHGA9-201ENST00000573521 FBLN7Q53RD9 439 aa10.3□□□□□ -0.76
PCDHGA9-201ENST00000573521 GGNQ86UU5 652 aa10.3□□□□□ -0.76
PCDHGA9-201ENST00000573521 RPP25LQ8N5L8 163 aaKnown RBP10.3□□□□□ -0.76
PCDHGA9-201ENST00000573521 RNF125Q96EQ8 232 aa10.3□□□□□ -0.76
PCDHGA9-201ENST00000573521 FOXA3P55318 350 aaPredicted RBP10.29□□□□□ -0.76
PCDHGA9-201ENST00000573521 FOXL2P58012 376 aa10.29□□□□□ -0.76
PCDHGA9-201ENST00000573521 SPANXDQ9BXN6 97 aa10.29□□□□□ -0.76
PCDHGA9-201ENST00000573521 PLSCR4Q9NRQ2 329 aa10.29□□□□□ -0.76
PCDHGA9-201ENST00000573521 FBXL7Q9UJT9 491 aa10.29□□□□□ -0.76
PCDHGA9-201ENST00000573521 PSG8Q9UQ74 426 aa10.29□□□□□ -0.76
PCDHGA9-201ENST00000573521 DUSP14O95147 198 aaKnown RBP10.29□□□□□ -0.76
PCDHGA9-201ENST00000573521 SPINK2P20155 84 aa10.29□□□□□ -0.76
PCDHGA9-201ENST00000573521 TMEM249Q2WGJ8 235 aa10.29□□□□□ -0.76
PCDHGA9-201ENST00000573521 BRWD1Q9NSI6 2320 aa10.29□□□□□ -0.76
PCDHGA9-201ENST00000573521 ASCC3Q8N3C0 2202 aaKnown RBP10.29□□□□□ -0.76
PCDHGA9-201ENST00000573521 EPOPA6NHQ4 379 aa10.29□□□□□ -0.76
PCDHGA9-201ENST00000573521 ZNF837Q96EG3 531 aaPredicted RBP10.29□□□□□ -0.76
PCDHGA9-201ENST00000573521 MRPL16Q9NX20 251 aaKnown RBP10.29□□□□□ -0.76
PCDHGA9-201ENST00000573521 TRAV21A0A0B4J279 112 aa10.29□□□□□ -0.76
PCDHGA9-201ENST00000573521 A0A1W2PRS3 328 aa10.29□□□□□ -0.76
PCDHGA9-201ENST00000573521 CXCL1P09341 107 aa10.29□□□□□ -0.76
PCDHGA9-201ENST00000573521 FHL1Q13642 323 aa10.29□□□□□ -0.76
PCDHGA9-201ENST00000573521 ARTNQ5T4W7 220 aa10.29□□□□□ -0.76
PCDHGA9-201ENST00000573521 WNT10AQ9GZT5 417 aa10.29□□□□□ -0.76
PCDHGA9-201ENST00000573521 OVOL1O14753 267 aa10.28□□□□□ -0.76
PCDHGA9-201ENST00000573521 KLRB1Q12918 225 aa10.28□□□□□ -0.76
PCDHGA9-201ENST00000573521 C14orf144Q96I85 54 aa10.28□□□□□ -0.76
PCDHGA9-201ENST00000573521 SLC25A39Q9BZJ4 359 aaPredicted RBP10.28□□□□□ -0.76
PCDHGA9-201ENST00000573521 DLEU1O43261 78 aa10.28□□□□□ -0.76
PCDHGA9-201ENST00000573521 FOXI3A8MTJ6 420 aaPredicted RBP10.28□□□□□ -0.76
PCDHGA9-201ENST00000573521 DNAL4O96015 105 aa10.28□□□□□ -0.76
PCDHGA9-201ENST00000573521 RP1L1Q8IWN7 2480 aaPredicted RBP10.28□□□□□ -0.76
PCDHGA9-201ENST00000573521 EFNA2O43921 213 aa10.27□□□□□ -0.76
PCDHGA9-201ENST00000573521 CSRP1P21291 193 aaKnown RBP10.27□□□□□ -0.76
PCDHGA9-201ENST00000573521 LEPP41159 167 aa10.27□□□□□ -0.76
PCDHGA9-201ENST00000573521 RPRMLQ8N4K4 120 aa10.27□□□□□ -0.76
PCDHGA9-201ENST00000573521 FDCSPQ8NFU4 85 aa10.27□□□□□ -0.76
PCDHGA9-201ENST00000573521 MBNL3Q9NUK0 354 aaKnown RBP10.27□□□□□ -0.76
PCDHGA9-201ENST00000573521 TMEM160Q9NX00 188 aa10.27□□□□□ -0.76
PCDHGA9-201ENST00000573521 FOXF2Q12947 444 aa10.27□□□□□ -0.77
PCDHGA9-201ENST00000573521 COLCA1Q6ZS62 124 aa10.27□□□□□ -0.77
PCDHGA9-201ENST00000573521 ATG2BQ96BY7 2078 aa10.27□□□□□ -0.77
PCDHGA9-201ENST00000573521 IGKV1-5P01602 117 aa10.27□□□□□ -0.77
PCDHGA9-201ENST00000573521 OR2K2Q8NGT1 345 aa10.27□□□□□ -0.77
PCDHGA9-201ENST00000573521 PRSS2P07478 247 aa10.27□□□□□ -0.77
PCDHGA9-201ENST00000573521 OR9G9P0C7N8 305 aa10.27□□□□□ -0.77
PCDHGA9-201ENST00000573521 LTBRP36941 435 aa10.27□□□□□ -0.77
PCDHGA9-201ENST00000573521 PDE6HQ13956 83 aa10.27□□□□□ -0.77
PCDHGA9-201ENST00000573521 RRN3P1Q2M238 152 aa10.27□□□□□ -0.77
PCDHGA9-201ENST00000573521 MINOS1Q5TGZ0 78 aa10.27□□□□□ -0.77
PCDHGA9-201ENST00000573521 FAM90A2PQ658T7 463 aa10.27□□□□□ -0.77
PCDHGA9-201ENST00000573521 FOXC2Q99958 501 aa10.27□□□□□ -0.77
PCDHGA9-201ENST00000573521 FBXL15Q9H469 300 aa10.27□□□□□ -0.77
PCDHGA9-201ENST00000573521 MINOS1-NBL1R4GNA1 71 aa10.27□□□□□ -0.77
PCDHGA9-201ENST00000573521 MYOFQ9NZM1 2061 aa10.27□□□□□ -0.77
PCDHGA9-201ENST00000573521 SPTBP11277 2137 aa10.27□□□□□ -0.77
PCDHGA9-201ENST00000573521 A0A1B0GWB2 263 aa10.26□□□□□ -0.77
PCDHGA9-201ENST00000573521 NPFFO15130 113 aa10.26□□□□□ -0.77
PCDHGA9-201ENST00000573521 CEACAM4O75871 244 aa10.26□□□□□ -0.77
PCDHGA9-201ENST00000573521 FAM216BQ8N7L0 139 aa10.26□□□□□ -0.77
PCDHGA9-201ENST00000573521 IFI27L1Q96BM0 104 aa10.26□□□□□ -0.77
PCDHGA9-201ENST00000573521 ZNF492Q9P255 531 aa10.26□□□□□ -0.77
PCDHGA9-201ENST00000573521 CYSLTR1Q9Y271 337 aa10.26□□□□□ -0.77
PCDHGA9-201ENST00000573521 SCN2AQ99250 2005 aa10.26□□□□□ -0.77
PCDHGA9-201ENST00000573521 APELAP0DMC3 54 aa10.26□□□□□ -0.77
PCDHGA9-201ENST00000573521 MST1LQ2TV78 715 aa10.26□□□□□ -0.77
PCDHGA9-201ENST00000573521 RNASE6Q93091 150 aaKnown RBP10.26□□□□□ -0.77
PCDHGA9-201ENST00000573521 LEAP2Q969E1 77 aa10.26□□□□□ -0.77
PCDHGA9-201ENST00000573521 ATOH7Q8N100 152 aa10.26□□□□□ -0.77
PCDHGA9-201ENST00000573521 LMO1P25800 156 aa10.26□□□□□ -0.77
PCDHGA9-201ENST00000573521 CMC4P56277 68 aaPredicted RBP10.26□□□□□ -0.77
PCDHGA9-201ENST00000573521 PRSS8Q16651 343 aa10.26□□□□□ -0.77
PCDHGA9-201ENST00000573521 PYY3Q5JQD4 70 aa10.26□□□□□ -0.77
PCDHGA9-201ENST00000573521 Q6P435 159 aa10.26□□□□□ -0.77
PCDHGA9-201ENST00000573521 SPSB3Q6PJ21 355 aa10.26□□□□□ -0.77
PCDHGA9-201ENST00000573521 IGKV1-27A0A075B6S5 117 aa10.25□□□□□ -0.77
PCDHGA9-201ENST00000573521 TMEM50AO95807 157 aa10.25□□□□□ -0.77
PCDHGA9-201ENST00000573521 REG1AP05451 166 aa10.25□□□□□ -0.77
PCDHGA9-201ENST00000573521 ZNF56Q15929 161 aa10.25□□□□□ -0.77
PCDHGA9-201ENST00000573521 RNASE7Q9H1E1 156 aaKnown RBP10.25□□□□□ -0.77
PCDHGA9-201ENST00000573521 TNFRSF18Q9Y5U5 241 aa10.25□□□□□ -0.77
PCDHGA9-201ENST00000573521 KIF26BQ2KJY2 2108 aa10.25□□□□□ -0.77
PCDHGA9-201ENST00000573521 WNT2P09544 360 aa10.25□□□□□ -0.77
PCDHGA9-201ENST00000573521 NUP37Q8NFH4 326 aa10.25□□□□□ -0.77
PCDHGA9-201ENST00000573521 TRAV8-6A0A0B4J262 113 aa10.25□□□□□ -0.77
PCDHGA9-201ENST00000573521 RAMP3O60896 148 aa10.25□□□□□ -0.77
PCDHGA9-201ENST00000573521 CELA3AP09093 270 aa10.25□□□□□ -0.77
PCDHGA9-201ENST00000573521 SPATA31B1PQ5VZV4 182 aa10.25□□□□□ -0.77
PCDHGA9-201ENST00000573521 NUDT10Q8NFP7 164 aa10.25□□□□□ -0.77
PCDHGA9-201ENST00000573521 NUDT11Q96G61 164 aa10.25□□□□□ -0.77
PCDHGA9-201ENST00000573521 TMEM101Q96IK0 257 aa10.25□□□□□ -0.77
PCDHGA9-201ENST00000573521 TRGV3P03979 118 aa10.24□□□□□ -0.77
PCDHGA9-201ENST00000573521 C21orf62-AS1Q17RA5 79 aa10.24□□□□□ -0.77
PCDHGA9-201ENST00000573521 A0A1B0GWJ7 208 aa10.24□□□□□ -0.77
PCDHGA9-201ENST00000573521 C9orf106Q8NAJ2 232 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms