RNA–Protein interactions for RNA: ENST00000572949.5

USP6-204, Transcript of ubiquitin specific peptidase 6, humanhuman

TSL 2

Gene USP6, Length 7,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-204ENST00000572949 RNF223E7ERA6 249 aa7.95□□□□□ -1.14
USP6-204ENST00000572949 TRPM3Q9HCF6 1732 aaPredicted RBP7.95□□□□□ -1.14
USP6-204ENST00000572949 CENPVL1A0A0U1RR11 272 aa7.95□□□□□ -1.14
USP6-204ENST00000572949 LINC00587B1AMM8 73 aa7.95□□□□□ -1.14
USP6-204ENST00000572949 SLC25A16P16260 332 aa7.95□□□□□ -1.14
USP6-204ENST00000572949 SRSF6Q13247 344 aaKnown RBP7.95□□□□□ -1.14
USP6-204ENST00000572949 CIARTQ8N365 385 aaPredicted RBP7.95□□□□□ -1.14
USP6-204ENST00000572949 WDYHV1Q96HA8 205 aa7.95□□□□□ -1.14
USP6-204ENST00000572949 SMIM8Q96KF7 97 aa7.95□□□□□ -1.14
USP6-204ENST00000572949 RBM38Q9H0Z9 239 aaKnown RBP7.95□□□□□ -1.14
USP6-204ENST00000572949 LHX2P50458 406 aa7.94□□□□□ -1.14
USP6-204ENST00000572949 NANOS3P60323 173 aaKnown RBP7.94□□□□□ -1.14
USP6-204ENST00000572949 FAM90A1Q86YD7 464 aa7.94□□□□□ -1.14
USP6-204ENST00000572949 Q96MF0 132 aa7.94□□□□□ -1.14
USP6-204ENST00000572949 TMEM126AQ9H061 195 aa7.94□□□□□ -1.14
USP6-204ENST00000572949 MS4A6AQ9H2W1 248 aa7.94□□□□□ -1.14
USP6-204ENST00000572949 DLEC1Q9Y238 1755 aa7.94□□□□□ -1.14
USP6-204ENST00000572949 USF3Q68DE3 2245 aa7.94□□□□□ -1.14
USP6-204ENST00000572949 LOC285556D6RIA3 1793 aa7.94□□□□□ -1.14
USP6-204ENST00000572949 ZNF561-AS1K7EIQ3 104 aa7.94□□□□□ -1.14
USP6-204ENST00000572949 FSTP19883 344 aa7.94□□□□□ -1.14
USP6-204ENST00000572949 SDHCQ99643 169 aaPredicted RBP7.94□□□□□ -1.14
USP6-204ENST00000572949 APOHP02749 345 aaPredicted RBP7.94□□□□□ -1.14
USP6-204ENST00000572949 DAD1P61803 113 aa7.94□□□□□ -1.14
USP6-204ENST00000572949 C6orf226Q5I0X4 101 aa7.94□□□□□ -1.14
USP6-204ENST00000572949 RFLNBQ8N5W9 214 aa7.94□□□□□ -1.14
USP6-204ENST00000572949 TNFSF13O75888 250 aa7.94□□□□□ -1.14
USP6-204ENST00000572949 TYMSP04818 313 aa7.94□□□□□ -1.14
USP6-204ENST00000572949 SS18Q15532 418 aa7.94□□□□□ -1.14
USP6-204ENST00000572949 ORMDL3Q8N138 153 aa7.94□□□□□ -1.14
USP6-204ENST00000572949 CELA3BP08861 270 aa7.94□□□□□ -1.14
USP6-204ENST00000572949 GZMBP10144 247 aa7.94□□□□□ -1.14
USP6-204ENST00000572949 ATOH7Q8N100 152 aa7.94□□□□□ -1.14
USP6-204ENST00000572949 UQCR10Q9UDW1 63 aa7.94□□□□□ -1.14
USP6-204ENST00000572949 LAMB2P55268 1798 aa7.94□□□□□ -1.14
USP6-204ENST00000572949 BRD3OSQ6XYD6 125 aa7.94□□□□□ -1.14
USP6-204ENST00000572949 MESP2Q0VG99 397 aa7.93□□□□□ -1.14
USP6-204ENST00000572949 CYSLTR1Q9Y271 337 aa7.93□□□□□ -1.14
USP6-204ENST00000572949 UBR3Q6ZT12 1888 aa7.93□□□□□ -1.14
USP6-204ENST00000572949 OVOL1O14753 267 aa7.93□□□□□ -1.14
USP6-204ENST00000572949 IGFBP2P18065 325 aa7.93□□□□□ -1.14
USP6-204ENST00000572949 APOC4P55056 127 aa7.93□□□□□ -1.14
USP6-204ENST00000572949 TMEM91Q6ZNR0 172 aa7.93□□□□□ -1.14
USP6-204ENST00000572949 COL22A1Q8NFW1 1626 aaPredicted RBP7.93□□□□□ -1.14
USP6-204ENST00000572949 C22orf46C9J442 243 aa7.93□□□□□ -1.14
USP6-204ENST00000572949 H0YL77 283 aa7.93□□□□□ -1.14
USP6-204ENST00000572949 CD160O95971 181 aa7.93□□□□□ -1.14
USP6-204ENST00000572949 TRGC2P03986 189 aa7.93□□□□□ -1.14
USP6-204ENST00000572949 OR9G9P0C7N8 305 aa7.93□□□□□ -1.14
USP6-204ENST00000572949 EGR4Q05215 589 aa7.93□□□□□ -1.14
USP6-204ENST00000572949 PSG7Q13046 419 aa7.93□□□□□ -1.14
USP6-204ENST00000572949 Q6AWC8 147 aa7.93□□□□□ -1.14
USP6-204ENST00000572949 IGHV3-64A0A075B6Q5 118 aa7.93□□□□□ -1.14
USP6-204ENST00000572949 IGKV1-8A0A0C4DH67 115 aa7.93□□□□□ -1.14
USP6-204ENST00000572949 C15orf61A6NNL5 157 aa7.93□□□□□ -1.14
USP6-204ENST00000572949 ZNF708P17019 499 aa7.93□□□□□ -1.14
USP6-204ENST00000572949 ZNF672Q499Z4 452 aaPredicted RBP7.93□□□□□ -1.14
USP6-204ENST00000572949 XAF1Q6GPH4 301 aa7.93□□□□□ -1.14
USP6-204ENST00000572949 LCN12Q6JVE5 192 aa7.93□□□□□ -1.14
USP6-204ENST00000572949 RMI2Q96E14 147 aa7.93□□□□□ -1.14
USP6-204ENST00000572949 KLF4O43474 513 aa7.93□□□□□ -1.14
USP6-204ENST00000572949 FOXA3P55318 350 aaPredicted RBP7.93□□□□□ -1.14
USP6-204ENST00000572949 RNF125Q96EQ8 232 aa7.93□□□□□ -1.14
USP6-204ENST00000572949 TRAV2A0A0B4J234 112 aa7.93□□□□□ -1.14
USP6-204ENST00000572949 PVRIGQ6DKI7 326 aa7.93□□□□□ -1.14
USP6-204ENST00000572949 A0A0G2JMM0 328 aa7.92□□□□□ -1.14
USP6-204ENST00000572949 A0A1W2PPB8 328 aa7.92□□□□□ -1.14
USP6-204ENST00000572949 A0A1W2PRS3 328 aa7.92□□□□□ -1.14
USP6-204ENST00000572949 KIR3DP1A8MWS1 328 aa7.92□□□□□ -1.14
USP6-204ENST00000572949 CGAP01215 116 aa7.92□□□□□ -1.14
USP6-204ENST00000572949 ERCC8Q13216 396 aa7.92□□□□□ -1.14
USP6-204ENST00000572949 ANXA2RQ3ZCQ2 193 aa7.92□□□□□ -1.14
USP6-204ENST00000572949 CBLN2Q8IUK8 224 aa7.92□□□□□ -1.14
USP6-204ENST00000572949 Q96M66 194 aa7.92□□□□□ -1.14
USP6-204ENST00000572949 CHCHD2Q9Y6H1 151 aaPredicted RBP7.92□□□□□ -1.14
USP6-204ENST00000572949 CXCL3P19876 107 aa7.92□□□□□ -1.14
USP6-204ENST00000572949 CACNG8Q8WXS5 425 aa7.92□□□□□ -1.14
USP6-204ENST00000572949 ZNF257Q9Y2Q1 563 aa7.92□□□□□ -1.14
USP6-204ENST00000572949 XIRP1Q702N8 1843 aaKnown RBP7.92□□□□□ -1.14
USP6-204ENST00000572949 PRCDQ00LT1 54 aa7.92□□□□□ -1.14
USP6-204ENST00000572949 SRSF1Q07955 248 aaKnown RBP eCLIP7.92□□□□□ -1.14
USP6-204ENST00000572949 WFIKKN1Q96NZ8 548 aa7.92□□□□□ -1.14
USP6-204ENST00000572949 TNCP24821 2201 aa7.92□□□□□ -1.14
USP6-204ENST00000572949 P2RY4P51582 365 aa7.92□□□□□ -1.14
USP6-204ENST00000572949 C8orf82Q6P1X6 216 aaPredicted RBP7.92□□□□□ -1.14
USP6-204ENST00000572949 CACNA1HO95180 2353 aa7.92□□□□□ -1.14
USP6-204ENST00000572949 KIAA1551Q9HCM1 1747 aa7.92□□□□□ -1.14
USP6-204ENST00000572949 IQCF6A8MYZ5 107 aa7.92□□□□□ -1.14
USP6-204ENST00000572949 NKAPP1Q8N9T2 125 aa7.92□□□□□ -1.14
USP6-204ENST00000572949 MCRIP2Q9BUT9 160 aaKnown RBP7.92□□□□□ -1.14
USP6-204ENST00000572949 ADAMTSL1Q8N6G6 1762 aa7.92□□□□□ -1.14
USP6-204ENST00000572949 UCP1P25874 307 aa7.92□□□□□ -1.14
USP6-204ENST00000572949 DMRTA1Q5VZB9 504 aa7.92□□□□□ -1.14
USP6-204ENST00000572949 A0A1W2PR77 199 aa7.91□□□□□ -1.14
USP6-204ENST00000572949 PSG1P11464 419 aa7.91□□□□□ -1.14
USP6-204ENST00000572949 ZNF345Q14585 488 aa7.91□□□□□ -1.14
USP6-204ENST00000572949 PSMG3Q9BT73 122 aaPredicted RBP7.91□□□□□ -1.14
USP6-204ENST00000572949 DKK4Q9UBT3 224 aa7.91□□□□□ -1.14
USP6-204ENST00000572949 PKDREJQ9NTG1 2253 aa7.91□□□□□ -1.14
USP6-204ENST00000572949 A0A1B0GW15 77 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms