RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 IGKV1D-39P04432 117 aa14.2□□□□□ -0.14
CCDC40-206ENST00000572083 SCAND1P57086 179 aa14.2□□□□□ -0.14
CCDC40-206ENST00000572083 ERHP84090 104 aaKnown RBP14.2□□□□□ -0.14
CCDC40-206ENST00000572083 PSMG4Q5JS54 123 aa14.2□□□□□ -0.14
CCDC40-206ENST00000572083 SOHLH1Q5JUK2 328 aa14.2□□□□□ -0.14
CCDC40-206ENST00000572083 DIABLOQ9NR28 239 aa14.2□□□□□ -0.14
CCDC40-206ENST00000572083 XCL2Q9UBD3 114 aa14.2□□□□□ -0.14
CCDC40-206ENST00000572083 CRYBB3P26998 211 aa14.19□□□□□ -0.14
CCDC40-206ENST00000572083 HSPE1P61604 102 aaKnown RBP14.19□□□□□ -0.14
CCDC40-206ENST00000572083 DHRS2Q13268 280 aa14.19□□□□□ -0.14
CCDC40-206ENST00000572083 MAPKAPK5-AS1Q8N8E1 139 aa14.19□□□□□ -0.14
CCDC40-206ENST00000572083 MRGPRFQ96AM1 343 aa14.19□□□□□ -0.14
CCDC40-206ENST00000572083 RAB40CQ96S21 281 aa14.19□□□□□ -0.14
CCDC40-206ENST00000572083 RNF167Q9H6Y7 350 aa14.19□□□□□ -0.14
CCDC40-206ENST00000572083 SSR3Q9UNL2 185 aa14.19□□□□□ -0.14
CCDC40-206ENST00000572083 APOBP04114 4563 aaKnown RBP14.19□□□□□ -0.14
CCDC40-206ENST00000572083 EMP1P54849 157 aa14.18□□□□□ -0.14
CCDC40-206ENST00000572083 IZUMO4Q1ZYL8 232 aa14.18□□□□□ -0.14
CCDC40-206ENST00000572083 TBC1D26Q86UD7 250 aa14.18□□□□□ -0.14
CCDC40-206ENST00000572083 OR5H2Q8NGV7 314 aa14.18□□□□□ -0.14
CCDC40-206ENST00000572083 MRPL36Q9P0J6 103 aaKnown RBP14.18□□□□□ -0.14
CCDC40-206ENST00000572083 HELTA6NFD8 242 aa14.17□□□□□ -0.14
CCDC40-206ENST00000572083 SNCAP37840 140 aa14.17□□□□□ -0.14
CCDC40-206ENST00000572083 C1orf134Q5TEV5 83 aa14.17□□□□□ -0.14
CCDC40-206ENST00000572083 NARS2Q96I59 477 aaKnown RBP14.17□□□□□ -0.14
CCDC40-206ENST00000572083 C1QTNF4Q9BXJ3 329 aa14.17□□□□□ -0.14
CCDC40-206ENST00000572083 C16orf90A8MZG2 172 aa14.16□□□□□ -0.14
CCDC40-206ENST00000572083 ANKRD65E5RJM6 399 aa14.16□□□□□ -0.14
CCDC40-206ENST00000572083 NUTF2P61970 127 aaKnown RBP14.16□□□□□ -0.14
CCDC40-206ENST00000572083 OR6F1Q8NGZ6 308 aa14.16□□□□□ -0.14
CCDC40-206ENST00000572083 TMEM230Q96A57 120 aa14.16□□□□□ -0.14
CCDC40-206ENST00000572083 ANAPC10Q9UM13 185 aa14.16□□□□□ -0.14
CCDC40-206ENST00000572083 SPART-AS1P0CW21 52 aa14.15□□□□□ -0.14
CCDC40-206ENST00000572083 TAS2R46P59540 309 aa14.15□□□□□ -0.14
CCDC40-206ENST00000572083 KCTD21Q4G0X4 260 aa14.15□□□□□ -0.14
CCDC40-206ENST00000572083 SLC35G3Q8N808 338 aa14.15□□□□□ -0.14
CCDC40-206ENST00000572083 FNDC4Q9H6D8 234 aaPredicted RBP14.15□□□□□ -0.14
CCDC40-206ENST00000572083 FAM212BQ9NTI7 297 aaPredicted RBP14.15□□□□□ -0.14
CCDC40-206ENST00000572083 NACAE9PAV3 2078 aa14.14□□□□□ -0.15
CCDC40-206ENST00000572083 CLN5O75503 358 aa14.14□□□□□ -0.15
CCDC40-206ENST00000572083 S100GP29377 79 aa14.14□□□□□ -0.15
CCDC40-206ENST00000572083 HRH1P35367 487 aa14.14□□□□□ -0.15
CCDC40-206ENST00000572083 EIF2B2P49770 351 aaKnown RBP14.14□□□□□ -0.15
CCDC40-206ENST00000572083 TIGITQ495A1 244 aa14.14□□□□□ -0.15
CCDC40-206ENST00000572083 HERC1Q15751 4861 aa14.13□□□□□ -0.15
CCDC40-206ENST00000572083 IGHV3OR16-12A0A075B7B8 117 aa14.13□□□□□ -0.15
CCDC40-206ENST00000572083 LOC100506127A0A0U1RQW1 187 aa14.13□□□□□ -0.15
CCDC40-206ENST00000572083 CDK2AP2O75956 126 aa14.13□□□□□ -0.15
CCDC40-206ENST00000572083 RNASE2P10153 161 aaKnown RBP14.13□□□□□ -0.15
CCDC40-206ENST00000572083 HTN3P15516 51 aa14.13□□□□□ -0.15
CCDC40-206ENST00000572083 NAT1P18440 290 aa14.13□□□□□ -0.15
CCDC40-206ENST00000572083 OPRK1P41145 380 aa14.13□□□□□ -0.15
CCDC40-206ENST00000572083 GABARAPL2P60520 117 aa14.13□□□□□ -0.15
CCDC40-206ENST00000572083 MLANAQ16655 118 aa14.13□□□□□ -0.15
CCDC40-206ENST00000572083 IZUMO2Q6UXV1 221 aa14.13□□□□□ -0.15
CCDC40-206ENST00000572083 SPARTQ8N0X7 666 aa14.13□□□□□ -0.15
CCDC40-206ENST00000572083 GLMPQ8WWB7 406 aa14.13□□□□□ -0.15
CCDC40-206ENST00000572083 DNAH5Q8TE73 4624 aa14.12□□□□□ -0.15
CCDC40-206ENST00000572083 FAM90A26D6RGX4 464 aa14.12□□□□□ -0.15
CCDC40-206ENST00000572083 H3BMM0 161 aa14.12□□□□□ -0.15
CCDC40-206ENST00000572083 IGKV1-17P01599 117 aa14.12□□□□□ -0.15
CCDC40-206ENST00000572083 HLA-DMAP28067 261 aa14.12□□□□□ -0.15
CCDC40-206ENST00000572083 TNP2Q05952 138 aa14.12□□□□□ -0.15
CCDC40-206ENST00000572083 RNF212Q495C1 297 aa14.12□□□□□ -0.15
CCDC40-206ENST00000572083 C16orf54Q6UWD8 224 aa14.12□□□□□ -0.15
CCDC40-206ENST00000572083 ZNF705AQ6ZN79 300 aaPredicted RBP14.12□□□□□ -0.15
CCDC40-206ENST00000572083 OR4X1Q8NH49 305 aa14.12□□□□□ -0.15
CCDC40-206ENST00000572083 FAM210BQ96KR6 192 aa14.12□□□□□ -0.15
CCDC40-206ENST00000572083 TMEM189A5PLL7 270 aa14.11□□□□□ -0.15
CCDC40-206ENST00000572083 ZNF705FA8MVS1 300 aaPredicted RBP14.11□□□□□ -0.15
CCDC40-206ENST00000572083 CORTO00230 105 aa14.11□□□□□ -0.15
CCDC40-206ENST00000572083 SCGB2A1O75556 95 aa14.11□□□□□ -0.15
CCDC40-206ENST00000572083 ZNF705DP0CH99 300 aaPredicted RBP14.11□□□□□ -0.15
CCDC40-206ENST00000572083 ZNF705BP0CI00 300 aaPredicted RBP14.11□□□□□ -0.15
CCDC40-206ENST00000572083 HSPA13P48723 471 aa14.11□□□□□ -0.15
CCDC40-206ENST00000572083 HOXA1P49639 335 aaPredicted RBP14.11□□□□□ -0.15
CCDC40-206ENST00000572083 FXYD7P58549 80 aa14.11□□□□□ -0.15
CCDC40-206ENST00000572083 TAS2R20P59543 309 aa14.11□□□□□ -0.15
CCDC40-206ENST00000572083 SNRPD3P62318 126 aaKnown RBP14.11□□□□□ -0.15
CCDC40-206ENST00000572083 TMEM69Q5SWH9 247 aa14.11□□□□□ -0.15
CCDC40-206ENST00000572083 S100A16Q96FQ6 103 aaKnown RBP14.11□□□□□ -0.15
CCDC40-206ENST00000572083 NEU1Q99519 415 aa14.11□□□□□ -0.15
CCDC40-206ENST00000572083 U3KQE9 123 aa14.11□□□□□ -0.15
CCDC40-206ENST00000572083 A0A0B4J293 547 aa14.1□□□□□ -0.15
CCDC40-206ENST00000572083 INS-IGF2F8WCM5 200 aa14.1□□□□□ -0.15
CCDC40-206ENST00000572083 IGKV1-5P01602 117 aa14.1□□□□□ -0.15
CCDC40-206ENST00000572083 HNRNPCP07910 306 aaKnown RBP eCLIP14.1□□□□□ -0.15
CCDC40-206ENST00000572083 SUB1P53999 127 aaKnown RBP eCLIP14.1□□□□□ -0.15
CCDC40-206ENST00000572083 TSPAN5P62079 268 aa14.1□□□□□ -0.15
CCDC40-206ENST00000572083 FAM222AQ5U5X8 452 aa14.1□□□□□ -0.15
CCDC40-206ENST00000572083 LPCAT3Q6P1A2 487 aa14.1□□□□□ -0.15
CCDC40-206ENST00000572083 LYSMD2Q8IV50 215 aa14.1□□□□□ -0.15
CCDC40-206ENST00000572083 FCGR1BQ92637 280 aa14.1□□□□□ -0.15
CCDC40-206ENST00000572083 DKK2Q9UBU2 259 aa14.1□□□□□ -0.15
CCDC40-206ENST00000572083 IGKV3-20P01619 116 aa14.09□□□□□ -0.15
CCDC40-206ENST00000572083 HLA-DRB4P13762 266 aa14.09□□□□□ -0.15
CCDC40-206ENST00000572083 ETV6P41212 452 aa14.09□□□□□ -0.15
CCDC40-206ENST00000572083 AKR1C2P52895 323 aa14.09□□□□□ -0.15
CCDC40-206ENST00000572083 AP2S1P53680 142 aaPredicted RBP14.09□□□□□ -0.15
CCDC40-206ENST00000572083 UBE2NLQ5JXB2 153 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms