RNA–Protein interactions for RNA: ENST00000571947.5

TRAPPC1-204, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 306 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-204ENST00000571947 MRPL36Q9P0J6 103 aaKnown RBP4.87□□□□□ -1.63
TRAPPC1-204ENST00000571947 VAX2Q9UIW0 290 aa4.87□□□□□ -1.63
TRAPPC1-204ENST00000571947 CSPG4Q6UVK1 2322 aa4.86□□□□□ -1.63
TRAPPC1-204ENST00000571947 IGKV1D-37A0A075B6S9 117 aa4.86□□□□□ -1.63
TRAPPC1-204ENST00000571947 ZFP92A6NM28 416 aa4.86□□□□□ -1.63
TRAPPC1-204ENST00000571947 NCBP2LA6PVI3 153 aaKnown RBP4.86□□□□□ -1.63
TRAPPC1-204ENST00000571947 NPIPB5A8MRT5 1133 aa4.86□□□□□ -1.63
TRAPPC1-204ENST00000571947 I3L2K1 104 aa4.86□□□□□ -1.63
TRAPPC1-204ENST00000571947 J3QLI3 93 aa4.86□□□□□ -1.63
TRAPPC1-204ENST00000571947 EIF3GO75821 320 aaKnown RBP eCLIP4.86□□□□□ -1.63
TRAPPC1-204ENST00000571947 SNAPINO95295 136 aa4.86□□□□□ -1.63
TRAPPC1-204ENST00000571947 CXorf1O96002 111 aa4.86□□□□□ -1.63
TRAPPC1-204ENST00000571947 MT-CO2P00403 227 aa4.86□□□□□ -1.63
TRAPPC1-204ENST00000571947 HLA-DRB1P01911 266 aa4.86□□□□□ -1.63
TRAPPC1-204ENST00000571947 APELAP0DMC3 54 aa4.86□□□□□ -1.63
TRAPPC1-204ENST00000571947 IGHV4-38-2P0DP08 117 aa4.86□□□□□ -1.63
TRAPPC1-204ENST00000571947 RND2P52198 227 aa4.86□□□□□ -1.63
TRAPPC1-204ENST00000571947 SELENOTP62341 195 aa4.86□□□□□ -1.63
TRAPPC1-204ENST00000571947 CX3CL1P78423 397 aa4.86□□□□□ -1.63
TRAPPC1-204ENST00000571947 ASPHD1Q5U4P2 390 aa4.86□□□□□ -1.63
TRAPPC1-204ENST00000571947 C19orf35Q6ZS72 473 aa4.86□□□□□ -1.63
TRAPPC1-204ENST00000571947 SLC35E3Q7Z769 313 aa4.86□□□□□ -1.63
TRAPPC1-204ENST00000571947 TTC9CQ8N5M4 171 aa4.86□□□□□ -1.63
TRAPPC1-204ENST00000571947 TMEM116Q8NCL8 245 aa4.86□□□□□ -1.63
TRAPPC1-204ENST00000571947 CLRN3Q8NCR9 226 aa4.86□□□□□ -1.63
TRAPPC1-204ENST00000571947 C22orf15Q8WYQ4 148 aa4.86□□□□□ -1.63
TRAPPC1-204ENST00000571947 ARPC1AQ92747 370 aa4.86□□□□□ -1.63
TRAPPC1-204ENST00000571947 PSMG3-AS1Q96PY0 264 aa4.86□□□□□ -1.63
TRAPPC1-204ENST00000571947 RNF2Q99496 336 aa4.86□□□□□ -1.63
TRAPPC1-204ENST00000571947 TRGV9Q99603 122 aa4.86□□□□□ -1.63
TRAPPC1-204ENST00000571947 RASL11BQ9BPW5 248 aa4.86□□□□□ -1.63
TRAPPC1-204ENST00000571947 SLC25A33Q9BSK2 321 aa4.86□□□□□ -1.63
TRAPPC1-204ENST00000571947 NKX6-2Q9C056 277 aaPredicted RBP4.86□□□□□ -1.63
TRAPPC1-204ENST00000571947 WNT10AQ9GZT5 417 aa4.86□□□□□ -1.63
TRAPPC1-204ENST00000571947 TMPRSS5Q9H3S3 457 aa4.86□□□□□ -1.63
TRAPPC1-204ENST00000571947 MANBALQ9NQG1 85 aa4.86□□□□□ -1.63
TRAPPC1-204ENST00000571947 HIF1ANQ9NWT6 349 aa4.86□□□□□ -1.63
TRAPPC1-204ENST00000571947 DMRT1Q9Y5R6 373 aa4.86□□□□□ -1.63
TRAPPC1-204ENST00000571947 PTPN13Q12923 2485 aa4.86□□□□□ -1.63
TRAPPC1-204ENST00000571947 IGLV11-55A0A075B6I3 123 aa4.85□□□□□ -1.63
TRAPPC1-204ENST00000571947 IGHV3OR16-10A0A075B7F0 116 aa4.85□□□□□ -1.63
TRAPPC1-204ENST00000571947 IGHV7-81A0A0B4J1V7 117 aa4.85□□□□□ -1.63
TRAPPC1-204ENST00000571947 A0A0U1RQK1 487 aa4.85□□□□□ -1.63
TRAPPC1-204ENST00000571947 PSMB11A5LHX3 300 aa4.85□□□□□ -1.63
TRAPPC1-204ENST00000571947 RNF223E7ERA6 249 aa4.85□□□□□ -1.63
TRAPPC1-204ENST00000571947 AVPP01185 164 aa4.85□□□□□ -1.63
TRAPPC1-204ENST00000571947 IGHV3-48P01763 117 aa4.85□□□□□ -1.63
TRAPPC1-204ENST00000571947 FBP1P09467 338 aa4.85□□□□□ -1.63
TRAPPC1-204ENST00000571947 OR5G3P0C626 314 aa4.85□□□□□ -1.63
TRAPPC1-204ENST00000571947 ARL14EPLP0DKL9 152 aa4.85□□□□□ -1.63
TRAPPC1-204ENST00000571947 EGR2P11161 476 aaPredicted RBP4.85□□□□□ -1.63
TRAPPC1-204ENST00000571947 DEFA4P12838 97 aa4.85□□□□□ -1.63
TRAPPC1-204ENST00000571947 GATA2P23769 480 aaPredicted RBP4.85□□□□□ -1.63
TRAPPC1-204ENST00000571947 NPBWR1P48145 328 aa4.85□□□□□ -1.63
TRAPPC1-204ENST00000571947 NDPQ00604 133 aa4.85□□□□□ -1.63
TRAPPC1-204ENST00000571947 BTN1A1Q13410 526 aa4.85□□□□□ -1.63
TRAPPC1-204ENST00000571947 KLF17Q5JT82 389 aaPredicted RBP4.85□□□□□ -1.63
TRAPPC1-204ENST00000571947 SOHLH1Q5JUK2 328 aa4.85□□□□□ -1.63
TRAPPC1-204ENST00000571947 SPATA31B1PQ5VZV4 182 aa4.85□□□□□ -1.63
TRAPPC1-204ENST00000571947 PRSS57Q6UWY2 283 aa4.85□□□□□ -1.63
TRAPPC1-204ENST00000571947 BRD3OSQ6XYD6 125 aa4.85□□□□□ -1.63
TRAPPC1-204ENST00000571947 OR1L4Q8NGR5 311 aa4.85□□□□□ -1.63
TRAPPC1-204ENST00000571947 PIFOQ8TCI5 191 aa4.85□□□□□ -1.63
TRAPPC1-204ENST00000571947 GATAD1Q8WUU5 269 aa4.85□□□□□ -1.63
TRAPPC1-204ENST00000571947 RBM14Q96PK6 669 aaKnown RBP4.85□□□□□ -1.63
TRAPPC1-204ENST00000571947 PFDN5Q99471 154 aa4.85□□□□□ -1.63
TRAPPC1-204ENST00000571947 FAM103A1Q9BTL3 118 aaKnown RBP4.85□□□□□ -1.63
TRAPPC1-204ENST00000571947 MRPL32Q9BYC8 188 aaKnown RBP4.85□□□□□ -1.63
TRAPPC1-204ENST00000571947 TNFRSF19Q9NS68 423 aa4.85□□□□□ -1.63
TRAPPC1-204ENST00000571947 TECRQ9NZ01 308 aaKnown RBP4.85□□□□□ -1.63
TRAPPC1-204ENST00000571947 FUT9Q9Y231 359 aa4.85□□□□□ -1.63
TRAPPC1-204ENST00000571947 POLQO75417 2590 aa4.84□□□□□ -1.63
TRAPPC1-204ENST00000571947 ABCA12Q86UK0 2595 aa4.84□□□□□ -1.63
TRAPPC1-204ENST00000571947 IGHV3-21A0A0B4J1V1 117 aa4.84□□□□□ -1.63
TRAPPC1-204ENST00000571947 K7EIM0 57 aa4.84□□□□□ -1.63
TRAPPC1-204ENST00000571947 DNASE2O00115 360 aaPredicted RBP4.84□□□□□ -1.63
TRAPPC1-204ENST00000571947 PAGE4O60829 102 aa4.84□□□□□ -1.63
TRAPPC1-204ENST00000571947 IGHV4-31P0DP07 118 aa4.84□□□□□ -1.63
TRAPPC1-204ENST00000571947 GCHFRP30047 84 aa4.84□□□□□ -1.63
TRAPPC1-204ENST00000571947 BPIFB3P59826 476 aa4.84□□□□□ -1.63
TRAPPC1-204ENST00000571947 CD81P60033 236 aa4.84□□□□□ -1.63
TRAPPC1-204ENST00000571947 PLP1P60201 277 aa4.84□□□□□ -1.63
TRAPPC1-204ENST00000571947 MEF2BQ02080 365 aaPredicted RBP4.84□□□□□ -1.63
TRAPPC1-204ENST00000571947 ZNF90Q03938 601 aa4.84□□□□□ -1.63
TRAPPC1-204ENST00000571947 KLK9Q2XQG4 91 aa4.84□□□□□ -1.63
TRAPPC1-204ENST00000571947 Q5PR19 223 aa4.84□□□□□ -1.63
TRAPPC1-204ENST00000571947 FAM78BQ5VT40 261 aa4.84□□□□□ -1.63
TRAPPC1-204ENST00000571947 FAM90A2PQ658T7 463 aa4.84□□□□□ -1.63
TRAPPC1-204ENST00000571947 SPNS3Q6ZMD2 512 aa4.84□□□□□ -1.63
TRAPPC1-204ENST00000571947 MIR17HGQ75NE6 70 aa4.84□□□□□ -1.63
TRAPPC1-204ENST00000571947 KRTAP1-3Q8IUG1 177 aa4.84□□□□□ -1.63
TRAPPC1-204ENST00000571947 IQCF2Q8IXL9 164 aa4.84□□□□□ -1.63
TRAPPC1-204ENST00000571947 C5orf56Q8N8D9 126 aa4.84□□□□□ -1.63
TRAPPC1-204ENST00000571947 CYB561D1Q8N8Q1 229 aa4.84□□□□□ -1.63
TRAPPC1-204ENST00000571947 OR4X1Q8NH49 305 aa4.84□□□□□ -1.63
TRAPPC1-204ENST00000571947 SGMS2Q8NHU3 365 aa4.84□□□□□ -1.63
TRAPPC1-204ENST00000571947 FAM110DQ8TAY7 271 aaPredicted RBP4.84□□□□□ -1.63
TRAPPC1-204ENST00000571947 NANPQ8TBE9 248 aa4.84□□□□□ -1.63
TRAPPC1-204ENST00000571947 TMEM37Q8WXS4 190 aa4.84□□□□□ -1.63
TRAPPC1-204ENST00000571947 TMEM68Q96MH6 324 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms