RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 SSX1Q16384 188 aa4.35□□□□□ -1.71
HERPUD1-217ENST00000569429 Q499Y3 187 aa4.35□□□□□ -1.71
HERPUD1-217ENST00000569429 ACSM3Q53FZ2 586 aa4.35□□□□□ -1.71
HERPUD1-217ENST00000569429 GLIPR1L1Q6UWM5 242 aa4.35□□□□□ -1.71
HERPUD1-217ENST00000569429 GPR141Q7Z602 305 aa4.35□□□□□ -1.71
HERPUD1-217ENST00000569429 SPARTQ8N0X7 666 aa4.35□□□□□ -1.71
HERPUD1-217ENST00000569429 MS4A15Q8N5U1 240 aa4.35□□□□□ -1.71
HERPUD1-217ENST00000569429 SETD6Q8TBK2 473 aa4.35□□□□□ -1.71
HERPUD1-217ENST00000569429 ORAI1Q96D31 301 aa4.35□□□□□ -1.71
HERPUD1-217ENST00000569429 SMIM19Q96E16 107 aa4.35□□□□□ -1.71
HERPUD1-217ENST00000569429 GPHA2Q96T91 129 aa4.35□□□□□ -1.71
HERPUD1-217ENST00000569429 FAAP24Q9BTP7 215 aa4.35□□□□□ -1.71
HERPUD1-217ENST00000569429 DPH3P1Q9H4G8 78 aa4.35□□□□□ -1.71
HERPUD1-217ENST00000569429 CHMP1AQ9HD42 196 aaPredicted RBP4.35□□□□□ -1.71
HERPUD1-217ENST00000569429 ACOT13Q9NPJ3 140 aa4.35□□□□□ -1.71
HERPUD1-217ENST00000569429 LY96Q9Y6Y9 160 aa4.35□□□□□ -1.71
HERPUD1-217ENST00000569429 CCDC160A6NGH7 325 aa4.34□□□□□ -1.71
HERPUD1-217ENST00000569429 ZNF561-AS1K7EIQ3 104 aa4.34□□□□□ -1.71
HERPUD1-217ENST00000569429 SERPINE2P07093 398 aa4.34□□□□□ -1.71
HERPUD1-217ENST00000569429 SMIM18P0DKX4 95 aa4.34□□□□□ -1.71
HERPUD1-217ENST00000569429 PSMA1P25786 263 aaKnown RBP4.34□□□□□ -1.71
HERPUD1-217ENST00000569429 MAPK3P27361 379 aaPredicted RBP4.34□□□□□ -1.71
HERPUD1-217ENST00000569429 NKX2-1P43699 371 aaPredicted RBP4.34□□□□□ -1.71
HERPUD1-217ENST00000569429 CDKN1BP46527 198 aa4.34□□□□□ -1.71
HERPUD1-217ENST00000569429 P2RY1P47900 373 aa4.34□□□□□ -1.71
HERPUD1-217ENST00000569429 SERPINB10P48595 397 aa4.34□□□□□ -1.71
HERPUD1-217ENST00000569429 KRTAP10-8P60410 259 aa4.34□□□□□ -1.71
HERPUD1-217ENST00000569429 MLLT11Q13015 90 aaPredicted RBP4.34□□□□□ -1.71
HERPUD1-217ENST00000569429 GDF5OSQ5U4N7 250 aa4.34□□□□□ -1.71
HERPUD1-217ENST00000569429 C6orf201Q7Z4U5 140 aa4.34□□□□□ -1.71
HERPUD1-217ENST00000569429 TPRA1Q86W33 373 aa4.34□□□□□ -1.71
HERPUD1-217ENST00000569429 JAGN1Q8N5M9 183 aa4.34□□□□□ -1.71
HERPUD1-217ENST00000569429 OR10J6PQ8NGY7 276 aa4.34□□□□□ -1.71
HERPUD1-217ENST00000569429 SLC25A46Q96AG3 418 aa4.34□□□□□ -1.71
HERPUD1-217ENST00000569429 TXN2Q99757 166 aa4.34□□□□□ -1.71
HERPUD1-217ENST00000569429 LINC00467Q9BRT7 94 aa4.34□□□□□ -1.71
HERPUD1-217ENST00000569429 CDIP1Q9H305 208 aa4.34□□□□□ -1.71
HERPUD1-217ENST00000569429 BET1LQ9NYM9 111 aa4.34□□□□□ -1.71
HERPUD1-217ENST00000569429 F11RQ9Y624 299 aaKnown RBP4.34□□□□□ -1.71
HERPUD1-217ENST00000569429 ZNF705GA8MUZ8 300 aaPredicted RBP4.33□□□□□ -1.72
HERPUD1-217ENST00000569429 FAM90A26D6RGX4 464 aa4.33□□□□□ -1.72
HERPUD1-217ENST00000569429 M0QYG6 137 aa4.33□□□□□ -1.72
HERPUD1-217ENST00000569429 RAB27BO00194 218 aa4.33□□□□□ -1.72
HERPUD1-217ENST00000569429 CRTAPO75718 401 aaPredicted RBP4.33□□□□□ -1.72
HERPUD1-217ENST00000569429 ARL6IP5O75915 188 aa4.33□□□□□ -1.72
HERPUD1-217ENST00000569429 IGKV3-20P01619 116 aa4.33□□□□□ -1.72
HERPUD1-217ENST00000569429 PRM2P04554 102 aa4.33□□□□□ -1.72
HERPUD1-217ENST00000569429 SRMP19623 302 aa4.33□□□□□ -1.72
HERPUD1-217ENST00000569429 NPPCP23582 126 aa4.33□□□□□ -1.72
HERPUD1-217ENST00000569429 CRYBB3P26998 211 aa4.33□□□□□ -1.72
HERPUD1-217ENST00000569429 EIF2B2P49770 351 aaKnown RBP4.33□□□□□ -1.72
HERPUD1-217ENST00000569429 AP2S1P53680 142 aaPredicted RBP4.33□□□□□ -1.72
HERPUD1-217ENST00000569429 MFAP4P55083 255 aa4.33□□□□□ -1.72
HERPUD1-217ENST00000569429 RPS25P62851 125 aaKnown RBP4.33□□□□□ -1.72
HERPUD1-217ENST00000569429 PSG9Q00887 426 aa4.33□□□□□ -1.72
HERPUD1-217ENST00000569429 UNC119Q13432 240 aa4.33□□□□□ -1.72
HERPUD1-217ENST00000569429 INSL4Q14641 139 aa4.33□□□□□ -1.72
HERPUD1-217ENST00000569429 TRAM1Q15629 374 aa4.33□□□□□ -1.72
HERPUD1-217ENST00000569429 TBCEQ15813 527 aaPredicted RBP4.33□□□□□ -1.72
HERPUD1-217ENST00000569429 CNPY1Q3B7I2 92 aa4.33□□□□□ -1.72
HERPUD1-217ENST00000569429 HSD17B12Q53GQ0 312 aa4.33□□□□□ -1.72
HERPUD1-217ENST00000569429 THOC7Q6I9Y2 204 aaKnown RBP4.33□□□□□ -1.72
HERPUD1-217ENST00000569429 HSD17B13Q7Z5P4 300 aaPredicted RBP4.33□□□□□ -1.72
HERPUD1-217ENST00000569429 TMED4Q7Z7H5 227 aa4.33□□□□□ -1.72
HERPUD1-217ENST00000569429 ZNF485Q8NCK3 441 aa4.33□□□□□ -1.72
HERPUD1-217ENST00000569429 OR13F1Q8NGS4 319 aa4.33□□□□□ -1.72
HERPUD1-217ENST00000569429 MUL1Q969V5 352 aa4.33□□□□□ -1.72
HERPUD1-217ENST00000569429 TMEM208Q9BTX3 173 aa4.33□□□□□ -1.72
HERPUD1-217ENST00000569429 SLC35B3Q9H1N7 401 aa4.33□□□□□ -1.72
HERPUD1-217ENST00000569429 SAV1Q9H4B6 383 aaPredicted RBP4.33□□□□□ -1.72
HERPUD1-217ENST00000569429 AP5S1Q9NUS5 200 aa4.33□□□□□ -1.72
HERPUD1-217ENST00000569429 RSL24D1Q9UHA3 163 aaKnown RBP4.33□□□□□ -1.72
HERPUD1-217ENST00000569429 SSR3Q9UNL2 185 aa4.33□□□□□ -1.72
HERPUD1-217ENST00000569429 MRPS7Q9Y2R9 242 aaKnown RBP4.33□□□□□ -1.72
HERPUD1-217ENST00000569429 PRELID3BQ9Y3B1 194 aa4.33□□□□□ -1.72
HERPUD1-217ENST00000569429 TRAV8-7A0A075B6U6 113 aa4.32□□□□□ -1.72
HERPUD1-217ENST00000569429 TRAV5A0A0B4J249 113 aa4.32□□□□□ -1.72
HERPUD1-217ENST00000569429 TRBV5-5A0A0J9YX44 114 aa4.32□□□□□ -1.72
HERPUD1-217ENST00000569429 A0A0J9YXV3 536 aa4.32□□□□□ -1.72
HERPUD1-217ENST00000569429 LOC100506127A0A0U1RQW1 187 aa4.32□□□□□ -1.72
HERPUD1-217ENST00000569429 PDCD5O14737 125 aa4.32□□□□□ -1.72
HERPUD1-217ENST00000569429 CD1AP06126 327 aa4.32□□□□□ -1.72
HERPUD1-217ENST00000569429 FGF2P09038 288 aa4.32□□□□□ -1.72
HERPUD1-217ENST00000569429 OR13C7P0DN81 318 aa4.32□□□□□ -1.72
HERPUD1-217ENST00000569429 CD36P16671 472 aa4.32□□□□□ -1.72
HERPUD1-217ENST00000569429 EVI2AP22794 236 aa4.32□□□□□ -1.72
HERPUD1-217ENST00000569429 MYL9P24844 172 aa4.32□□□□□ -1.72
HERPUD1-217ENST00000569429 CALRP27797 417 aaKnown RBP4.32□□□□□ -1.72
HERPUD1-217ENST00000569429 B2MP61769 119 aa4.32□□□□□ -1.72
HERPUD1-217ENST00000569429 RPS11P62280 158 aaKnown RBP eCLIP4.32□□□□□ -1.72
HERPUD1-217ENST00000569429 FABP5Q01469 135 aa4.32□□□□□ -1.72
HERPUD1-217ENST00000569429 WT1-ASQ06250 92 aa4.32□□□□□ -1.72
HERPUD1-217ENST00000569429 ZNF79Q15937 498 aa4.32□□□□□ -1.72
HERPUD1-217ENST00000569429 TDRG1Q3Y452 100 aa4.32□□□□□ -1.72
HERPUD1-217ENST00000569429 AWAT2Q6E213 333 aa4.32□□□□□ -1.72
HERPUD1-217ENST00000569429 C22orf42Q6IC83 251 aa4.32□□□□□ -1.72
HERPUD1-217ENST00000569429 ZNF600Q6ZNG1 722 aa4.32□□□□□ -1.72
HERPUD1-217ENST00000569429 C10orf126Q8N4M7 172 aa4.32□□□□□ -1.72
HERPUD1-217ENST00000569429 HSD17B11Q8NBQ5 300 aa4.32□□□□□ -1.72
HERPUD1-217ENST00000569429 ZBTB34Q8NCN2 500 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms