RNA–Protein interactions for RNA: ENST00000569336.2

CLN6-209, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-209ENST00000569336 DTD1Q8TEA8 209 aa7.44□□□□□ -1.22
CLN6-209ENST00000569336 GINS3Q9BRX5 216 aa7.44□□□□□ -1.22
CLN6-209ENST00000569336 WDR12Q9GZL7 423 aaKnown RBP7.44□□□□□ -1.22
CLN6-209ENST00000569336 TRAV25A0A0B4J276 109 aa7.43□□□□□ -1.22
CLN6-209ENST00000569336 A6NHS1 94 aa7.43□□□□□ -1.22
CLN6-209ENST00000569336 F8W735 103 aaPredicted RBP7.43□□□□□ -1.22
CLN6-209ENST00000569336 K7EMT4 169 aa7.43□□□□□ -1.22
CLN6-209ENST00000569336 MED6O75586 246 aa7.43□□□□□ -1.22
CLN6-209ENST00000569336 NXPH3O95157 252 aa7.43□□□□□ -1.22
CLN6-209ENST00000569336 CTSGP08311 255 aa7.43□□□□□ -1.22
CLN6-209ENST00000569336 OR4E1P0C645 316 aa7.43□□□□□ -1.22
CLN6-209ENST00000569336 NHLRC4P0CG21 123 aaPredicted RBP7.43□□□□□ -1.22
CLN6-209ENST00000569336 SLC25A4P12235 298 aa7.43□□□□□ -1.22
CLN6-209ENST00000569336 BTCP35070 178 aa7.43□□□□□ -1.22
CLN6-209ENST00000569336 ADMP35318 185 aa7.43□□□□□ -1.22
CLN6-209ENST00000569336 DEFB114Q30KQ6 69 aa7.43□□□□□ -1.22
CLN6-209ENST00000569336 ANKRD55Q3KP44 614 aa7.43□□□□□ -1.22
CLN6-209ENST00000569336 C4orf46Q504U0 113 aa7.43□□□□□ -1.22
CLN6-209ENST00000569336 ETFRF1Q6IPR1 90 aa7.43□□□□□ -1.22
CLN6-209ENST00000569336 SLC16A13Q7RTY0 426 aa7.43□□□□□ -1.22
CLN6-209ENST00000569336 LYG2Q86SG7 212 aa7.43□□□□□ -1.22
CLN6-209ENST00000569336 UXS1Q8NBZ7 420 aa7.43□□□□□ -1.22
CLN6-209ENST00000569336 CACNG8Q8WXS5 425 aa7.43□□□□□ -1.22
CLN6-209ENST00000569336 CHRDL1Q9BU40 450 aa7.43□□□□□ -1.22
CLN6-209ENST00000569336 C20orf24Q9BUV8 137 aa7.43□□□□□ -1.22
CLN6-209ENST00000569336 C20orf85Q9H1P6 137 aa7.43□□□□□ -1.22
CLN6-209ENST00000569336 U3KQ87 197 aa7.43□□□□□ -1.22
CLN6-209ENST00000569336 TRAV30A0A087WSZ9 112 aa7.42□□□□□ -1.22
CLN6-209ENST00000569336 C9orf170A2RU37 121 aa7.42□□□□□ -1.22
CLN6-209ENST00000569336 YIF1AO95070 293 aa7.42□□□□□ -1.22
CLN6-209ENST00000569336 IFNA10P01566 189 aa7.42□□□□□ -1.22
CLN6-209ENST00000569336 IFNA21P01568 189 aa7.42□□□□□ -1.22
CLN6-209ENST00000569336 IGHV3-48P01763 117 aa7.42□□□□□ -1.22
CLN6-209ENST00000569336 C8orf88P0DMB2 117 aa7.42□□□□□ -1.22
CLN6-209ENST00000569336 CD81P60033 236 aa7.42□□□□□ -1.22
CLN6-209ENST00000569336 DHRS2Q13268 280 aa7.42□□□□□ -1.22
CLN6-209ENST00000569336 ZNF846Q147U1 533 aa7.42□□□□□ -1.22
CLN6-209ENST00000569336 GUCA2BQ16661 112 aa7.42□□□□□ -1.22
CLN6-209ENST00000569336 TM4SF20Q53R12 229 aa7.42□□□□□ -1.22
CLN6-209ENST00000569336 MZT2BQ6NZ67 158 aa7.42□□□□□ -1.22
CLN6-209ENST00000569336 BTNL8Q6UX41 500 aa7.42□□□□□ -1.22
CLN6-209ENST00000569336 ADAMTSL5Q6ZMM2 481 aa7.42□□□□□ -1.22
CLN6-209ENST00000569336 ZNF600Q6ZNG1 722 aa7.42□□□□□ -1.22
CLN6-209ENST00000569336 RBPMS2Q6ZRY4 209 aaKnown RBP7.42□□□□□ -1.22
CLN6-209ENST00000569336 TMEM61Q8N0U2 210 aa7.42□□□□□ -1.22
CLN6-209ENST00000569336 OR4X1Q8NH49 305 aa7.42□□□□□ -1.22
CLN6-209ENST00000569336 OR10C1Q96KK4 312 aa7.42□□□□□ -1.22
CLN6-209ENST00000569336 CIB3Q96Q77 187 aaPredicted RBP7.42□□□□□ -1.22
CLN6-209ENST00000569336 RBKSQ9H477 322 aa7.42□□□□□ -1.22
CLN6-209ENST00000569336 MLXQ9UH92 298 aa7.42□□□□□ -1.22
CLN6-209ENST00000569336 AGRNO00468 2067 aa7.41□□□□□ -1.22
CLN6-209ENST00000569336 IZUMO1RA6ND01 250 aa7.41□□□□□ -1.22
CLN6-209ENST00000569336 A8MZ25 164 aa7.41□□□□□ -1.22
CLN6-209ENST00000569336 CLN5O75503 358 aa7.41□□□□□ -1.22
CLN6-209ENST00000569336 CD5P06127 495 aa7.41□□□□□ -1.22
CLN6-209ENST00000569336 HOXB5P09067 269 aa7.41□□□□□ -1.22
CLN6-209ENST00000569336 FRMD6-AS1P0C7T7 363 aa7.41□□□□□ -1.22
CLN6-209ENST00000569336 IGHV4-30-4P0DP06 118 aa7.41□□□□□ -1.22
CLN6-209ENST00000569336 EDN2P20800 178 aa7.41□□□□□ -1.22
CLN6-209ENST00000569336 RPP30P78346 268 aaKnown RBP7.41□□□□□ -1.22
CLN6-209ENST00000569336 LAMTOR1Q6IAA8 161 aa7.41□□□□□ -1.22
CLN6-209ENST00000569336 WDR89Q96FK6 387 aaPredicted RBP7.41□□□□□ -1.22
CLN6-209ENST00000569336 SPAG8Q99932 426 aaPredicted RBP7.41□□□□□ -1.22
CLN6-209ENST00000569336 NUDT15Q9NV35 164 aa7.41□□□□□ -1.22
CLN6-209ENST00000569336 TRAV14DV4A0A0A6YYC5 116 aa7.4□□□□□ -1.22
CLN6-209ENST00000569336 WRBO00258 174 aa7.4□□□□□ -1.22
CLN6-209ENST00000569336 PLA2G10O15496 165 aa7.4□□□□□ -1.22
CLN6-209ENST00000569336 PITX3O75364 302 aa7.4□□□□□ -1.22
CLN6-209ENST00000569336 TMEM50AO95807 157 aa7.4□□□□□ -1.22
CLN6-209ENST00000569336 TCRBP04435 133 aa7.4□□□□□ -1.22
CLN6-209ENST00000569336 IFNA4P05014 189 aa7.4□□□□□ -1.22
CLN6-209ENST00000569336 ANXA7P20073 488 aaKnown RBP7.4□□□□□ -1.22
CLN6-209ENST00000569336 RAB11AP62491 216 aa7.4□□□□□ -1.22
CLN6-209ENST00000569336 GGNBP1Q5YKI7 109 aa7.4□□□□□ -1.22
CLN6-209ENST00000569336 Q8N1Y9 231 aa7.4□□□□□ -1.22
CLN6-209ENST00000569336 TMEM116Q8NCL8 245 aa7.4□□□□□ -1.22
CLN6-209ENST00000569336 OR52B4Q8NGK2 314 aa7.4□□□□□ -1.22
CLN6-209ENST00000569336 OR1S2Q8NGQ3 325 aa7.4□□□□□ -1.22
CLN6-209ENST00000569336 NARS2Q96I59 477 aaKnown RBP7.4□□□□□ -1.22
CLN6-209ENST00000569336 NEURL2Q9BR09 285 aa7.4□□□□□ -1.22
CLN6-209ENST00000569336 KRTAP17-1Q9BYP8 105 aa7.4□□□□□ -1.22
CLN6-209ENST00000569336 FNDC4Q9H6D8 234 aaPredicted RBP7.4□□□□□ -1.22
CLN6-209ENST00000569336 TMEM231Q9H6L2 316 aa7.4□□□□□ -1.22
CLN6-209ENST00000569336 TUBA4BQ9H853 241 aa7.4□□□□□ -1.22
CLN6-209ENST00000569336 FLVCR2Q9UPI3 526 aa7.4□□□□□ -1.22
CLN6-209ENST00000569336 TRAV6A0A075B6T7 132 aa7.39□□□□□ -1.23
CLN6-209ENST00000569336 IGHV3OR16-8A0A075B7F1 116 aa7.39□□□□□ -1.23
CLN6-209ENST00000569336 IGHV7-4-1A0A0J9YVY3 117 aa7.39□□□□□ -1.23
CLN6-209ENST00000569336 FAM240BA0A1B0GVZ2 78 aa7.39□□□□□ -1.23
CLN6-209ENST00000569336 OR4C46A6NHA9 309 aa7.39□□□□□ -1.23
CLN6-209ENST00000569336 TSPAN4O14817 238 aa7.39□□□□□ -1.23
CLN6-209ENST00000569336 SYNGR2O43760 224 aa7.39□□□□□ -1.23
CLN6-209ENST00000569336 SCAF4O95104 1147 aaKnown RBP7.39□□□□□ -1.23
CLN6-209ENST00000569336 OR10J1P30954 320 aa7.39□□□□□ -1.23
CLN6-209ENST00000569336 RND2P52198 227 aa7.39□□□□□ -1.23
CLN6-209ENST00000569336 ASAH1Q13510 395 aa7.39□□□□□ -1.23
CLN6-209ENST00000569336 PRSS54Q6PEW0 395 aa7.39□□□□□ -1.23
CLN6-209ENST00000569336 MITD1Q8WV92 249 aa7.39□□□□□ -1.23
CLN6-209ENST00000569336 SLC35E1Q96K37 410 aa7.39□□□□□ -1.23
CLN6-209ENST00000569336 METTL26Q96S19 204 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms