RNA–Protein interactions for RNA: ENST00000569036.2

CDH3-208, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-208ENST00000569036 RND3P61587 244 aa8.41□□□□□ -1.06
CDH3-208ENST00000569036 ZNF816Q0VGE8 651 aaPredicted RBP8.41□□□□□ -1.06
CDH3-208ENST00000569036 KISS1Q15726 138 aa8.41□□□□□ -1.06
CDH3-208ENST00000569036 Q6ZS49 121 aa8.41□□□□□ -1.06
CDH3-208ENST00000569036 FAM24BQ8N5W8 94 aa8.41□□□□□ -1.06
CDH3-208ENST00000569036 OR9G4Q8NGQ1 327 aa8.41□□□□□ -1.06
CDH3-208ENST00000569036 MAFIPQ8WZ33 124 aa8.41□□□□□ -1.06
CDH3-208ENST00000569036 IL22RA2Q969J5 263 aa8.41□□□□□ -1.06
CDH3-208ENST00000569036 TVP23CQ96ET8 276 aa8.41□□□□□ -1.06
CDH3-208ENST00000569036 Q96M66 194 aa8.41□□□□□ -1.06
CDH3-208ENST00000569036 NIPSNAP3BQ9BS92 247 aa8.41□□□□□ -1.06
CDH3-208ENST00000569036 ZNF2Q9BSG1 426 aaPredicted RBP8.41□□□□□ -1.06
CDH3-208ENST00000569036 CTDSP1Q9GZU7 261 aa8.41□□□□□ -1.06
CDH3-208ENST00000569036 GPR84Q9NQS5 396 aa8.41□□□□□ -1.06
CDH3-208ENST00000569036 HMCN2Q8NDA2 5059 aa8.4□□□□□ -1.06
CDH3-208ENST00000569036 A0A1W2PPE3 182 aa8.4□□□□□ -1.06
CDH3-208ENST00000569036 FAM90A7PA6NKC0 464 aa8.4□□□□□ -1.06
CDH3-208ENST00000569036 FAM90A23PA8MXZ1 464 aa8.4□□□□□ -1.06
CDH3-208ENST00000569036 C16orf90A8MZG2 172 aa8.4□□□□□ -1.06
CDH3-208ENST00000569036 AGPAT2O15120 278 aa8.4□□□□□ -1.06
CDH3-208ENST00000569036 DFFBO76075 338 aa8.4□□□□□ -1.06
CDH3-208ENST00000569036 MOSP00540 346 aa8.4□□□□□ -1.06
CDH3-208ENST00000569036 NRASP01111 189 aa8.4□□□□□ -1.06
CDH3-208ENST00000569036 UCP1P25874 307 aa8.4□□□□□ -1.06
CDH3-208ENST00000569036 REG1BP48304 166 aa8.4□□□□□ -1.06
CDH3-208ENST00000569036 TCTAP57738 103 aa8.4□□□□□ -1.06
CDH3-208ENST00000569036 IL24Q13007 206 aa8.4□□□□□ -1.06
CDH3-208ENST00000569036 C17orf58Q2M2W7 97 aa8.4□□□□□ -1.06
CDH3-208ENST00000569036 ASCL4Q6XD76 172 aa8.4□□□□□ -1.06
CDH3-208ENST00000569036 MRPL52Q86TS9 123 aaKnown RBP8.4□□□□□ -1.06
CDH3-208ENST00000569036 TMEM217Q8N7C4 229 aa8.4□□□□□ -1.06
CDH3-208ENST00000569036 OR4D5Q8NGN0 318 aa8.4□□□□□ -1.06
CDH3-208ENST00000569036 RNASEH2CQ8TDP1 164 aaKnown RBP8.4□□□□□ -1.06
CDH3-208ENST00000569036 CD300LFQ8TDQ1 290 aa8.4□□□□□ -1.06
CDH3-208ENST00000569036 RAB24Q969Q5 203 aa8.4□□□□□ -1.06
CDH3-208ENST00000569036 BTF3L4Q96K17 158 aa8.4□□□□□ -1.06
CDH3-208ENST00000569036 GGTLC1Q9BX51 225 aa8.4□□□□□ -1.06
CDH3-208ENST00000569036 PKIBQ9C010 78 aa8.4□□□□□ -1.06
CDH3-208ENST00000569036 MTCH1Q9NZJ7 389 aa8.4□□□□□ -1.06
CDH3-208ENST00000569036 PSG11Q9UQ72 335 aa8.4□□□□□ -1.06
CDH3-208ENST00000569036 LSM5Q9Y4Y9 91 aaKnown RBP8.4□□□□□ -1.06
CDH3-208ENST00000569036 TRBV24-1A0A075B6N3 115 aa8.39□□□□□ -1.07
CDH3-208ENST00000569036 ST8SIA5O15466 376 aa8.39□□□□□ -1.07
CDH3-208ENST00000569036 CSN3P07498 182 aa8.39□□□□□ -1.07
CDH3-208ENST00000569036 SLC25A6P12236 298 aa8.39□□□□□ -1.07
CDH3-208ENST00000569036 BMI1P35226 326 aa8.39□□□□□ -1.07
CDH3-208ENST00000569036 RPS10P46783 165 aaKnown RBP8.39□□□□□ -1.07
CDH3-208ENST00000569036 NPBWR2P48146 333 aa8.39□□□□□ -1.07
CDH3-208ENST00000569036 GNG10P50151 68 aa8.39□□□□□ -1.07
CDH3-208ENST00000569036 UBE2KP61086 200 aa8.39□□□□□ -1.07
CDH3-208ENST00000569036 UBE2V2Q15819 145 aa8.39□□□□□ -1.07
CDH3-208ENST00000569036 C19orf54Q5BKX5 351 aa8.39□□□□□ -1.07
CDH3-208ENST00000569036 COMMD2Q86X83 199 aa8.39□□□□□ -1.07
CDH3-208ENST00000569036 RTN4IP1Q8WWV3 396 aaPredicted RBP8.39□□□□□ -1.07
CDH3-208ENST00000569036 MOB3AQ96BX8 217 aa8.39□□□□□ -1.07
CDH3-208ENST00000569036 C2orf88Q9BSF0 95 aa8.39□□□□□ -1.07
CDH3-208ENST00000569036 METTL9Q9H1A3 318 aa8.39□□□□□ -1.07
CDH3-208ENST00000569036 C11orf1Q9H5F2 150 aa8.39□□□□□ -1.07
CDH3-208ENST00000569036 PPP1R14DQ9NXH3 145 aa8.39□□□□□ -1.07
CDH3-208ENST00000569036 DOK5Q9P104 306 aa8.39□□□□□ -1.07
CDH3-208ENST00000569036 APLNQ9ULZ1 77 aa8.39□□□□□ -1.07
CDH3-208ENST00000569036 PIGLQ9Y2B2 252 aa8.39□□□□□ -1.07
CDH3-208ENST00000569036 A0A1W2PN81 502 aa8.38□□□□□ -1.07
CDH3-208ENST00000569036 ODAMA1E959 279 aa8.38□□□□□ -1.07
CDH3-208ENST00000569036 H3BQ15 152 aa8.38□□□□□ -1.07
CDH3-208ENST00000569036 SRP19P09132 144 aaKnown RBP8.38□□□□□ -1.07
CDH3-208ENST00000569036 CHRNA7P36544 502 aa8.38□□□□□ -1.07
CDH3-208ENST00000569036 GPX4P36969 197 aaPredicted RBP8.38□□□□□ -1.07
CDH3-208ENST00000569036 PIGPP57054 158 aa8.38□□□□□ -1.07
CDH3-208ENST00000569036 DLK1P80370 383 aa8.38□□□□□ -1.07
CDH3-208ENST00000569036 AESQ08117 197 aa8.38□□□□□ -1.07
CDH3-208ENST00000569036 KLF5Q13887 457 aaPredicted RBP8.38□□□□□ -1.07
CDH3-208ENST00000569036 TMEM177Q53S58 311 aa8.38□□□□□ -1.07
CDH3-208ENST00000569036 PYY3Q5JQD4 70 aa8.38□□□□□ -1.07
CDH3-208ENST00000569036 COA6Q5JTJ3 125 aaKnown RBP8.38□□□□□ -1.07
CDH3-208ENST00000569036 OR2C3Q8N628 320 aa8.38□□□□□ -1.07
CDH3-208ENST00000569036 OR2K2Q8NGT1 345 aa8.38□□□□□ -1.07
CDH3-208ENST00000569036 OR10X1Q8NGY0 326 aa8.38□□□□□ -1.07
CDH3-208ENST00000569036 FAM213BQ8TBF2 198 aa8.38□□□□□ -1.07
CDH3-208ENST00000569036 SLAMF9Q96A28 289 aa8.38□□□□□ -1.07
CDH3-208ENST00000569036 TMEM56Q96MV1 263 aa8.38□□□□□ -1.07
CDH3-208ENST00000569036 PARD6GQ9BYG4 376 aaPredicted RBP8.38□□□□□ -1.07
CDH3-208ENST00000569036 BANF2Q9H503 90 aa8.38□□□□□ -1.07
CDH3-208ENST00000569036 LYRM2Q9NU23 88 aaPredicted RBP8.38□□□□□ -1.07
CDH3-208ENST00000569036 PLEKHJ1Q9NW61 149 aa8.38□□□□□ -1.07
CDH3-208ENST00000569036 TP53TG1Q9Y2A0 90 aa8.38□□□□□ -1.07
CDH3-208ENST00000569036 TMEM56-RWDD3S4R434 201 aa8.38□□□□□ -1.07
CDH3-208ENST00000569036 IGKV1-9A0A0C4DH69 117 aa8.37□□□□□ -1.07
CDH3-208ENST00000569036 ZNF785A8K8V0 405 aa8.37□□□□□ -1.07
CDH3-208ENST00000569036 SIRPB1O00241 398 aa8.37□□□□□ -1.07
CDH3-208ENST00000569036 SPRY2O43597 315 aa8.37□□□□□ -1.07
CDH3-208ENST00000569036 SCAF4O95104 1147 aaKnown RBP8.37□□□□□ -1.07
CDH3-208ENST00000569036 IFNA1P01562 189 aa8.37□□□□□ -1.07
CDH3-208ENST00000569036 OR5AC1P0C628 307 aa8.37□□□□□ -1.07
CDH3-208ENST00000569036 INAFM2P0DMQ5 153 aa8.37□□□□□ -1.07
CDH3-208ENST00000569036 FGF7P21781 194 aa8.37□□□□□ -1.07
CDH3-208ENST00000569036 CD1BP29016 333 aa8.37□□□□□ -1.07
CDH3-208ENST00000569036 SYNJ2BPP57105 145 aa8.37□□□□□ -1.07
CDH3-208ENST00000569036 TAS2R60P59551 318 aa8.37□□□□□ -1.07
CDH3-208ENST00000569036 OR2B8PP59922 312 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms