RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 SLC35G3Q8N808 338 aa11.27□□□□□ -0.61
NME3-211ENST00000568561 CLEC5AQ9NY25 188 aa11.27□□□□□ -0.61
NME3-211ENST00000568561 COMMD3Q9UBI1 195 aa11.27□□□□□ -0.61
NME3-211ENST00000568561 PKHD1P08F94 4074 aa11.27□□□□□ -0.61
NME3-211ENST00000568561 GABARAPO95166 117 aa11.26□□□□□ -0.61
NME3-211ENST00000568561 TMEM50AO95807 157 aa11.26□□□□□ -0.61
NME3-211ENST00000568561 CD5P06127 495 aa11.26□□□□□ -0.61
NME3-211ENST00000568561 ZNF688P0C7X2 276 aa11.26□□□□□ -0.61
NME3-211ENST00000568561 GPR107Q5VW38 600 aa11.26□□□□□ -0.61
NME3-211ENST00000568561 TRPT1Q86TN4 253 aaKnown RBP11.26□□□□□ -0.61
NME3-211ENST00000568561 BCL7BQ9BQE9 202 aa11.26□□□□□ -0.61
NME3-211ENST00000568561 TRAV2A0A0B4J234 112 aa11.25□□□□□ -0.61
NME3-211ENST00000568561 A0A0B4J293 547 aa11.25□□□□□ -0.61
NME3-211ENST00000568561 K7EQG2 157 aa11.25□□□□□ -0.61
NME3-211ENST00000568561 IFNA17P01571 189 aa11.25□□□□□ -0.61
NME3-211ENST00000568561 RNASE2P10153 161 aaKnown RBP11.25□□□□□ -0.61
NME3-211ENST00000568561 PGAM2P15259 253 aa11.25□□□□□ -0.61
NME3-211ENST00000568561 RCVRNP35243 200 aa11.25□□□□□ -0.61
NME3-211ENST00000568561 ETV6P41212 452 aa11.25□□□□□ -0.61
NME3-211ENST00000568561 P2RY1P47900 373 aa11.25□□□□□ -0.61
NME3-211ENST00000568561 AKR1C2P52895 323 aa11.25□□□□□ -0.61
NME3-211ENST00000568561 TMBIM6P55061 237 aa11.25□□□□□ -0.61
NME3-211ENST00000568561 UCP3P55916 312 aa11.25□□□□□ -0.61
NME3-211ENST00000568561 MLANAQ16655 118 aa11.25□□□□□ -0.61
NME3-211ENST00000568561 CLVS1Q8IUQ0 354 aaPredicted RBP11.25□□□□□ -0.61
NME3-211ENST00000568561 TP53RKQ96S44 253 aa11.25□□□□□ -0.61
NME3-211ENST00000568561 NAA50Q9GZZ1 169 aaKnown RBP11.25□□□□□ -0.61
NME3-211ENST00000568561 FNDC4Q9H6D8 234 aaPredicted RBP11.25□□□□□ -0.61
NME3-211ENST00000568561 TMEM231Q9H6L2 316 aa11.25□□□□□ -0.61
NME3-211ENST00000568561 X6R8D5 127 aa11.25□□□□□ -0.61
NME3-211ENST00000568561 DYNC1H1Q14204 4646 aaKnown RBP11.24□□□□□ -0.61
NME3-211ENST00000568561 DNAH11Q96DT5 4516 aa11.24□□□□□ -0.61
NME3-211ENST00000568561 ELOA3CA0A087WX78 387 aaPredicted RBP11.24□□□□□ -0.61
NME3-211ENST00000568561 C11orf94C9JXX5 98 aa11.24□□□□□ -0.61
NME3-211ENST00000568561 ZNF701M0R085 212 aaPredicted RBP11.24□□□□□ -0.61
NME3-211ENST00000568561 P0C879 139 aa11.24□□□□□ -0.61
NME3-211ENST00000568561 NPPCP23582 126 aa11.24□□□□□ -0.61
NME3-211ENST00000568561 HOXA1P49639 335 aaPredicted RBP11.24□□□□□ -0.61
NME3-211ENST00000568561 TCTAP57738 103 aa11.24□□□□□ -0.61
NME3-211ENST00000568561 CTF1Q16619 201 aa11.24□□□□□ -0.61
NME3-211ENST00000568561 TIGITQ495A1 244 aa11.24□□□□□ -0.61
NME3-211ENST00000568561 ACTL10Q5JWF8 245 aa11.24□□□□□ -0.61
NME3-211ENST00000568561 ZNF767PQ75MW2 155 aa11.24□□□□□ -0.61
NME3-211ENST00000568561 RAB2BQ8WUD1 216 aa11.24□□□□□ -0.61
NME3-211ENST00000568561 METTL26Q96S19 204 aa11.24□□□□□ -0.61
NME3-211ENST00000568561 HRH4Q9H3N8 390 aa11.24□□□□□ -0.61
NME3-211ENST00000568561 SCPEP1Q9HB40 452 aa11.24□□□□□ -0.61
NME3-211ENST00000568561 IGHV4-4A0A075B6R2 117 aa11.23□□□□□ -0.61
NME3-211ENST00000568561 A0A0G2JRQ6 117 aa11.23□□□□□ -0.61
NME3-211ENST00000568561 CLN5O75503 358 aa11.23□□□□□ -0.61
NME3-211ENST00000568561 MIFP14174 115 aa11.23□□□□□ -0.61
NME3-211ENST00000568561 ELK1P19419 428 aa11.23□□□□□ -0.61
NME3-211ENST00000568561 OPRK1P41145 380 aa11.23□□□□□ -0.61
NME3-211ENST00000568561 PIGPP57054 158 aa11.23□□□□□ -0.61
NME3-211ENST00000568561 NCS1P62166 190 aa11.23□□□□□ -0.61
NME3-211ENST00000568561 CELA1Q9UNI1 258 aa11.23□□□□□ -0.61
NME3-211ENST00000568561 TRAV10A0A0B4J240 114 aa11.22□□□□□ -0.61
NME3-211ENST00000568561 ZNF705EA8MWA4 302 aaPredicted RBP11.22□□□□□ -0.61
NME3-211ENST00000568561 HPGDSO60760 199 aa11.22□□□□□ -0.61
NME3-211ENST00000568561 APOA1P02647 267 aa11.22□□□□□ -0.61
NME3-211ENST00000568561 SPP1P10451 314 aa11.22□□□□□ -0.61
NME3-211ENST00000568561 CRYBB3P26998 211 aa11.22□□□□□ -0.61
NME3-211ENST00000568561 RND3P61587 244 aa11.22□□□□□ -0.61
NME3-211ENST00000568561 SP6Q3SY56 376 aa11.22□□□□□ -0.61
NME3-211ENST00000568561 PVRIGQ6DKI7 326 aa11.22□□□□□ -0.61
NME3-211ENST00000568561 DCANP1Q8TF63 244 aa11.22□□□□□ -0.61
NME3-211ENST00000568561 TMEM230Q96A57 120 aa11.22□□□□□ -0.61
NME3-211ENST00000568561 GRAMD2BQ96HH9 432 aa11.22□□□□□ -0.61
NME3-211ENST00000568561 PDCD10Q9BUL8 212 aa11.22□□□□□ -0.61
NME3-211ENST00000568561 SCRT1Q9BWW7 348 aa11.22□□□□□ -0.61
NME3-211ENST00000568561 RSL24D1Q9UHA3 163 aaKnown RBP11.22□□□□□ -0.61
NME3-211ENST00000568561 A0A1W2PS18 150 aa11.21□□□□□ -0.61
NME3-211ENST00000568561 INS-IGF2F8WCM5 200 aa11.21□□□□□ -0.61
NME3-211ENST00000568561 CORTO00230 105 aa11.21□□□□□ -0.61
NME3-211ENST00000568561 IGKV1-17P01599 117 aa11.21□□□□□ -0.61
NME3-211ENST00000568561 SUB1P53999 127 aaKnown RBP eCLIP11.21□□□□□ -0.61
NME3-211ENST00000568561 DHRS2Q13268 280 aa11.21□□□□□ -0.61
NME3-211ENST00000568561 TRIM16LQ309B1 348 aa11.21□□□□□ -0.61
NME3-211ENST00000568561 PSMG4Q5JS54 123 aa11.21□□□□□ -0.61
NME3-211ENST00000568561 MORN3Q6PF18 240 aaPredicted RBP11.21□□□□□ -0.61
NME3-211ENST00000568561 LHFPL1Q86WI0 220 aa11.21□□□□□ -0.61
NME3-211ENST00000568561 OR4X1Q8NH49 305 aa11.21□□□□□ -0.61
NME3-211ENST00000568561 ENY2Q9NPA8 101 aa11.21□□□□□ -0.61
NME3-211ENST00000568561 TBC1D24Q9ULP9 559 aa11.21□□□□□ -0.61
NME3-211ENST00000568561 PKD1P98161 4303 aa11.21□□□□□ -0.62
NME3-211ENST00000568561 ABCA13Q86UQ4 5058 aa11.21□□□□□ -0.62
NME3-211ENST00000568561 C3orf85A0A1B0GTC6 90 aa11.2□□□□□ -0.62
NME3-211ENST00000568561 H3BMQ9 156 aa11.2□□□□□ -0.62
NME3-211ENST00000568561 CD3DP04234 171 aa11.2□□□□□ -0.62
NME3-211ENST00000568561 TMEM41BQ5BJD5 291 aa11.2□□□□□ -0.62
NME3-211ENST00000568561 RNASE10Q5GAN6 216 aaKnown RBP11.2□□□□□ -0.62
NME3-211ENST00000568561 CSNK1G2-AS1Q8NCQ2 148 aa11.2□□□□□ -0.62
NME3-211ENST00000568561 RNASE11Q8TAA1 199 aaKnown RBP11.2□□□□□ -0.62
NME3-211ENST00000568561 KLK11Q9UBX7 282 aa11.2□□□□□ -0.62
NME3-211ENST00000568561 CCDC160A6NGH7 325 aa11.19□□□□□ -0.62
NME3-211ENST00000568561 NOL3O60936 208 aaKnown RBP11.19□□□□□ -0.62
NME3-211ENST00000568561 VBP1P61758 197 aa11.19□□□□□ -0.62
NME3-211ENST00000568561 C12orf74Q32Q52 190 aa11.19□□□□□ -0.62
NME3-211ENST00000568561 Q6ZRM9 215 aa11.19□□□□□ -0.62
NME3-211ENST00000568561 OR4D10Q8NGI6 311 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms