RNA–Protein interactions for RNA: ENST00000568515.1

DENND4A-208, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 2,655 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-208ENST00000568515 NUDT10Q8NFP7 164 aa17.5■□□□□ 0.39
DENND4A-208ENST00000568515 NUDT11Q96G61 164 aa17.5■□□□□ 0.39
DENND4A-208ENST00000568515 MUC3AQ02505 3323 aa17.49■□□□□ 0.39
DENND4A-208ENST00000568515 COL6A3P12111 3177 aa17.49■□□□□ 0.39
DENND4A-208ENST00000568515 HSBP1O75506 76 aa17.49■□□□□ 0.39
DENND4A-208ENST00000568515 PYYP10082 97 aa17.49■□□□□ 0.39
DENND4A-208ENST00000568515 TSPOP30536 169 aa17.49■□□□□ 0.39
DENND4A-208ENST00000568515 CCL11P51671 97 aa17.49■□□□□ 0.39
DENND4A-208ENST00000568515 DEFB108BQ8NET1 73 aa17.49■□□□□ 0.39
DENND4A-208ENST00000568515 SNRNP40Q96DI7 357 aaKnown RBP17.49■□□□□ 0.39
DENND4A-208ENST00000568515 M0R1B8 84 aa17.49■□□□□ 0.39
DENND4A-208ENST00000568515 DLL1O00548 723 aa17.49■□□□□ 0.39
DENND4A-208ENST00000568515 KLF5Q13887 457 aaPredicted RBP17.49■□□□□ 0.39
DENND4A-208ENST00000568515 ZNF329Q86UD4 541 aa17.49■□□□□ 0.39
DENND4A-208ENST00000568515 RND1Q92730 232 aa17.49■□□□□ 0.39
DENND4A-208ENST00000568515 GAFA1Q96PS6 74 aa17.49■□□□□ 0.39
DENND4A-208ENST00000568515 LINC00574Q9H8X3 128 aa17.49■□□□□ 0.39
DENND4A-208ENST00000568515 RNF7Q9UBF6 113 aa17.49■□□□□ 0.39
DENND4A-208ENST00000568515 RPUSD1Q9UJJ7 312 aaKnown RBP17.49■□□□□ 0.39
DENND4A-208ENST00000568515 PEX7O00628 323 aa17.48■□□□□ 0.39
DENND4A-208ENST00000568515 PAXXQ9BUH6 204 aa17.48■□□□□ 0.39
DENND4A-208ENST00000568515 DKK4Q9UBT3 224 aa17.48■□□□□ 0.39
DENND4A-208ENST00000568515 MRPS16Q9Y3D3 137 aaKnown RBP17.48■□□□□ 0.39
DENND4A-208ENST00000568515 FAM181BA6NEQ2 426 aa17.48■□□□□ 0.39
DENND4A-208ENST00000568515 FDCSPQ8NFU4 85 aa17.48■□□□□ 0.39
DENND4A-208ENST00000568515 SAP30LQ9HAJ7 183 aa17.48■□□□□ 0.39
DENND4A-208ENST00000568515 NDUFA4L2Q9NRX3 87 aa17.48■□□□□ 0.39
DENND4A-208ENST00000568515 COX7A2P2O60397 106 aa17.47■□□□□ 0.39
DENND4A-208ENST00000568515 GLRXP35754 106 aa17.47■□□□□ 0.39
DENND4A-208ENST00000568515 SSBP2P81877 361 aaPredicted RBP17.47■□□□□ 0.39
DENND4A-208ENST00000568515 ERHP84090 104 aaKnown RBP17.47■□□□□ 0.39
DENND4A-208ENST00000568515 EBLN2Q6P2I7 272 aa17.47■□□□□ 0.39
DENND4A-208ENST00000568515 ORAOV1Q8WV07 137 aa17.47■□□□□ 0.39
DENND4A-208ENST00000568515 CCL13Q99616 98 aa17.47■□□□□ 0.39
DENND4A-208ENST00000568515 M0R2Z0 102 aa17.47■□□□□ 0.39
DENND4A-208ENST00000568515 CDX4O14627 284 aaPredicted RBP17.47■□□□□ 0.39
DENND4A-208ENST00000568515 GATA4P43694 442 aa17.47■□□□□ 0.39
DENND4A-208ENST00000568515 ALKBH7Q9BT30 221 aaPredicted RBP17.47■□□□□ 0.39
DENND4A-208ENST00000568515 TNFRSF19Q9NS68 423 aa17.47■□□□□ 0.39
DENND4A-208ENST00000568515 TNRC18O15417 2968 aaPredicted RBP17.47■□□□□ 0.39
DENND4A-208ENST00000568515 RPL8P62917 257 aaKnown RBP17.46■□□□□ 0.39
DENND4A-208ENST00000568515 C10orf113Q5VZT2 155 aa17.46■□□□□ 0.39
DENND4A-208ENST00000568515 FAM216BQ8N7L0 139 aa17.46■□□□□ 0.39
DENND4A-208ENST00000568515 TRAV9-2A0A087WT02 112 aa17.46■□□□□ 0.39
DENND4A-208ENST00000568515 C20orf202A1L168 122 aa17.46■□□□□ 0.39
DENND4A-208ENST00000568515 GPR6P46095 362 aaPredicted RBP17.46■□□□□ 0.39
DENND4A-208ENST00000568515 HINT1P49773 126 aaPredicted RBP17.46■□□□□ 0.39
DENND4A-208ENST00000568515 OR8B3Q8NGG8 313 aa17.46■□□□□ 0.39
DENND4A-208ENST00000568515 OR8B2Q96RD0 313 aa17.46■□□□□ 0.39
DENND4A-208ENST00000568515 TM4SF5O14894 197 aa17.45■□□□□ 0.38
DENND4A-208ENST00000568515 OR2J3O76001 311 aa17.45■□□□□ 0.38
DENND4A-208ENST00000568515 PRR27Q6MZM9 219 aa17.45■□□□□ 0.38
DENND4A-208ENST00000568515 PATE2Q6UY27 113 aa17.45■□□□□ 0.38
DENND4A-208ENST00000568515 OSR1Q8TAX0 266 aaPredicted RBP17.45■□□□□ 0.38
DENND4A-208ENST00000568515 CHRDL1Q9BU40 450 aa17.45■□□□□ 0.38
DENND4A-208ENST00000568515 NKX2-8O15522 239 aa17.45■□□□□ 0.38
DENND4A-208ENST00000568515 TMEM30BQ3MIR4 351 aa17.45■□□□□ 0.38
DENND4A-208ENST00000568515 Q56UQ5 140 aa17.45■□□□□ 0.38
DENND4A-208ENST00000568515 RNASEKQ6P5S7 137 aaKnown RBP17.45■□□□□ 0.38
DENND4A-208ENST00000568515 OR1L4Q8NGR5 311 aa17.45■□□□□ 0.38
DENND4A-208ENST00000568515 HARBI1Q96MB7 349 aa17.45■□□□□ 0.38
DENND4A-208ENST00000568515 SSBP4Q9BWG4 385 aaPredicted RBP17.45■□□□□ 0.38
DENND4A-208ENST00000568515 RAI1Q7Z5J4 1906 aaPredicted RBP17.45■□□□□ 0.38
DENND4A-208ENST00000568515 IGHV2-26A0A0B4J1V2 119 aa17.44■□□□□ 0.38
DENND4A-208ENST00000568515 HIGD1CA8MV81 97 aa17.44■□□□□ 0.38
DENND4A-208ENST00000568515 MRPL20Q9BYC9 149 aaKnown RBP17.44■□□□□ 0.38
DENND4A-208ENST00000568515 ICE1Q9Y2F5 2266 aa17.44■□□□□ 0.38
DENND4A-208ENST00000568515 NCOR1O75376 2440 aa17.44■□□□□ 0.38
DENND4A-208ENST00000568515 IGLV3-9A0A075B6K5 115 aa17.44■□□□□ 0.38
DENND4A-208ENST00000568515 E7EUB6 86 aa17.44■□□□□ 0.38
DENND4A-208ENST00000568515 CAMPP49913 170 aa17.44■□□□□ 0.38
DENND4A-208ENST00000568515 UBE2G1P62253 170 aa17.44■□□□□ 0.38
DENND4A-208ENST00000568515 ZNF788Q6ZQV5 615 aa17.44■□□□□ 0.38
DENND4A-208ENST00000568515 HIST1H1EP10412 219 aaKnown RBP17.44■□□□□ 0.38
DENND4A-208ENST00000568515 ZNF833PQ6ZTB9 187 aa17.44■□□□□ 0.38
DENND4A-208ENST00000568515 NPIPB3Q92617 1050 aa17.44■□□□□ 0.38
DENND4A-208ENST00000568515 FXYD5Q96DB9 178 aa17.44■□□□□ 0.38
DENND4A-208ENST00000568515 ZNF430Q9H8G1 570 aaPredicted RBP17.44■□□□□ 0.38
DENND4A-208ENST00000568515 C2orf70A6NJV1 201 aa17.43■□□□□ 0.38
DENND4A-208ENST00000568515 CORTO00230 105 aa17.43■□□□□ 0.38
DENND4A-208ENST00000568515 TNFAIP6P98066 277 aaPredicted RBP17.43■□□□□ 0.38
DENND4A-208ENST00000568515 FNDC4Q9H6D8 234 aaPredicted RBP17.43■□□□□ 0.38
DENND4A-208ENST00000568515 C7orf69Q9H7B7 122 aa17.43■□□□□ 0.38
DENND4A-208ENST00000568515 H0YJW9 148 aa17.43■□□□□ 0.38
DENND4A-208ENST00000568515 APOA2P02652 100 aa17.43■□□□□ 0.38
DENND4A-208ENST00000568515 PTTG1IPP53801 180 aa17.43■□□□□ 0.38
DENND4A-208ENST00000568515 TRAV17A0A0B4J275 112 aa17.42■□□□□ 0.38
DENND4A-208ENST00000568515 VWC2LB2RUY7 222 aa17.42■□□□□ 0.38
DENND4A-208ENST00000568515 INS-IGF2F8WCM5 200 aa17.42■□□□□ 0.38
DENND4A-208ENST00000568515 CCL25O15444 150 aa17.42■□□□□ 0.38
DENND4A-208ENST00000568515 FSTL3O95633 263 aa17.42■□□□□ 0.38
DENND4A-208ENST00000568515 IGLL1P15814 213 aa17.42■□□□□ 0.38
DENND4A-208ENST00000568515 BPIFB3P59826 476 aa17.42■□□□□ 0.38
DENND4A-208ENST00000568515 GNG5P63218 68 aa17.42■□□□□ 0.38
DENND4A-208ENST00000568515 SEM1Q6ZVN7 128 aa17.42■□□□□ 0.38
DENND4A-208ENST00000568515 TCRBV4S1A1TA0A5B7 111 aa17.42■□□□□ 0.38
DENND4A-208ENST00000568515 TIMM23BQ5SRD1 257 aa17.42■□□□□ 0.38
DENND4A-208ENST00000568515 UNQ5815/PRO19632Q6UWF5 114 aa17.42■□□□□ 0.38
DENND4A-208ENST00000568515 ZNF841Q6ZN19 808 aa17.42■□□□□ 0.38
DENND4A-208ENST00000568515 ATP5L2Q7Z4Y8 100 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms