RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 FASNP49327 2511 aaKnown RBP5.62□□□□□ -1.51
SMG1-215ENST00000568239 SH2D7A6NKC9 451 aaPredicted RBP5.62□□□□□ -1.51
SMG1-215ENST00000568239 SOX15O60248 233 aa5.62□□□□□ -1.51
SMG1-215ENST00000568239 TGFAP01135 160 aa5.62□□□□□ -1.51
SMG1-215ENST00000568239 GPX4P36969 197 aaPredicted RBP5.62□□□□□ -1.51
SMG1-215ENST00000568239 MFAP2P55001 183 aa5.62□□□□□ -1.51
SMG1-215ENST00000568239 KLF17Q5JT82 389 aaPredicted RBP5.62□□□□□ -1.51
SMG1-215ENST00000568239 TMEM219Q86XT9 240 aa5.62□□□□□ -1.51
SMG1-215ENST00000568239 OR1P1Q8NH06 330 aa5.62□□□□□ -1.51
SMG1-215ENST00000568239 C22orf15Q8WYQ4 148 aa5.62□□□□□ -1.51
SMG1-215ENST00000568239 RASL11BQ9BPW5 248 aa5.62□□□□□ -1.51
SMG1-215ENST00000568239 SCRT1Q9BWW7 348 aa5.62□□□□□ -1.51
SMG1-215ENST00000568239 C1RLQ9NZP8 487 aa5.62□□□□□ -1.51
SMG1-215ENST00000568239 DOK5Q9P104 306 aa5.62□□□□□ -1.51
SMG1-215ENST00000568239 F11RQ9Y624 299 aaKnown RBP5.62□□□□□ -1.51
SMG1-215ENST00000568239 SOX21Q9Y651 276 aaPredicted RBP5.62□□□□□ -1.51
SMG1-215ENST00000568239 TRAV1-1A0A0B4J248 108 aa5.61□□□□□ -1.51
SMG1-215ENST00000568239 A0A0U1RQK1 487 aa5.61□□□□□ -1.51
SMG1-215ENST00000568239 MT-CO2P00403 227 aa5.61□□□□□ -1.51
SMG1-215ENST00000568239 RPL29P47914 159 aaKnown RBP5.61□□□□□ -1.51
SMG1-215ENST00000568239 DEFB113Q30KQ7 82 aa5.61□□□□□ -1.51
SMG1-215ENST00000568239 OXLD1Q5BKU9 147 aa5.61□□□□□ -1.51
SMG1-215ENST00000568239 SOHLH1Q5JUK2 328 aa5.61□□□□□ -1.51
SMG1-215ENST00000568239 Q5PR19 223 aa5.61□□□□□ -1.51
SMG1-215ENST00000568239 FAM78BQ5VT40 261 aa5.61□□□□□ -1.51
SMG1-215ENST00000568239 ETFRF1Q6IPR1 90 aa5.61□□□□□ -1.51
SMG1-215ENST00000568239 ARPC1AQ92747 370 aa5.61□□□□□ -1.51
SMG1-215ENST00000568239 AJUBAQ96IF1 538 aa5.61□□□□□ -1.51
SMG1-215ENST00000568239 C20orf24Q9BUV8 137 aa5.61□□□□□ -1.51
SMG1-215ENST00000568239 NKX6-2Q9C056 277 aaPredicted RBP5.61□□□□□ -1.51
SMG1-215ENST00000568239 SEPSECSQ9HD40 501 aaKnown RBP5.61□□□□□ -1.51
SMG1-215ENST00000568239 MRPL36Q9P0J6 103 aaKnown RBP5.61□□□□□ -1.51
SMG1-215ENST00000568239 FNDC10F2Z333 226 aa5.61□□□□□ -1.51
SMG1-215ENST00000568239 IFNA1P01562 189 aa5.61□□□□□ -1.51
SMG1-215ENST00000568239 BCL2P10415 239 aa5.61□□□□□ -1.51
SMG1-215ENST00000568239 UBE2G2P60604 165 aa5.61□□□□□ -1.51
SMG1-215ENST00000568239 ZNF90Q03938 601 aa5.61□□□□□ -1.51
SMG1-215ENST00000568239 ICAM4Q14773 271 aa5.61□□□□□ -1.51
SMG1-215ENST00000568239 ZNF562Q6V9R5 426 aa5.61□□□□□ -1.51
SMG1-215ENST00000568239 CYB561D1Q8N8Q1 229 aa5.61□□□□□ -1.51
SMG1-215ENST00000568239 GATAD1Q8WUU5 269 aa5.61□□□□□ -1.51
SMG1-215ENST00000568239 PUS1Q9Y606 427 aaKnown RBP eCLIP5.61□□□□□ -1.51
SMG1-215ENST00000568239 M0R036 132 aa5.61□□□□□ -1.51
SMG1-215ENST00000568239 CORTO00230 105 aa5.61□□□□□ -1.51
SMG1-215ENST00000568239 SNAPINO95295 136 aa5.61□□□□□ -1.51
SMG1-215ENST00000568239 PAX1P15863 534 aa5.61□□□□□ -1.51
SMG1-215ENST00000568239 CTAG1AP78358 180 aa5.61□□□□□ -1.51
SMG1-215ENST00000568239 NDPQ00604 133 aa5.61□□□□□ -1.51
SMG1-215ENST00000568239 KIAA0141Q14154 515 aaPredicted RBP5.61□□□□□ -1.51
SMG1-215ENST00000568239 KHDC3LQ587J8 217 aa5.61□□□□□ -1.51
SMG1-215ENST00000568239 ZNF506Q5JVG8 444 aa5.61□□□□□ -1.51
SMG1-215ENST00000568239 SPATA31B1PQ5VZV4 182 aa5.61□□□□□ -1.51
SMG1-215ENST00000568239 RBMS3Q6XE24 437 aaKnown RBP5.61□□□□□ -1.51
SMG1-215ENST00000568239 SLC35E3Q7Z769 313 aa5.61□□□□□ -1.51
SMG1-215ENST00000568239 LINC01356Q8N9X3 169 aa5.61□□□□□ -1.51
SMG1-215ENST00000568239 OR5T1Q8NG75 326 aa5.61□□□□□ -1.51
SMG1-215ENST00000568239 GSX1Q9H4S2 264 aaPredicted RBP5.61□□□□□ -1.51
SMG1-215ENST00000568239 SLC45A2Q9UMX9 530 aa5.61□□□□□ -1.51
SMG1-215ENST00000568239 S4R3C0 116 aa5.61□□□□□ -1.51
SMG1-215ENST00000568239 LOC102723971A0A1B0GUV8 181 aa5.6□□□□□ -1.51
SMG1-215ENST00000568239 AVPP01185 164 aa5.6□□□□□ -1.51
SMG1-215ENST00000568239 LINC00869P0C866 280 aa5.6□□□□□ -1.51
SMG1-215ENST00000568239 ARL14EPLP0DKL9 152 aa5.6□□□□□ -1.51
SMG1-215ENST00000568239 AKR1C3P42330 323 aa5.6□□□□□ -1.51
SMG1-215ENST00000568239 PSMB3P49720 205 aa5.6□□□□□ -1.51
SMG1-215ENST00000568239 RHOBP62745 196 aa5.6□□□□□ -1.51
SMG1-215ENST00000568239 PRR20EP86478 221 aa5.6□□□□□ -1.51
SMG1-215ENST00000568239 PRR20CP86479 221 aa5.6□□□□□ -1.51
SMG1-215ENST00000568239 PRR20DP86480 221 aa5.6□□□□□ -1.51
SMG1-215ENST00000568239 PRR20BP86481 221 aa5.6□□□□□ -1.51
SMG1-215ENST00000568239 PRR20AP86496 221 aa5.6□□□□□ -1.51
SMG1-215ENST00000568239 EBI3Q14213 229 aa5.6□□□□□ -1.51
SMG1-215ENST00000568239 LY6EQ16553 131 aa5.6□□□□□ -1.51
SMG1-215ENST00000568239 CST9LP1Q5W188 147 aa5.6□□□□□ -1.51
SMG1-215ENST00000568239 TMEM88Q6PEY1 159 aa5.6□□□□□ -1.51
SMG1-215ENST00000568239 CYP2G1PQ6ZSU1 146 aa5.6□□□□□ -1.51
SMG1-215ENST00000568239 Q8N6K4 173 aa5.6□□□□□ -1.51
SMG1-215ENST00000568239 Q8N9W7 124 aa5.6□□□□□ -1.51
SMG1-215ENST00000568239 SSX3Q99909 188 aa5.6□□□□□ -1.51
SMG1-215ENST00000568239 TNFRSF19Q9NS68 423 aa5.6□□□□□ -1.51
SMG1-215ENST00000568239 CARHSP1Q9Y2V2 147 aaKnown RBP5.6□□□□□ -1.51
SMG1-215ENST00000568239 SONP18583 2426 aaKnown RBP5.6□□□□□ -1.51
SMG1-215ENST00000568239 TRAV20A0A0B4J274 112 aa5.6□□□□□ -1.51
SMG1-215ENST00000568239 PAGE4O60829 102 aa5.6□□□□□ -1.51
SMG1-215ENST00000568239 HSPB1P04792 205 aaKnown RBP5.6□□□□□ -1.51
SMG1-215ENST00000568239 SRP19P09132 144 aaKnown RBP5.6□□□□□ -1.51
SMG1-215ENST00000568239 CTRB1P17538 263 aa5.6□□□□□ -1.51
SMG1-215ENST00000568239 NPBWR1P48145 328 aa5.6□□□□□ -1.51
SMG1-215ENST00000568239 ECSCRQ19T08 205 aa5.6□□□□□ -1.51
SMG1-215ENST00000568239 C9orf152Q5JTZ5 239 aa5.6□□□□□ -1.51
SMG1-215ENST00000568239 CTRB2Q6GPI1 263 aa5.6□□□□□ -1.51
SMG1-215ENST00000568239 MIR17HGQ75NE6 70 aa5.6□□□□□ -1.51
SMG1-215ENST00000568239 ZNF114Q8NC26 417 aa5.6□□□□□ -1.51
SMG1-215ENST00000568239 Q96MF0 132 aa5.6□□□□□ -1.51
SMG1-215ENST00000568239 RBM14Q96PK6 669 aaKnown RBP5.6□□□□□ -1.51
SMG1-215ENST00000568239 SMDT1Q9H4I9 107 aa5.6□□□□□ -1.51
SMG1-215ENST00000568239 ZNF355PQ9NSJ1 428 aa5.6□□□□□ -1.51
SMG1-215ENST00000568239 VAX2Q9UIW0 290 aa5.6□□□□□ -1.51
SMG1-215ENST00000568239 DMRT1Q9Y5R6 373 aa5.6□□□□□ -1.51
SMG1-215ENST00000568239 IGHV7-81A0A0B4J1V7 117 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms