RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 U3KQ87 197 aa6.13□□□□□ -1.43
HDGFL3-205ENST00000568129 IGHV3-35A0A0C4DH35 117 aa6.12□□□□□ -1.43
HDGFL3-205ENST00000568129 IGHV7-4-1A0A0J9YVY3 117 aa6.12□□□□□ -1.43
HDGFL3-205ENST00000568129 FAM90A26D6RGX4 464 aa6.12□□□□□ -1.43
HDGFL3-205ENST00000568129 CHEK1O14757 476 aa6.12□□□□□ -1.43
HDGFL3-205ENST00000568129 CLN5O75503 358 aa6.12□□□□□ -1.43
HDGFL3-205ENST00000568129 NDUFB6O95139 128 aa6.12□□□□□ -1.43
HDGFL3-205ENST00000568129 SFT2D2O95562 160 aa6.12□□□□□ -1.43
HDGFL3-205ENST00000568129 BTCP35070 178 aa6.12□□□□□ -1.43
HDGFL3-205ENST00000568129 TNFRSF9Q07011 255 aa6.12□□□□□ -1.43
HDGFL3-205ENST00000568129 SMCO1Q147U7 214 aa6.12□□□□□ -1.43
HDGFL3-205ENST00000568129 MLANAQ16655 118 aa6.12□□□□□ -1.43
HDGFL3-205ENST00000568129 HAGHQ16775 308 aa6.12□□□□□ -1.43
HDGFL3-205ENST00000568129 CNPY1Q3B7I2 92 aa6.12□□□□□ -1.43
HDGFL3-205ENST00000568129 ANKRD55Q3KP44 614 aa6.12□□□□□ -1.43
HDGFL3-205ENST00000568129 Q56UQ5 140 aa6.12□□□□□ -1.43
HDGFL3-205ENST00000568129 SPINK9Q5DT21 86 aa6.12□□□□□ -1.43
HDGFL3-205ENST00000568129 TOMM20LQ6UXN7 152 aa6.12□□□□□ -1.43
HDGFL3-205ENST00000568129 ASCL2Q99929 193 aa6.12□□□□□ -1.43
HDGFL3-205ENST00000568129 SPAG8Q99932 426 aaPredicted RBP6.12□□□□□ -1.43
HDGFL3-205ENST00000568129 VSIRQ9H7M9 311 aa6.12□□□□□ -1.43
HDGFL3-205ENST00000568129 ZFAND3Q9H8U3 227 aa6.12□□□□□ -1.43
HDGFL3-205ENST00000568129 MRPL36Q9P0J6 103 aaKnown RBP6.12□□□□□ -1.43
HDGFL3-205ENST00000568129 AGRNO00468 2067 aa6.11□□□□□ -1.43
HDGFL3-205ENST00000568129 NBEAL2Q6ZNJ1 2754 aa6.11□□□□□ -1.43
HDGFL3-205ENST00000568129 TRAV30A0A087WSZ9 112 aa6.11□□□□□ -1.43
HDGFL3-205ENST00000568129 TRAV14DV4A0A0A6YYC5 116 aa6.11□□□□□ -1.43
HDGFL3-205ENST00000568129 RBMY1BA6NDE4 496 aaKnown RBP6.11□□□□□ -1.43
HDGFL3-205ENST00000568129 RBMY1EA6NEQ0 496 aaKnown RBP6.11□□□□□ -1.43
HDGFL3-205ENST00000568129 A6NHS1 94 aa6.11□□□□□ -1.43
HDGFL3-205ENST00000568129 PLA2G10O15496 165 aa6.11□□□□□ -1.43
HDGFL3-205ENST00000568129 GNG7O60262 68 aa6.11□□□□□ -1.43
HDGFL3-205ENST00000568129 SCAF4O95104 1147 aaKnown RBP6.11□□□□□ -1.43
HDGFL3-205ENST00000568129 IGKV1-17P01599 117 aa6.11□□□□□ -1.43
HDGFL3-205ENST00000568129 CD5P06127 495 aa6.11□□□□□ -1.43
HDGFL3-205ENST00000568129 RBMY1DP0C7P1 496 aaKnown RBP6.11□□□□□ -1.43
HDGFL3-205ENST00000568129 SLC25A4P12235 298 aa6.11□□□□□ -1.43
HDGFL3-205ENST00000568129 HOXA1P49639 335 aaPredicted RBP6.11□□□□□ -1.43
HDGFL3-205ENST00000568129 CD81P60033 236 aa6.11□□□□□ -1.43
HDGFL3-205ENST00000568129 PPP1R1AQ13522 171 aa6.11□□□□□ -1.43
HDGFL3-205ENST00000568129 PRSS54Q6PEW0 395 aa6.11□□□□□ -1.43
HDGFL3-205ENST00000568129 BTNL8Q6UX41 500 aa6.11□□□□□ -1.43
HDGFL3-205ENST00000568129 ZNF600Q6ZNG1 722 aa6.11□□□□□ -1.43
HDGFL3-205ENST00000568129 NOXA1Q86UR1 476 aa6.11□□□□□ -1.43
HDGFL3-205ENST00000568129 CENPSQ8N2Z9 138 aa6.11□□□□□ -1.43
HDGFL3-205ENST00000568129 SLC24A4Q8NFF2 622 aa6.11□□□□□ -1.43
HDGFL3-205ENST00000568129 ENY2Q9NPA8 101 aa6.11□□□□□ -1.43
HDGFL3-205ENST00000568129 PRR13Q9NZ81 148 aa6.11□□□□□ -1.43
HDGFL3-205ENST00000568129 TMED3Q9Y3Q3 217 aa6.11□□□□□ -1.43
HDGFL3-205ENST00000568129 U3KQE9 123 aa6.11□□□□□ -1.43
HDGFL3-205ENST00000568129 RPS10-NUDT3A0A1W2PQS6 291 aa6.1□□□□□ -1.43
HDGFL3-205ENST00000568129 OR11H12B2RN74 326 aa6.1□□□□□ -1.43
HDGFL3-205ENST00000568129 NXPH3O95157 252 aa6.1□□□□□ -1.43
HDGFL3-205ENST00000568129 IGHV3-48P01763 117 aa6.1□□□□□ -1.43
HDGFL3-205ENST00000568129 IGLC1P0CG04 106 aa6.1□□□□□ -1.43
HDGFL3-205ENST00000568129 IL7P13232 177 aa6.1□□□□□ -1.43
HDGFL3-205ENST00000568129 CRYBB3P26998 211 aa6.1□□□□□ -1.43
HDGFL3-205ENST00000568129 GPX4P36969 197 aaPredicted RBP6.1□□□□□ -1.43
HDGFL3-205ENST00000568129 YPEL3P61236 119 aaPredicted RBP6.1□□□□□ -1.43
HDGFL3-205ENST00000568129 TRIQKQ629K1 86 aa6.1□□□□□ -1.43
HDGFL3-205ENST00000568129 LAMTOR1Q6IAA8 161 aa6.1□□□□□ -1.43
HDGFL3-205ENST00000568129 ETFRF1Q6IPR1 90 aa6.1□□□□□ -1.43
HDGFL3-205ENST00000568129 SLC16A13Q7RTY0 426 aa6.1□□□□□ -1.43
HDGFL3-205ENST00000568129 DEFB125Q8N687 156 aa6.1□□□□□ -1.43
HDGFL3-205ENST00000568129 UBAC2Q8NBM4 344 aa6.1□□□□□ -1.43
HDGFL3-205ENST00000568129 RNASE11Q8TAA1 199 aaKnown RBP6.1□□□□□ -1.43
HDGFL3-205ENST00000568129 PINX1Q96BK5 328 aaKnown RBP6.1□□□□□ -1.43
HDGFL3-205ENST00000568129 RCHY1Q96PM5 261 aa6.1□□□□□ -1.43
HDGFL3-205ENST00000568129 CITED4Q96RK1 184 aa6.1□□□□□ -1.43
HDGFL3-205ENST00000568129 RNF2Q99496 336 aa6.1□□□□□ -1.43
HDGFL3-205ENST00000568129 RHPN1-AS1Q9BWJ2 59 aa6.1□□□□□ -1.43
HDGFL3-205ENST00000568129 HIPK2Q9H2X6 1198 aa6.1□□□□□ -1.43
HDGFL3-205ENST00000568129 ZMAT4Q9H898 229 aa6.1□□□□□ -1.43
HDGFL3-205ENST00000568129 HEYLQ9NQ87 328 aaPredicted RBP6.1□□□□□ -1.43
HDGFL3-205ENST00000568129 CSMD3Q7Z407 3707 aa6.1□□□□□ -1.43
HDGFL3-205ENST00000568129 TRAV2A0A0B4J234 112 aa6.09□□□□□ -1.43
HDGFL3-205ENST00000568129 C9orf170A2RU37 121 aa6.09□□□□□ -1.43
HDGFL3-205ENST00000568129 CEBPZOSA8MTT3 80 aa6.09□□□□□ -1.43
HDGFL3-205ENST00000568129 NPY1RP25929 384 aa6.09□□□□□ -1.43
HDGFL3-205ENST00000568129 OPRK1P41145 380 aa6.09□□□□□ -1.43
HDGFL3-205ENST00000568129 ID3Q02535 119 aa6.09□□□□□ -1.43
HDGFL3-205ENST00000568129 GUCA2BQ16661 112 aa6.09□□□□□ -1.43
HDGFL3-205ENST00000568129 RBPMS2Q6ZRY4 209 aaKnown RBP6.09□□□□□ -1.43
HDGFL3-205ENST00000568129 TMED4Q7Z7H5 227 aa6.09□□□□□ -1.43
HDGFL3-205ENST00000568129 LILRB2Q8N423 598 aa6.09□□□□□ -1.43
HDGFL3-205ENST00000568129 OR52B4Q8NGK2 314 aa6.09□□□□□ -1.43
HDGFL3-205ENST00000568129 OR1S2Q8NGQ3 325 aa6.09□□□□□ -1.43
HDGFL3-205ENST00000568129 DTD1Q8TEA8 209 aa6.09□□□□□ -1.43
HDGFL3-205ENST00000568129 SPATA25Q9BR10 227 aa6.09□□□□□ -1.43
HDGFL3-205ENST00000568129 GINS3Q9BRX5 216 aa6.09□□□□□ -1.43
HDGFL3-205ENST00000568129 C20orf24Q9BUV8 137 aa6.09□□□□□ -1.43
HDGFL3-205ENST00000568129 CCDC32Q9BV29 185 aa6.09□□□□□ -1.43
HDGFL3-205ENST00000568129 RBKSQ9H477 322 aa6.09□□□□□ -1.43
HDGFL3-205ENST00000568129 TUBA4BQ9H853 241 aa6.09□□□□□ -1.43
HDGFL3-205ENST00000568129 EDA2RQ9HAV5 297 aa6.09□□□□□ -1.43
HDGFL3-205ENST00000568129 PUS1Q9Y606 427 aaKnown RBP eCLIP6.09□□□□□ -1.43
HDGFL3-205ENST00000568129 DYNC2H1Q8NCM8 4307 aaKnown RBP6.08□□□□□ -1.44
HDGFL3-205ENST00000568129 IGHV3OR16-8A0A075B7F1 116 aa6.08□□□□□ -1.44
HDGFL3-205ENST00000568129 CENPXA8MT69 81 aa6.08□□□□□ -1.44
HDGFL3-205ENST00000568129 PRSS46E5RG02 174 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms