RNA–Protein interactions for RNA: ENST00000567674.1

CDH3-206, Transcript of cadherin 3, humanhuman

TSL 3

Gene CDH3, Length 892 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-206ENST00000567674 SLC25A21Q9BQT8 299 aaPredicted RBP8.37□□□□□ -1.07
CDH3-206ENST00000567674 CHRDL1Q9BU40 450 aa8.37□□□□□ -1.07
CDH3-206ENST00000567674 GGTLC1Q9BX51 225 aa8.37□□□□□ -1.07
CDH3-206ENST00000567674 SRD5A3Q9H8P0 318 aa8.37□□□□□ -1.07
CDH3-206ENST00000567674 SHPKQ9UHJ6 478 aa8.37□□□□□ -1.07
CDH3-206ENST00000567674 HYDINQ4G0P3 5121 aa8.36□□□□□ -1.07
CDH3-206ENST00000567674 RBMY1BA6NDE4 496 aaKnown RBP8.36□□□□□ -1.07
CDH3-206ENST00000567674 RBMY1EA6NEQ0 496 aaKnown RBP8.36□□□□□ -1.07
CDH3-206ENST00000567674 CLN5O75503 358 aa8.36□□□□□ -1.07
CDH3-206ENST00000567674 DFFBO76075 338 aa8.36□□□□□ -1.07
CDH3-206ENST00000567674 TMEM50AO95807 157 aa8.36□□□□□ -1.07
CDH3-206ENST00000567674 OR5AC1P0C628 307 aa8.36□□□□□ -1.07
CDH3-206ENST00000567674 RBMY1DP0C7P1 496 aaKnown RBP8.36□□□□□ -1.07
CDH3-206ENST00000567674 RNASE2P10153 161 aaKnown RBP8.36□□□□□ -1.07
CDH3-206ENST00000567674 SLC25A6P12236 298 aa8.36□□□□□ -1.07
CDH3-206ENST00000567674 PI3P19957 117 aa8.36□□□□□ -1.07
CDH3-206ENST00000567674 S100A5P33763 92 aa8.36□□□□□ -1.07
CDH3-206ENST00000567674 ETV6P41212 452 aa8.36□□□□□ -1.07
CDH3-206ENST00000567674 CCR6P51684 374 aa8.36□□□□□ -1.07
CDH3-206ENST00000567674 PPP5CP53041 499 aa8.36□□□□□ -1.07
CDH3-206ENST00000567674 UBAC2Q8NBM4 344 aa8.36□□□□□ -1.07
CDH3-206ENST00000567674 TMEM116Q8NCL8 245 aa8.36□□□□□ -1.07
CDH3-206ENST00000567674 OR51S1Q8NGJ8 323 aa8.36□□□□□ -1.07
CDH3-206ENST00000567674 RNASE11Q8TAA1 199 aaKnown RBP8.36□□□□□ -1.07
CDH3-206ENST00000567674 S4R3C0 116 aa8.36□□□□□ -1.07
CDH3-206ENST00000567674 U3KQ87 197 aa8.36□□□□□ -1.07
CDH3-206ENST00000567674 CHEK1O14757 476 aa8.35□□□□□ -1.07
CDH3-206ENST00000567674 TMEM128Q5BJH2 165 aa8.35□□□□□ -1.07
CDH3-206ENST00000567674 NMSQ5H8A3 153 aa8.35□□□□□ -1.07
CDH3-206ENST00000567674 FAM90A2PQ658T7 463 aa8.35□□□□□ -1.07
CDH3-206ENST00000567674 SELENOHQ8IZQ5 122 aaKnown RBP8.35□□□□□ -1.07
CDH3-206ENST00000567674 LGI3Q8N145 548 aa8.35□□□□□ -1.07
CDH3-206ENST00000567674 LRTM2Q8N967 370 aa8.35□□□□□ -1.07
CDH3-206ENST00000567674 CACNG8Q8WXS5 425 aa8.35□□□□□ -1.07
CDH3-206ENST00000567674 RHPN1-AS1Q9BWJ2 59 aa8.35□□□□□ -1.07
CDH3-206ENST00000567674 VSIRQ9H7M9 311 aa8.35□□□□□ -1.07
CDH3-206ENST00000567674 DNAH1Q9P2D7 4330 aa8.34□□□□□ -1.07
CDH3-206ENST00000567674 CSMD3Q7Z407 3707 aa8.34□□□□□ -1.07
CDH3-206ENST00000567674 SACSQ9NZJ4 4579 aa8.34□□□□□ -1.07
CDH3-206ENST00000567674 PCLOQ9Y6V0 5065 aa8.34□□□□□ -1.07
CDH3-206ENST00000567674 A0A1B0GU03 582 aa8.34□□□□□ -1.07
CDH3-206ENST00000567674 SCAF4O95104 1147 aaKnown RBP8.34□□□□□ -1.07
CDH3-206ENST00000567674 SULT1A3P0DMM9 295 aa8.34□□□□□ -1.07
CDH3-206ENST00000567674 SULT1A4P0DMN0 295 aa8.34□□□□□ -1.07
CDH3-206ENST00000567674 HOXA1P49639 335 aaPredicted RBP8.34□□□□□ -1.07
CDH3-206ENST00000567674 EIF2B2P49770 351 aaKnown RBP8.34□□□□□ -1.07
CDH3-206ENST00000567674 AP2S1P53680 142 aaPredicted RBP8.34□□□□□ -1.07
CDH3-206ENST00000567674 UBE2MP61081 183 aaKnown RBP8.34□□□□□ -1.07
CDH3-206ENST00000567674 YPEL3P61236 119 aaPredicted RBP8.34□□□□□ -1.07
CDH3-206ENST00000567674 TMEM187Q14656 261 aa8.34□□□□□ -1.07
CDH3-206ENST00000567674 CNPY1Q3B7I2 92 aa8.34□□□□□ -1.07
CDH3-206ENST00000567674 SP6Q3SY56 376 aa8.34□□□□□ -1.07
CDH3-206ENST00000567674 TMEM268Q5VZI3 342 aa8.34□□□□□ -1.07
CDH3-206ENST00000567674 TOMM5Q8N4H5 51 aa8.34□□□□□ -1.07
CDH3-206ENST00000567674 NARS2Q96I59 477 aaKnown RBP8.34□□□□□ -1.07
CDH3-206ENST00000567674 C20orf24Q9BUV8 137 aa8.34□□□□□ -1.07
CDH3-206ENST00000567674 SEPSECSQ9HD40 501 aaKnown RBP8.34□□□□□ -1.07
CDH3-206ENST00000567674 FAM90A26D6RGX4 464 aa8.33□□□□□ -1.08
CDH3-206ENST00000567674 YIF1AO95070 293 aa8.33□□□□□ -1.08
CDH3-206ENST00000567674 NPPCP23582 126 aa8.33□□□□□ -1.08
CDH3-206ENST00000567674 CRYBB3P26998 211 aa8.33□□□□□ -1.08
CDH3-206ENST00000567674 OPRK1P41145 380 aa8.33□□□□□ -1.08
CDH3-206ENST00000567674 SMCO1Q147U7 214 aa8.33□□□□□ -1.08
CDH3-206ENST00000567674 TMEM41BQ5BJD5 291 aa8.33□□□□□ -1.08
CDH3-206ENST00000567674 RNASE12Q5GAN4 147 aaKnown RBP8.33□□□□□ -1.08
CDH3-206ENST00000567674 TOMM20LQ6UXN7 152 aa8.33□□□□□ -1.08
CDH3-206ENST00000567674 Q6ZRM9 215 aa8.33□□□□□ -1.08
CDH3-206ENST00000567674 OR1S2Q8NGQ3 325 aa8.33□□□□□ -1.08
CDH3-206ENST00000567674 PINX1Q96BK5 328 aaKnown RBP8.33□□□□□ -1.08
CDH3-206ENST00000567674 GPR146Q96CH1 333 aa8.33□□□□□ -1.08
CDH3-206ENST00000567674 HEYLQ9NQ87 328 aaPredicted RBP8.33□□□□□ -1.08
CDH3-206ENST00000567674 NDUFA13Q9P0J0 144 aa8.33□□□□□ -1.08
CDH3-206ENST00000567674 HSPB7Q9UBY9 170 aa8.33□□□□□ -1.08
CDH3-206ENST00000567674 PFDN2Q9UHV9 154 aa8.33□□□□□ -1.08
CDH3-206ENST00000567674 IGHV3-35A0A0C4DH35 117 aa8.32□□□□□ -1.08
CDH3-206ENST00000567674 NAP1L6A6NFF2 107 aa8.32□□□□□ -1.08
CDH3-206ENST00000567674 EDN2P20800 178 aa8.32□□□□□ -1.08
CDH3-206ENST00000567674 GPX4P36969 197 aaPredicted RBP8.32□□□□□ -1.08
CDH3-206ENST00000567674 NUP62P37198 522 aaPredicted RBP8.32□□□□□ -1.08
CDH3-206ENST00000567674 TNFRSF9Q07011 255 aa8.32□□□□□ -1.08
CDH3-206ENST00000567674 KLF9Q13886 244 aaPredicted RBP8.32□□□□□ -1.08
CDH3-206ENST00000567674 SPANXN2Q5MJ10 180 aa8.32□□□□□ -1.08
CDH3-206ENST00000567674 CCDC190Q86UF4 302 aa8.32□□□□□ -1.08
CDH3-206ENST00000567674 TMEM217Q8N7C4 229 aa8.32□□□□□ -1.08
CDH3-206ENST00000567674 STPG3Q8N7X2 389 aa8.32□□□□□ -1.08
CDH3-206ENST00000567674 SLC24A4Q8NFF2 622 aa8.32□□□□□ -1.08
CDH3-206ENST00000567674 LHFPL5Q8TAF8 219 aa8.32□□□□□ -1.08
CDH3-206ENST00000567674 Q8WTZ3 238 aa8.32□□□□□ -1.08
CDH3-206ENST00000567674 GATAD1Q8WUU5 269 aa8.32□□□□□ -1.08
CDH3-206ENST00000567674 GRAMD2BQ96HH9 432 aa8.32□□□□□ -1.08
CDH3-206ENST00000567674 ZNF414Q96IQ9 312 aa8.32□□□□□ -1.08
CDH3-206ENST00000567674 METTL26Q96S19 204 aa8.32□□□□□ -1.08
CDH3-206ENST00000567674 RNF2Q99496 336 aa8.32□□□□□ -1.08
CDH3-206ENST00000567674 ZFAND3Q9H8U3 227 aa8.32□□□□□ -1.08
CDH3-206ENST00000567674 CACNG5Q9UF02 275 aa8.32□□□□□ -1.08
CDH3-206ENST00000567674 TMED3Q9Y3Q3 217 aa8.32□□□□□ -1.08
CDH3-206ENST00000567674 PUS1Q9Y606 427 aaKnown RBP eCLIP8.32□□□□□ -1.08
CDH3-206ENST00000567674 A0A0G2JRQ6 117 aa8.31□□□□□ -1.08
CDH3-206ENST00000567674 MED6O75586 246 aa8.31□□□□□ -1.08
CDH3-206ENST00000567674 AKR1C4P17516 323 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms