RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, human

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF3B3-209	ENST00000567635	ERH	P84090	104 aa	Known RBP	5.2	□□□□□ -1.58
SF3B3-209	ENST00000567635	PRCD	Q00LT1	54 aa		5.2	□□□□□ -1.58
SF3B3-209	ENST00000567635	MEF2D	Q14814	521 aa		5.2	□□□□□ -1.58
SF3B3-209	ENST00000567635	IZUMO4	Q1ZYL8	232 aa		5.2	□□□□□ -1.58
SF3B3-209	ENST00000567635	SP6	Q3SY56	376 aa		5.2	□□□□□ -1.58
SF3B3-209	ENST00000567635	LINC00322	Q6ZN03	302 aa	Predicted RBP	5.2	□□□□□ -1.58
SF3B3-209	ENST00000567635	RBPMS2	Q6ZRY4	209 aa	Known RBP	5.2	□□□□□ -1.58
SF3B3-209	ENST00000567635	SLC16A13	Q7RTY0	426 aa		5.2	□□□□□ -1.58
SF3B3-209	ENST00000567635	TMEM61	Q8N0U2	210 aa		5.2	□□□□□ -1.58
SF3B3-209	ENST00000567635	OR2C3	Q8N628	320 aa		5.2	□□□□□ -1.58
SF3B3-209	ENST00000567635	DEFB125	Q8N687	156 aa		5.2	□□□□□ -1.58
SF3B3-209	ENST00000567635	CCDC71L	Q8N9Z2	235 aa		5.2	□□□□□ -1.58
SF3B3-209	ENST00000567635	OR4D10	Q8NGI6	311 aa		5.2	□□□□□ -1.58
SF3B3-209	ENST00000567635	OR13C8	Q8NGS7	320 aa		5.2	□□□□□ -1.58
SF3B3-209	ENST00000567635	MARCH1	Q8TCQ1	289 aa		5.2	□□□□□ -1.58
SF3B3-209	ENST00000567635	MISP3	Q96FF7	219 aa		5.2	□□□□□ -1.58
SF3B3-209	ENST00000567635	HYLS1	Q96M11	299 aa		5.2	□□□□□ -1.58
SF3B3-209	ENST00000567635	TP53RK	Q96S44	253 aa		5.2	□□□□□ -1.58
SF3B3-209	ENST00000567635	TXN2	Q99757	166 aa		5.2	□□□□□ -1.58
SF3B3-209	ENST00000567635	SPATA25	Q9BR10	227 aa		5.2	□□□□□ -1.58
SF3B3-209	ENST00000567635	MARVELD1	Q9BSK0	173 aa		5.2	□□□□□ -1.58
SF3B3-209	ENST00000567635	CHRDL1	Q9BU40	450 aa		5.2	□□□□□ -1.58
SF3B3-209	ENST00000567635	PLEKHA3	Q9HB20	300 aa		5.2	□□□□□ -1.58
SF3B3-209	ENST00000567635	SELENOK	Q9Y6D0	94 aa		5.2	□□□□□ -1.58
SF3B3-209	ENST00000567635	AGRN	O00468	2067 aa		5.2	□□□□□ -1.58
SF3B3-209	ENST00000567635		A0A0B4J293	547 aa		5.19	□□□□□ -1.58
SF3B3-209	ENST00000567635	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	5.19	□□□□□ -1.58
SF3B3-209	ENST00000567635	RBMY1B	A6NDE4	496 aa	Known RBP	5.19	□□□□□ -1.58
SF3B3-209	ENST00000567635	RBMY1E	A6NEQ0	496 aa	Known RBP	5.19	□□□□□ -1.58
SF3B3-209	ENST00000567635	DISC1	C4P0D8	188 aa		5.19	□□□□□ -1.58
SF3B3-209	ENST00000567635	INMT-MINDY4	F8WBC2	141 aa		5.19	□□□□□ -1.58
SF3B3-209	ENST00000567635		I3L2K1	104 aa		5.19	□□□□□ -1.58
SF3B3-209	ENST00000567635		K7EMT4	169 aa		5.19	□□□□□ -1.58
SF3B3-209	ENST00000567635	NUPL2	O15504	423 aa	Known RBP	5.19	□□□□□ -1.58
SF3B3-209	ENST00000567635	SCAF4	O95104	1147 aa	Known RBP	5.19	□□□□□ -1.58
SF3B3-209	ENST00000567635	IFNA17	P01571	189 aa		5.19	□□□□□ -1.58
SF3B3-209	ENST00000567635	IGKV1-5	P01602	117 aa		5.19	□□□□□ -1.58
SF3B3-209	ENST00000567635	CTSD	P07339	412 aa	Predicted RBP	5.19	□□□□□ -1.58
SF3B3-209	ENST00000567635	CTSG	P08311	255 aa		5.19	□□□□□ -1.58
SF3B3-209	ENST00000567635	RBMY1D	P0C7P1	496 aa	Known RBP	5.19	□□□□□ -1.58
SF3B3-209	ENST00000567635		P0C879	139 aa		5.19	□□□□□ -1.58
SF3B3-209	ENST00000567635	AKAIN1	P0CW23	69 aa		5.19	□□□□□ -1.58
SF3B3-209	ENST00000567635	ADM	P35318	185 aa		5.19	□□□□□ -1.58
SF3B3-209	ENST00000567635	SNCA	P37840	140 aa		5.19	□□□□□ -1.58
SF3B3-209	ENST00000567635		Q56UQ5	140 aa		5.19	□□□□□ -1.58
SF3B3-209	ENST00000567635	BTNL8	Q6UX41	500 aa		5.19	□□□□□ -1.58
SF3B3-209	ENST00000567635	COMMD7	Q86VX2	200 aa		5.19	□□□□□ -1.58
SF3B3-209	ENST00000567635	UBAC2	Q8NBM4	344 aa		5.19	□□□□□ -1.58
SF3B3-209	ENST00000567635	OR52B4	Q8NGK2	314 aa		5.19	□□□□□ -1.58
SF3B3-209	ENST00000567635	TMEM190	Q8WZ59	177 aa		5.19	□□□□□ -1.58
SF3B3-209	ENST00000567635	RRNAD1	Q96FB5	475 aa	Known RBP	5.19	□□□□□ -1.58
SF3B3-209	ENST00000567635	RTBDN	Q9BSG5	229 aa	Predicted RBP	5.19	□□□□□ -1.58
SF3B3-209	ENST00000567635	C20orf24	Q9BUV8	137 aa		5.19	□□□□□ -1.58
SF3B3-209	ENST00000567635	C5orf66	Q9H5L9	145 aa		5.19	□□□□□ -1.58
SF3B3-209	ENST00000567635	SRD5A3	Q9H8P0	318 aa		5.19	□□□□□ -1.58
SF3B3-209	ENST00000567635	DAZ1	Q9NQZ3	744 aa	Known RBP	5.19	□□□□□ -1.58
SF3B3-209	ENST00000567635	C14orf166	Q9Y224	244 aa	Known RBP	5.19	□□□□□ -1.58
SF3B3-209	ENST00000567635		F8W735	103 aa	Predicted RBP	5.18	□□□□□ -1.58
SF3B3-209	ENST00000567635	INS-IGF2	F8WCM5	200 aa		5.18	□□□□□ -1.58
SF3B3-209	ENST00000567635	ST8SIA3	O43173	380 aa		5.18	□□□□□ -1.58
SF3B3-209	ENST00000567635	GATC	O43716	136 aa	Known RBP	5.18	□□□□□ -1.58
SF3B3-209	ENST00000567635	GNG7	O60262	68 aa		5.18	□□□□□ -1.58
SF3B3-209	ENST00000567635	CDS2	O95674	445 aa		5.18	□□□□□ -1.58
SF3B3-209	ENST00000567635	MT-CO2	P00403	227 aa		5.18	□□□□□ -1.58
SF3B3-209	ENST00000567635	IFNA7	P01567	189 aa		5.18	□□□□□ -1.58
SF3B3-209	ENST00000567635	IGHV3-48	P01763	117 aa		5.18	□□□□□ -1.58
SF3B3-209	ENST00000567635	TCRB	P04435	133 aa		5.18	□□□□□ -1.58
SF3B3-209	ENST00000567635	BTF3	P20290	206 aa	Known RBP	5.18	□□□□□ -1.58
SF3B3-209	ENST00000567635	UCP1	P25874	307 aa		5.18	□□□□□ -1.58
SF3B3-209	ENST00000567635	FCGR2B	P31994	310 aa	Predicted RBP	5.18	□□□□□ -1.58
SF3B3-209	ENST00000567635	BTC	P35070	178 aa		5.18	□□□□□ -1.58
SF3B3-209	ENST00000567635	FAU	P35544	74 aa	Known RBP	5.18	□□□□□ -1.58
SF3B3-209	ENST00000567635	AKR1C2	P52895	323 aa		5.18	□□□□□ -1.58
SF3B3-209	ENST00000567635	SUB1	P53999	127 aa	Known RBP eCLIP	5.18	□□□□□ -1.58	1e-12	■□□□□ 10.1
SF3B3-209	ENST00000567635	DHODH	Q02127	395 aa		5.18	□□□□□ -1.58
SF3B3-209	ENST00000567635	REL	Q04864	619 aa	Predicted RBP	5.18	□□□□□ -1.58
SF3B3-209	ENST00000567635	SURF2	Q15527	256 aa	Predicted RBP	5.18	□□□□□ -1.58
SF3B3-209	ENST00000567635		Q5BKY6	102 aa		5.18	□□□□□ -1.58
SF3B3-209	ENST00000567635	SPINK9	Q5DT21	86 aa		5.18	□□□□□ -1.58
SF3B3-209	ENST00000567635	CLLU1	Q5K131	121 aa		5.18	□□□□□ -1.58
SF3B3-209	ENST00000567635	CASC10	Q5T4H9	136 aa		5.18	□□□□□ -1.58
SF3B3-209	ENST00000567635	LAMTOR1	Q6IAA8	161 aa		5.18	□□□□□ -1.58
SF3B3-209	ENST00000567635	SLC35G3	Q8N808	338 aa		5.18	□□□□□ -1.58
SF3B3-209	ENST00000567635	ZNF114	Q8NC26	417 aa		5.18	□□□□□ -1.58
SF3B3-209	ENST00000567635	OR4C16	Q8NGL9	310 aa		5.18	□□□□□ -1.58
SF3B3-209	ENST00000567635	RNASE11	Q8TAA1	199 aa	Known RBP	5.18	□□□□□ -1.58
SF3B3-209	ENST00000567635	GLYATL2	Q8WU03	294 aa		5.18	□□□□□ -1.58
SF3B3-209	ENST00000567635	PRRT1	Q99946	306 aa		5.18	□□□□□ -1.58
SF3B3-209	ENST00000567635	PDCD10	Q9BUL8	212 aa		5.18	□□□□□ -1.58
SF3B3-209	ENST00000567635	TMEM222	Q9H0R3	208 aa		5.18	□□□□□ -1.58
SF3B3-209	ENST00000567635	HIPK2	Q9H2X6	1198 aa		5.18	□□□□□ -1.58
SF3B3-209	ENST00000567635	ENY2	Q9NPA8	101 aa		5.18	□□□□□ -1.58
SF3B3-209	ENST00000567635	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	5.18	□□□□□ -1.58
SF3B3-209	ENST00000567635	GPR132	Q9UNW8	380 aa		5.18	□□□□□ -1.58
SF3B3-209	ENST00000567635	HSPB11	Q9Y547	144 aa		5.18	□□□□□ -1.58
SF3B3-209	ENST00000567635	TENM2	Q9NT68	2774 aa		5.18	□□□□□ -1.58
SF3B3-209	ENST00000567635	IGHV3OR16-8	A0A075B7F1	116 aa		5.17	□□□□□ -1.58
SF3B3-209	ENST00000567635	C15orf62	A8K5M9	175 aa		5.17	□□□□□ -1.58
SF3B3-209	ENST00000567635	KRBOX1	C9JBD0	128 aa		5.17	□□□□□ -1.58
SF3B3-209	ENST00000567635	ZNF207	O43670	478 aa	Known RBP	5.17	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms