RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 K7EIL1 84 aa9.41□□□□□ -0.9
RNF40-211ENST00000567365 SYNGR2O43760 224 aa9.41□□□□□ -0.9
RNF40-211ENST00000567365 SAP30O75446 220 aa9.41□□□□□ -0.9
RNF40-211ENST00000567365 C8orf88P0DMB2 117 aa9.41□□□□□ -0.9
RNF40-211ENST00000567365 NPY1RP25929 384 aa9.41□□□□□ -0.9
RNF40-211ENST00000567365 ELLP55199 621 aaPredicted RBP9.41□□□□□ -0.9
RNF40-211ENST00000567365 OR4X1Q8NH49 305 aa9.41□□□□□ -0.9
RNF40-211ENST00000567365 TMEM190Q8WZ59 177 aa9.41□□□□□ -0.9
RNF40-211ENST00000567365 PINX1Q96BK5 328 aaKnown RBP9.41□□□□□ -0.9
RNF40-211ENST00000567365 OR4C12Q96R67 309 aa9.41□□□□□ -0.9
RNF40-211ENST00000567365 HIPK2Q9H2X6 1198 aa9.41□□□□□ -0.9
RNF40-211ENST00000567365 GAR1Q9NY12 217 aaKnown RBP9.41□□□□□ -0.9
RNF40-211ENST00000567365 COL7A1Q02388 2944 aa9.41□□□□□ -0.9
RNF40-211ENST00000567365 PRSS46E5RG02 174 aa9.4□□□□□ -0.9
RNF40-211ENST00000567365 TMEM50AO95807 157 aa9.4□□□□□ -0.9
RNF40-211ENST00000567365 PAX9P55771 341 aa9.4□□□□□ -0.9
RNF40-211ENST00000567365 DEFA1P59665 94 aa9.4□□□□□ -0.9
RNF40-211ENST00000567365 DEFA3P59666 94 aa9.4□□□□□ -0.9
RNF40-211ENST00000567365 IL15RAQ13261 267 aa9.4□□□□□ -0.9
RNF40-211ENST00000567365 FAM106AQ4KMX7 169 aa9.4□□□□□ -0.9
RNF40-211ENST00000567365 PRSS54Q6PEW0 395 aa9.4□□□□□ -0.9
RNF40-211ENST00000567365 C12orf45Q8N5I9 185 aaPredicted RBP9.4□□□□□ -0.9
RNF40-211ENST00000567365 ZBTB8BQ8NAP8 495 aaPredicted RBP9.4□□□□□ -0.9
RNF40-211ENST00000567365 TMEM116Q8NCL8 245 aa9.4□□□□□ -0.9
RNF40-211ENST00000567365 PEMTQ9UBM1 199 aa9.4□□□□□ -0.9
RNF40-211ENST00000567365 ZMAT5Q9UDW3 170 aaKnown RBP9.4□□□□□ -0.9
RNF40-211ENST00000567365 IGHV3-35A0A0C4DH35 117 aa9.39□□□□□ -0.91
RNF40-211ENST00000567365 SNRPGP15A8MWD9 76 aa9.39□□□□□ -0.91
RNF40-211ENST00000567365 INMT-MINDY4F8WBC2 141 aa9.39□□□□□ -0.91
RNF40-211ENST00000567365 NDUFA4O00483 81 aa9.39□□□□□ -0.91
RNF40-211ENST00000567365 CLN5O75503 358 aa9.39□□□□□ -0.91
RNF40-211ENST00000567365 MED6O75586 246 aa9.39□□□□□ -0.91
RNF40-211ENST00000567365 IFNA21P01568 189 aa9.39□□□□□ -0.91
RNF40-211ENST00000567365 IGKV1-17P01599 117 aa9.39□□□□□ -0.91
RNF40-211ENST00000567365 FOLR2P14207 255 aa9.39□□□□□ -0.91
RNF40-211ENST00000567365 SPNP16150 400 aa9.39□□□□□ -0.91
RNF40-211ENST00000567365 OPRK1P41145 380 aa9.39□□□□□ -0.91
RNF40-211ENST00000567365 NKX2-1P43699 371 aaPredicted RBP9.39□□□□□ -0.91
RNF40-211ENST00000567365 NPBWR1P48145 328 aa9.39□□□□□ -0.91
RNF40-211ENST00000567365 CD69Q07108 199 aa9.39□□□□□ -0.91
RNF40-211ENST00000567365 TM4SF20Q53R12 229 aa9.39□□□□□ -0.91
RNF40-211ENST00000567365 Q56UQ5 140 aa9.39□□□□□ -0.91
RNF40-211ENST00000567365 NOXA1Q86UR1 476 aa9.39□□□□□ -0.91
RNF40-211ENST00000567365 HAPLN4Q86UW8 402 aa9.39□□□□□ -0.91
RNF40-211ENST00000567365 UBAC2Q8NBM4 344 aa9.39□□□□□ -0.91
RNF40-211ENST00000567365 MAGT1Q9H0U3 335 aa9.39□□□□□ -0.91
RNF40-211ENST00000567365 C11orf1Q9H5F2 150 aa9.39□□□□□ -0.91
RNF40-211ENST00000567365 ZNF256Q9Y2P7 627 aaPredicted RBP9.39□□□□□ -0.91
RNF40-211ENST00000567365 IZUMO1RA6ND01 250 aa9.38□□□□□ -0.91
RNF40-211ENST00000567365 K7EMT4 169 aa9.38□□□□□ -0.91
RNF40-211ENST00000567365 CCSO14618 274 aa9.38□□□□□ -0.91
RNF40-211ENST00000567365 LY86O95711 162 aa9.38□□□□□ -0.91
RNF40-211ENST00000567365 IFNA10P01566 189 aa9.38□□□□□ -0.91
RNF40-211ENST00000567365 IGLC1P0CG04 106 aa9.38□□□□□ -0.91
RNF40-211ENST00000567365 IAPPP10997 89 aa9.38□□□□□ -0.91
RNF40-211ENST00000567365 SLC25A4P12235 298 aa9.38□□□□□ -0.91
RNF40-211ENST00000567365 CBLN1P23435 193 aa9.38□□□□□ -0.91
RNF40-211ENST00000567365 POLR2GP62487 172 aaKnown RBP eCLIP9.38□□□□□ -0.91
RNF40-211ENST00000567365 IAH1Q2TAA2 248 aaPredicted RBP9.38□□□□□ -0.91
RNF40-211ENST00000567365 DEFB114Q30KQ6 69 aa9.38□□□□□ -0.91
RNF40-211ENST00000567365 CACNG8Q8WXS5 425 aa9.38□□□□□ -0.91
RNF40-211ENST00000567365 CIB3Q96Q77 187 aaPredicted RBP9.38□□□□□ -0.91
RNF40-211ENST00000567365 ZFAND3Q9H8U3 227 aa9.38□□□□□ -0.91
RNF40-211ENST00000567365 RCL1Q9Y2P8 373 aaKnown RBP9.38□□□□□ -0.91
RNF40-211ENST00000567365 LSM4Q9Y4Z0 139 aaKnown RBP9.38□□□□□ -0.91
RNF40-211ENST00000567365 RPS10-NUDT3A0A1W2PQS6 291 aa9.37□□□□□ -0.91
RNF40-211ENST00000567365 PMS2P5A8MQ11 134 aa9.37□□□□□ -0.91
RNF40-211ENST00000567365 WRBO00258 174 aa9.37□□□□□ -0.91
RNF40-211ENST00000567365 NUPL2O15504 423 aaKnown RBP9.37□□□□□ -0.91
RNF40-211ENST00000567365 GNG7O60262 68 aa9.37□□□□□ -0.91
RNF40-211ENST00000567365 PRAF2O60831 178 aa9.37□□□□□ -0.91
RNF40-211ENST00000567365 MBPP02686 304 aaPredicted RBP9.37□□□□□ -0.91
RNF40-211ENST00000567365 GPX4P36969 197 aaPredicted RBP9.37□□□□□ -0.91
RNF40-211ENST00000567365 RELQ04864 619 aaPredicted RBP9.37□□□□□ -0.91
RNF40-211ENST00000567365 OR2K2Q8NGT1 345 aa9.37□□□□□ -0.91
RNF40-211ENST00000567365 MARC2Q969Z3 335 aa9.37□□□□□ -0.91
RNF40-211ENST00000567365 SMIM8Q96KF7 97 aa9.37□□□□□ -0.91
RNF40-211ENST00000567365 PRR25Q96S07 402 aa9.37□□□□□ -0.91
RNF40-211ENST00000567365 PALMDQ9NP74 551 aa9.37□□□□□ -0.91
RNF40-211ENST00000567365 MLXQ9UH92 298 aa9.37□□□□□ -0.91
RNF40-211ENST00000567365 UFC1Q9Y3C8 167 aa9.37□□□□□ -0.91
RNF40-211ENST00000567365 ZNF320A2RRD8 509 aa9.36□□□□□ -0.91
RNF40-211ENST00000567365 C7orf66A4D0T2 115 aa9.36□□□□□ -0.91
RNF40-211ENST00000567365 ZNF785A8K8V0 405 aa9.36□□□□□ -0.91
RNF40-211ENST00000567365 GP9P14770 177 aa9.36□□□□□ -0.91
RNF40-211ENST00000567365 RND2P52198 227 aa9.36□□□□□ -0.91
RNF40-211ENST00000567365 CD300EQ496F6 205 aaPredicted RBP9.36□□□□□ -0.91
RNF40-211ENST00000567365 TOMM20LQ6UXN7 152 aa9.36□□□□□ -0.91
RNF40-211ENST00000567365 ZNF600Q6ZNG1 722 aa9.36□□□□□ -0.91
RNF40-211ENST00000567365 SLC16A13Q7RTY0 426 aa9.36□□□□□ -0.91
RNF40-211ENST00000567365 Q8N1Y9 231 aa9.36□□□□□ -0.91
RNF40-211ENST00000567365 UXS1Q8NBZ7 420 aa9.36□□□□□ -0.91
RNF40-211ENST00000567365 DAZ1Q9NQZ3 744 aaKnown RBP9.36□□□□□ -0.91
RNF40-211ENST00000567365 TECRQ9NZ01 308 aaKnown RBP9.36□□□□□ -0.91
RNF40-211ENST00000567365 MRPL27Q9P0M9 148 aaKnown RBP9.36□□□□□ -0.91
RNF40-211ENST00000567365 IGKV1D-37A0A075B6S9 117 aa9.35□□□□□ -0.91
RNF40-211ENST00000567365 TRAV30A0A087WSZ9 112 aa9.35□□□□□ -0.91
RNF40-211ENST00000567365 SCAF4O95104 1147 aaKnown RBP9.35□□□□□ -0.91
RNF40-211ENST00000567365 PTTG1O95997 202 aa9.35□□□□□ -0.91
RNF40-211ENST00000567365 IFNA4P05014 189 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms