RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 TPRP12270 2363 aaKnown RBP13.58□□□□□ -0.24
CMTM3-213ENST00000566756 GGTLC3B5MD39 225 aa13.58□□□□□ -0.24
CMTM3-213ENST00000566756 NDUFB7P17568 137 aa13.58□□□□□ -0.24
CMTM3-213ENST00000566756 MRPL52Q86TS9 123 aaKnown RBP13.58□□□□□ -0.24
CMTM3-213ENST00000566756 IGF2BP2-AS1Q96M15 143 aa13.58□□□□□ -0.24
CMTM3-213ENST00000566756 MRPL20Q9BYC9 149 aaKnown RBP13.58□□□□□ -0.24
CMTM3-213ENST00000566756 POLR3KQ9Y2Y1 108 aaPredicted RBP13.58□□□□□ -0.24
CMTM3-213ENST00000566756 PKD1L2Q7Z442 2459 aa13.58□□□□□ -0.24
CMTM3-213ENST00000566756 COL6A6A6NMZ7 2263 aa13.57□□□□□ -0.24
CMTM3-213ENST00000566756 C17orf100A8MU93 164 aa13.57□□□□□ -0.24
CMTM3-213ENST00000566756 SUB1P53999 127 aaKnown RBP eCLIP13.57□□□□□ -0.24
CMTM3-213ENST00000566756 LINC00310P59036 64 aa13.57□□□□□ -0.24
CMTM3-213ENST00000566756 MOB3BQ86TA1 216 aa13.57□□□□□ -0.24
CMTM3-213ENST00000566756 OR4C13Q8NGP0 309 aa13.57□□□□□ -0.24
CMTM3-213ENST00000566756 FLYWCH2Q96CP2 140 aaKnown RBP13.57□□□□□ -0.24
CMTM3-213ENST00000566756 MISP3Q96FF7 219 aa13.57□□□□□ -0.24
CMTM3-213ENST00000566756 NBASA2RRP1 2371 aa13.57□□□□□ -0.24
CMTM3-213ENST00000566756 DYSFO75923 2080 aa13.57□□□□□ -0.24
CMTM3-213ENST00000566756 FAM90A27PA6NNH2 459 aa13.56□□□□□ -0.24
CMTM3-213ENST00000566756 SNURFLB1AK76 121 aa13.56□□□□□ -0.24
CMTM3-213ENST00000566756 SHISA9B4DS77 424 aa13.56□□□□□ -0.24
CMTM3-213ENST00000566756 OR10J3Q5JRS4 329 aa13.56□□□□□ -0.24
CMTM3-213ENST00000566756 OR8I2Q8N0Y5 310 aa13.56□□□□□ -0.24
CMTM3-213ENST00000566756 OR1L4Q8NGR5 311 aa13.56□□□□□ -0.24
CMTM3-213ENST00000566756 OR9G1Q8NH87 305 aa13.56□□□□□ -0.24
CMTM3-213ENST00000566756 TMEM186Q96B77 213 aa13.56□□□□□ -0.24
CMTM3-213ENST00000566756 FAM167A-AS1Q96KT0 104 aa13.56□□□□□ -0.24
CMTM3-213ENST00000566756 DNAJC4Q9NNZ3 241 aa13.56□□□□□ -0.24
CMTM3-213ENST00000566756 CDC42EP3Q9UKI2 254 aa13.56□□□□□ -0.24
CMTM3-213ENST00000566756 A0A1B0GUS0 222 aa13.56□□□□□ -0.24
CMTM3-213ENST00000566756 SMIM27A0A1W2PRY6 76 aa13.56□□□□□ -0.24
CMTM3-213ENST00000566756 GRIFINA4D1Z8 144 aa13.56□□□□□ -0.24
CMTM3-213ENST00000566756 IGLV2-8P01709 118 aa13.56□□□□□ -0.24
CMTM3-213ENST00000566756 IER3P46695 156 aa13.56□□□□□ -0.24
CMTM3-213ENST00000566756 ZNF137PP52743 207 aa13.56□□□□□ -0.24
CMTM3-213ENST00000566756 OR5I1Q13606 314 aa13.56□□□□□ -0.24
CMTM3-213ENST00000566756 DMRTC2Q8IXT2 367 aaPredicted RBP13.56□□□□□ -0.24
CMTM3-213ENST00000566756 SERF1AO75920 110 aa13.55□□□□□ -0.24
CMTM3-213ENST00000566756 RASL11AQ6T310 242 aa13.55□□□□□ -0.24
CMTM3-213ENST00000566756 THAP8Q8NA92 274 aa13.55□□□□□ -0.24
CMTM3-213ENST00000566756 SLC25A2Q9BXI2 301 aa13.55□□□□□ -0.24
CMTM3-213ENST00000566756 ITPR1Q14643 2758 aa13.55□□□□□ -0.24
CMTM3-213ENST00000566756 CD3EP07766 207 aa13.54□□□□□ -0.24
CMTM3-213ENST00000566756 SUMO1P63165 101 aaKnown RBP13.54□□□□□ -0.24
CMTM3-213ENST00000566756 TMEM200BQ69YZ2 307 aa13.54□□□□□ -0.24
CMTM3-213ENST00000566756 TEX43Q6ZNM6 134 aa13.54□□□□□ -0.24
CMTM3-213ENST00000566756 OR5AU1Q8NGC0 362 aa13.54□□□□□ -0.24
CMTM3-213ENST00000566756 OR10W1Q8NGF6 305 aa13.54□□□□□ -0.24
CMTM3-213ENST00000566756 PPIAL4EA0A075B759 164 aa13.54□□□□□ -0.24
CMTM3-213ENST00000566756 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.54□□□□□ -0.24
CMTM3-213ENST00000566756 PPIAL4DF5H284 164 aa13.54□□□□□ -0.24
CMTM3-213ENST00000566756 TNFRSF13BO14836 293 aaPredicted RBP13.54□□□□□ -0.24
CMTM3-213ENST00000566756 HLA-DQA1P01909 254 aa13.54□□□□□ -0.24
CMTM3-213ENST00000566756 PPIAL4FP0DN26 164 aa13.54□□□□□ -0.24
CMTM3-213ENST00000566756 GATA2P23769 480 aaPredicted RBP13.54□□□□□ -0.24
CMTM3-213ENST00000566756 IBA57Q5T440 356 aaKnown RBP13.54□□□□□ -0.24
CMTM3-213ENST00000566756 TMEM136Q6ZRR5 245 aa13.54□□□□□ -0.24
CMTM3-213ENST00000566756 FAM231DQ6ZW35 169 aa13.54□□□□□ -0.24
CMTM3-213ENST00000566756 Q6ZWC4 215 aa13.54□□□□□ -0.24
CMTM3-213ENST00000566756 BAGE3Q86Y29 109 aa13.54□□□□□ -0.24
CMTM3-213ENST00000566756 BAGE2Q86Y30 109 aa13.54□□□□□ -0.24
CMTM3-213ENST00000566756 TBX15Q96SF7 602 aa13.54□□□□□ -0.24
CMTM3-213ENST00000566756 C20orf144Q9BQM9 153 aa13.54□□□□□ -0.24
CMTM3-213ENST00000566756 ZNF430Q9H8G1 570 aaPredicted RBP13.54□□□□□ -0.24
CMTM3-213ENST00000566756 DCAF16Q9NXF7 216 aa13.54□□□□□ -0.24
CMTM3-213ENST00000566756 PPIAL4AQ9Y536 164 aa13.54□□□□□ -0.24
CMTM3-213ENST00000566756 ROS1P08922 2347 aa13.53□□□□□ -0.24
CMTM3-213ENST00000566756 E7EQL1 145 aa13.53□□□□□ -0.24
CMTM3-213ENST00000566756 TMEM178BH3BS89 294 aa13.53□□□□□ -0.24
CMTM3-213ENST00000566756 AMY1AP04745 511 aa13.53□□□□□ -0.24
CMTM3-213ENST00000566756 BPIFB3P59826 476 aa13.53□□□□□ -0.24
CMTM3-213ENST00000566756 CCL8P80075 99 aa13.53□□□□□ -0.24
CMTM3-213ENST00000566756 ST6GALNAC6Q969X2 333 aa13.53□□□□□ -0.24
CMTM3-213ENST00000566756 ZNRD1Q9P1U0 126 aa13.53□□□□□ -0.24
CMTM3-213ENST00000566756 WASHC3Q9Y3C0 194 aa13.53□□□□□ -0.24
CMTM3-213ENST00000566756 TCRBV4S1A1TA0A5B7 111 aa13.52□□□□□ -0.24
CMTM3-213ENST00000566756 SNRPCP09234 159 aaKnown RBP13.52□□□□□ -0.24
CMTM3-213ENST00000566756 APOBEC3AP31941 199 aaPredicted RBP13.52□□□□□ -0.24
CMTM3-213ENST00000566756 BRS3P32247 399 aa13.52□□□□□ -0.24
CMTM3-213ENST00000566756 UBE2L3P68036 154 aaKnown RBP13.52□□□□□ -0.24
CMTM3-213ENST00000566756 USF2Q15853 346 aaPredicted RBP13.52□□□□□ -0.24
CMTM3-213ENST00000566756 MLANAQ16655 118 aa13.52□□□□□ -0.24
CMTM3-213ENST00000566756 TPTE2P1Q5T6R2 138 aa13.52□□□□□ -0.24
CMTM3-213ENST00000566756 LINC01560Q8TB33 94 aa13.52□□□□□ -0.24
CMTM3-213ENST00000566756 ANKHD1Q8IWZ3 2542 aaKnown RBP13.52□□□□□ -0.24
CMTM3-213ENST00000566756 HIVEP3Q5T1R4 2406 aa13.52□□□□□ -0.25
CMTM3-213ENST00000566756 ZNF705FA8MVS1 300 aaPredicted RBP13.52□□□□□ -0.25
CMTM3-213ENST00000566756 ZNF705DP0CH99 300 aaPredicted RBP13.52□□□□□ -0.25
CMTM3-213ENST00000566756 ZNF705BP0CI00 300 aaPredicted RBP13.52□□□□□ -0.25
CMTM3-213ENST00000566756 MC5RP33032 325 aa13.52□□□□□ -0.25
CMTM3-213ENST00000566756 LRRC10Q5BKY1 277 aa13.52□□□□□ -0.25
CMTM3-213ENST00000566756 WIPF2Q8TF74 440 aaPredicted RBP13.52□□□□□ -0.25
CMTM3-213ENST00000566756 CHRDL1Q9BU40 450 aa13.52□□□□□ -0.25
CMTM3-213ENST00000566756 RNASE7Q9H1E1 156 aaKnown RBP13.52□□□□□ -0.25
CMTM3-213ENST00000566756 NAT8BQ9UHF3 227 aa13.52□□□□□ -0.25
CMTM3-213ENST00000566756 IZUMO1RA6ND01 250 aa13.51□□□□□ -0.25
CMTM3-213ENST00000566756 CGB1A6NKQ9 187 aa13.51□□□□□ -0.25
CMTM3-213ENST00000566756 M0R143 59 aa13.51□□□□□ -0.25
CMTM3-213ENST00000566756 NDUFB3O43676 98 aa13.51□□□□□ -0.25
CMTM3-213ENST00000566756 COX7A2P2O60397 106 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms