RNA–Protein interactions for RNA: ENST00000566635.5

HERC2-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-208ENST00000566635 CACNG8Q8WXS5 425 aa13.93□□□□□ -0.18
HERC2-208ENST00000566635 MT-CO2P00403 227 aa13.92□□□□□ -0.18
HERC2-208ENST00000566635 BLCAPP62952 87 aa13.92□□□□□ -0.18
HERC2-208ENST00000566635 TTC9CQ8N5M4 171 aa13.92□□□□□ -0.18
HERC2-208ENST00000566635 ZNF709Q8N972 641 aa13.92□□□□□ -0.18
HERC2-208ENST00000566635 SMR3AQ99954 134 aa13.92□□□□□ -0.18
HERC2-208ENST00000566635 PFDN2Q9UHV9 154 aa13.92□□□□□ -0.18
HERC2-208ENST00000566635 UMAD1C9J7I0 102 aa13.91□□□□□ -0.18
HERC2-208ENST00000566635 G3V318 75 aa13.91□□□□□ -0.18
HERC2-208ENST00000566635 AGPAT2O15120 278 aa13.91□□□□□ -0.18
HERC2-208ENST00000566635 HOXA3O43365 443 aaPredicted RBP13.91□□□□□ -0.18
HERC2-208ENST00000566635 MPDU1O75352 247 aa13.91□□□□□ -0.18
HERC2-208ENST00000566635 FLI1Q01543 452 aaPredicted RBP13.91□□□□□ -0.18
HERC2-208ENST00000566635 ZNF616Q08AN1 781 aa13.91□□□□□ -0.18
HERC2-208ENST00000566635 UNQ5815/PRO19632Q6UWF5 114 aa13.91□□□□□ -0.18
HERC2-208ENST00000566635 Q6ZS46 218 aa13.91□□□□□ -0.18
HERC2-208ENST00000566635 TMEM144Q7Z5S9 345 aa13.91□□□□□ -0.18
HERC2-208ENST00000566635 TMUB1Q9BVT8 246 aa13.91□□□□□ -0.18
HERC2-208ENST00000566635 C17orf112F2Z3M2 114 aa13.91□□□□□ -0.18
HERC2-208ENST00000566635 CORTO00230 105 aa13.91□□□□□ -0.18
HERC2-208ENST00000566635 RAB5CP51148 216 aa13.91□□□□□ -0.18
HERC2-208ENST00000566635 RND2P52198 227 aa13.91□□□□□ -0.18
HERC2-208ENST00000566635 RAB2AP61019 212 aa13.91□□□□□ -0.18
HERC2-208ENST00000566635 DEFA5Q01523 94 aa13.91□□□□□ -0.18
HERC2-208ENST00000566635 FFAR4Q5NUL3 377 aa13.91□□□□□ -0.18
HERC2-208ENST00000566635 MIC13Q5XKP0 118 aa13.91□□□□□ -0.18
HERC2-208ENST00000566635 C16orf82Q7Z2V1 217 aa13.91□□□□□ -0.18
HERC2-208ENST00000566635 SAT2Q96F10 170 aaPredicted RBP13.91□□□□□ -0.18
HERC2-208ENST00000566635 FANCD2OSQ96PS1 177 aa13.91□□□□□ -0.18
HERC2-208ENST00000566635 RPRMQ9NS64 109 aa13.91□□□□□ -0.18
HERC2-208ENST00000566635 LINC00527Q9UJ94 153 aa13.91□□□□□ -0.18
HERC2-208ENST00000566635 I3L2K1 104 aa13.9□□□□□ -0.18
HERC2-208ENST00000566635 SRP14P37108 136 aaKnown RBP13.9□□□□□ -0.18
HERC2-208ENST00000566635 SERF2P84101 59 aa13.9□□□□□ -0.18
HERC2-208ENST00000566635 SIGLECL1Q8N7X8 197 aa13.9□□□□□ -0.18
HERC2-208ENST00000566635 OR5R1Q8NH85 324 aa13.9□□□□□ -0.18
HERC2-208ENST00000566635 NPIPB3Q92617 1050 aa13.9□□□□□ -0.18
HERC2-208ENST00000566635 HRH4Q9H3N8 390 aa13.9□□□□□ -0.18
HERC2-208ENST00000566635 VPREB3Q9UKI3 123 aa13.9□□□□□ -0.18
HERC2-208ENST00000566635 IGLV11-55A0A075B6I3 123 aa13.9□□□□□ -0.18
HERC2-208ENST00000566635 M0QZK8 103 aa13.9□□□□□ -0.18
HERC2-208ENST00000566635 CLRN3Q8NCR9 226 aa13.9□□□□□ -0.18
HERC2-208ENST00000566635 ZMAT5Q9UDW3 170 aaKnown RBP13.9□□□□□ -0.18
HERC2-208ENST00000566635 PXMP4Q9Y6I8 212 aa13.9□□□□□ -0.18
HERC2-208ENST00000566635 A0A1B0GV50 99 aa13.89□□□□□ -0.19
HERC2-208ENST00000566635 BTBD17A6NE02 478 aa13.89□□□□□ -0.19
HERC2-208ENST00000566635 K7EIM0 57 aa13.89□□□□□ -0.19
HERC2-208ENST00000566635 EIF3GO75821 320 aaKnown RBP eCLIP13.89□□□□□ -0.19
HERC2-208ENST00000566635 OR10J1P30954 320 aa13.89□□□□□ -0.19
HERC2-208ENST00000566635 BLOC1S1P78537 153 aa13.89□□□□□ -0.19
HERC2-208ENST00000566635 TMEM41BQ5BJD5 291 aa13.89□□□□□ -0.19
HERC2-208ENST00000566635 TEX29Q8N6K0 151 aa13.89□□□□□ -0.19
HERC2-208ENST00000566635 FAM110DQ8TAY7 271 aaPredicted RBP13.89□□□□□ -0.19
HERC2-208ENST00000566635 PRDM13Q9H4Q3 707 aa13.89□□□□□ -0.19
HERC2-208ENST00000566635 DNASE2O00115 360 aaPredicted RBP13.88□□□□□ -0.19
HERC2-208ENST00000566635 GCSAMLQ5JQS6 135 aa13.88□□□□□ -0.19
HERC2-208ENST00000566635 ETFRF1Q6IPR1 90 aa13.88□□□□□ -0.19
HERC2-208ENST00000566635 SSX7Q7RTT5 188 aa13.88□□□□□ -0.19
HERC2-208ENST00000566635 OR1L6Q8NGR2 347 aa13.88□□□□□ -0.19
HERC2-208ENST00000566635 DUX5Q96PT3 197 aa13.88□□□□□ -0.19
HERC2-208ENST00000566635 S4R3C0 116 aa13.88□□□□□ -0.19
HERC2-208ENST00000566635 FLNBO75369 2602 aaKnown RBP13.88□□□□□ -0.19
HERC2-208ENST00000566635 IGKV1D-37A0A075B6S9 117 aa13.88□□□□□ -0.19
HERC2-208ENST00000566635 YIF1AO95070 293 aa13.88□□□□□ -0.19
HERC2-208ENST00000566635 IGHG2P01859 326 aa13.88□□□□□ -0.19
HERC2-208ENST00000566635 GATA2P23769 480 aaPredicted RBP13.88□□□□□ -0.19
HERC2-208ENST00000566635 ZNF726P1Q15940 193 aa13.88□□□□□ -0.19
HERC2-208ENST00000566635 SLC35E3Q7Z769 313 aa13.88□□□□□ -0.19
HERC2-208ENST00000566635 STPG3Q8N7X2 389 aa13.88□□□□□ -0.19
HERC2-208ENST00000566635 GSX1Q9H4S2 264 aaPredicted RBP13.88□□□□□ -0.19
HERC2-208ENST00000566635 H2AFB1P0C5Y9 115 aa13.87□□□□□ -0.19
HERC2-208ENST00000566635 BPIFCQ8NFQ6 507 aa13.87□□□□□ -0.19
HERC2-208ENST00000566635 SLC45A2Q9UMX9 530 aa13.87□□□□□ -0.19
HERC2-208ENST00000566635 TRAV41A0A0B4J266 112 aa13.87□□□□□ -0.19
HERC2-208ENST00000566635 SOX15O60248 233 aa13.87□□□□□ -0.19
HERC2-208ENST00000566635 OR2J3O76001 311 aa13.87□□□□□ -0.19
HERC2-208ENST00000566635 S100A12P80511 92 aa13.87□□□□□ -0.19
HERC2-208ENST00000566635 RAB31Q13636 194 aa13.87□□□□□ -0.19
HERC2-208ENST00000566635 AKIRIN2Q53H80 203 aa13.87□□□□□ -0.19
HERC2-208ENST00000566635 C19orf54Q5BKX5 351 aa13.87□□□□□ -0.19
HERC2-208ENST00000566635 LURAP1LQ8IV03 231 aa13.87□□□□□ -0.19
HERC2-208ENST00000566635 RPP25LQ8N5L8 163 aaKnown RBP13.87□□□□□ -0.19
HERC2-208ENST00000566635 THAP8Q8NA92 274 aa13.87□□□□□ -0.19
HERC2-208ENST00000566635 RCC1LQ96I51 464 aaKnown RBP13.87□□□□□ -0.19
HERC2-208ENST00000566635 NOL4LQ96MY1 436 aaPredicted RBP13.87□□□□□ -0.19
HERC2-208ENST00000566635 CUBNO60494 3623 aa13.87□□□□□ -0.19
HERC2-208ENST00000566635 TSPAN15O95858 294 aa13.86□□□□□ -0.19
HERC2-208ENST00000566635 CRIP2P52943 208 aaPredicted RBP13.86□□□□□ -0.19
HERC2-208ENST00000566635 PRR20EP86478 221 aa13.86□□□□□ -0.19
HERC2-208ENST00000566635 PRR20CP86479 221 aa13.86□□□□□ -0.19
HERC2-208ENST00000566635 PRR20DP86480 221 aa13.86□□□□□ -0.19
HERC2-208ENST00000566635 PRR20BP86481 221 aa13.86□□□□□ -0.19
HERC2-208ENST00000566635 PRR20AP86496 221 aa13.86□□□□□ -0.19
HERC2-208ENST00000566635 ZNF90Q03938 601 aa13.86□□□□□ -0.19
HERC2-208ENST00000566635 TMEM95Q3KNT9 176 aa13.86□□□□□ -0.19
HERC2-208ENST00000566635 DPPA3Q6W0C5 159 aa13.86□□□□□ -0.19
HERC2-208ENST00000566635 TMEM116Q8NCL8 245 aa13.86□□□□□ -0.19
HERC2-208ENST00000566635 ZNF98A6NK75 572 aa13.85□□□□□ -0.19
HERC2-208ENST00000566635 ZFP92A6NM28 416 aa13.85□□□□□ -0.19
HERC2-208ENST00000566635 NDUFB8O95169 186 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms