RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 SRP19P09132 144 aaKnown RBP9.95□□□□□ -0.82
SF3B3-206ENST00000565990 EGR2P11161 476 aaPredicted RBP9.95□□□□□ -0.82
SF3B3-206ENST00000565990 RAB5AP20339 215 aa9.95□□□□□ -0.82
SF3B3-206ENST00000565990 G6PCP35575 357 aa9.95□□□□□ -0.82
SF3B3-206ENST00000565990 COMPP49747 757 aaPredicted RBP9.95□□□□□ -0.82
SF3B3-206ENST00000565990 CRIP2P52943 208 aaPredicted RBP9.95□□□□□ -0.82
SF3B3-206ENST00000565990 CX3CL1P78423 397 aa9.95□□□□□ -0.82
SF3B3-206ENST00000565990 CXorf66Q5JRM2 361 aaPredicted RBP9.95□□□□□ -0.82
SF3B3-206ENST00000565990 CENPVQ7Z7K6 275 aaPredicted RBP9.95□□□□□ -0.82
SF3B3-206ENST00000565990 MMD2Q8IY49 270 aa9.95□□□□□ -0.82
SF3B3-206ENST00000565990 OR4F5Q8NH21 305 aa9.95□□□□□ -0.82
SF3B3-206ENST00000565990 SCGB1C1Q8TD33 95 aa9.95□□□□□ -0.82
SF3B3-206ENST00000565990 CLCC1Q96S66 551 aa9.95□□□□□ -0.82
SF3B3-206ENST00000565990 HSPB9Q9BQS6 159 aa9.95□□□□□ -0.82
SF3B3-206ENST00000565990 WNT10AQ9GZT5 417 aa9.95□□□□□ -0.82
SF3B3-206ENST00000565990 ZNF430Q9H8G1 570 aaPredicted RBP9.95□□□□□ -0.82
SF3B3-206ENST00000565990 TPSG1Q9NRR2 321 aa9.95□□□□□ -0.82
SF3B3-206ENST00000565990 TMEM140Q9NV12 185 aa9.95□□□□□ -0.82
SF3B3-206ENST00000565990 CLPSL1A2RUU4 121 aa9.94□□□□□ -0.82
SF3B3-206ENST00000565990 FOXL1Q12952 345 aa9.94□□□□□ -0.82
SF3B3-206ENST00000565990 KRTAP21-3Q3LHN1 58 aa9.94□□□□□ -0.82
SF3B3-206ENST00000565990 OR2T6Q8NHC8 308 aa9.94□□□□□ -0.82
SF3B3-206ENST00000565990 WIPF2Q8TF74 440 aaPredicted RBP9.94□□□□□ -0.82
SF3B3-206ENST00000565990 TMEM158Q8WZ71 300 aa9.94□□□□□ -0.82
SF3B3-206ENST00000565990 TVP23CQ96ET8 276 aa9.94□□□□□ -0.82
SF3B3-206ENST00000565990 YPEL4Q96NS1 127 aa9.94□□□□□ -0.82
SF3B3-206ENST00000565990 C12orf57Q99622 126 aa9.94□□□□□ -0.82
SF3B3-206ENST00000565990 TRAV3A0A0B4J244 114 aa9.93□□□□□ -0.82
SF3B3-206ENST00000565990 LOC102723971A0A1B0GUV8 181 aa9.93□□□□□ -0.82
SF3B3-206ENST00000565990 CA2P00918 260 aa9.93□□□□□ -0.82
SF3B3-206ENST00000565990 MBP02144 154 aa9.93□□□□□ -0.82
SF3B3-206ENST00000565990 OR9G9P0C7N8 305 aa9.93□□□□□ -0.82
SF3B3-206ENST00000565990 AKR1D1P51857 326 aa9.93□□□□□ -0.82
SF3B3-206ENST00000565990 PROK1P58294 105 aa9.93□□□□□ -0.82
SF3B3-206ENST00000565990 ERVK-16P61578 105 aa9.93□□□□□ -0.82
SF3B3-206ENST00000565990 CTAG1AP78358 180 aa9.93□□□□□ -0.82
SF3B3-206ENST00000565990 FXYD3Q14802 87 aa9.93□□□□□ -0.82
SF3B3-206ENST00000565990 PLGLAQ15195 96 aa9.93□□□□□ -0.82
SF3B3-206ENST00000565990 AARDQ4LEZ3 155 aa9.93□□□□□ -0.82
SF3B3-206ENST00000565990 AKIRIN2Q53H80 203 aa9.93□□□□□ -0.82
SF3B3-206ENST00000565990 Q6ZRM9 215 aa9.93□□□□□ -0.82
SF3B3-206ENST00000565990 SSX9Q7RTT3 188 aa9.93□□□□□ -0.82
SF3B3-206ENST00000565990 H2BFWTQ7Z2G1 175 aa9.93□□□□□ -0.82
SF3B3-206ENST00000565990 RNASE11Q8TAA1 199 aaKnown RBP9.93□□□□□ -0.82
SF3B3-206ENST00000565990 CIB3Q96Q77 187 aaPredicted RBP9.93□□□□□ -0.82
SF3B3-206ENST00000565990 NIPSNAP3BQ9BS92 247 aa9.93□□□□□ -0.82
SF3B3-206ENST00000565990 FBXO7Q9Y3I1 522 aa9.93□□□□□ -0.82
SF3B3-206ENST00000565990 AP4M1O00189 453 aa9.92□□□□□ -0.82
SF3B3-206ENST00000565990 OR2C1O95371 312 aa9.92□□□□□ -0.82
SF3B3-206ENST00000565990 TMEM50AO95807 157 aa9.92□□□□□ -0.82
SF3B3-206ENST00000565990 RPL8P62917 257 aaKnown RBP9.92□□□□□ -0.82
SF3B3-206ENST00000565990 ICAM4Q14773 271 aa9.92□□□□□ -0.82
SF3B3-206ENST00000565990 C19orf54Q5BKX5 351 aa9.92□□□□□ -0.82
SF3B3-206ENST00000565990 C9orf152Q5JTZ5 239 aa9.92□□□□□ -0.82
SF3B3-206ENST00000565990 SLC25A24Q6NUK1 477 aa9.92□□□□□ -0.82
SF3B3-206ENST00000565990 ZNF429Q86V71 674 aa9.92□□□□□ -0.82
SF3B3-206ENST00000565990 SGMS2Q8NHU3 365 aa9.92□□□□□ -0.82
SF3B3-206ENST00000565990 C19orf24Q9BVV8 132 aa9.92□□□□□ -0.82
SF3B3-206ENST00000565990 CTDSP1Q9GZU7 261 aa9.92□□□□□ -0.82
SF3B3-206ENST00000565990 TMEM14BQ9NUH8 114 aa9.92□□□□□ -0.82
SF3B3-206ENST00000565990 PSENENQ9NZ42 101 aa9.92□□□□□ -0.82
SF3B3-206ENST00000565990 A0A0G2JRQ6 117 aa9.91□□□□□ -0.82
SF3B3-206ENST00000565990 TEX50A0A1B0GTY4 177 aa9.91□□□□□ -0.82
SF3B3-206ENST00000565990 CGB1A6NKQ9 187 aa9.91□□□□□ -0.82
SF3B3-206ENST00000565990 E7EUB6 86 aa9.91□□□□□ -0.82
SF3B3-206ENST00000565990 H3BQ15 152 aa9.91□□□□□ -0.82
SF3B3-206ENST00000565990 MDKP21741 143 aaPredicted RBP9.91□□□□□ -0.82
SF3B3-206ENST00000565990 RPL35P42766 123 aaKnown RBP9.91□□□□□ -0.82
SF3B3-206ENST00000565990 FHITP49789 147 aa9.91□□□□□ -0.82
SF3B3-206ENST00000565990 NDPQ00604 133 aa9.91□□□□□ -0.82
SF3B3-206ENST00000565990 CFHR3Q02985 330 aa9.91□□□□□ -0.82
SF3B3-206ENST00000565990 TMEM41BQ5BJD5 291 aa9.91□□□□□ -0.82
SF3B3-206ENST00000565990 DNLZQ5SXM8 178 aa9.91□□□□□ -0.82
SF3B3-206ENST00000565990 TMEM14EPQ6UXP3 125 aa9.91□□□□□ -0.82
SF3B3-206ENST00000565990 TMEM68Q96MH6 324 aa9.91□□□□□ -0.82
SF3B3-206ENST00000565990 FKBP11Q9NYL4 201 aa9.91□□□□□ -0.82
SF3B3-206ENST00000565990 HSPB7Q9UBY9 170 aa9.91□□□□□ -0.82
SF3B3-206ENST00000565990 CACNG5Q9UF02 275 aa9.91□□□□□ -0.82
SF3B3-206ENST00000565990 PRNDQ9UKY0 176 aa9.91□□□□□ -0.82
SF3B3-206ENST00000565990 ZNF257Q9Y2Q1 563 aa9.91□□□□□ -0.82
SF3B3-206ENST00000565990 RNF114Q9Y508 228 aa9.91□□□□□ -0.82
SF3B3-206ENST00000565990 TENM1Q9UKZ4 2725 aa9.91□□□□□ -0.82
SF3B3-206ENST00000565990 ATP6V0E1O15342 81 aa9.9□□□□□ -0.82
SF3B3-206ENST00000565990 CST7O76096 145 aa9.9□□□□□ -0.82
SF3B3-206ENST00000565990 ACTL6BO94805 426 aa9.9□□□□□ -0.82
SF3B3-206ENST00000565990 CNIH1O95406 144 aa9.9□□□□□ -0.82
SF3B3-206ENST00000565990 BRI3O95415 125 aa9.9□□□□□ -0.82
SF3B3-206ENST00000565990 BCL2P10415 239 aa9.9□□□□□ -0.82
SF3B3-206ENST00000565990 PPIFP30405 207 aaKnown RBP9.9□□□□□ -0.82
SF3B3-206ENST00000565990 VDAC2P45880 294 aaPredicted RBP9.9□□□□□ -0.82
SF3B3-206ENST00000565990 RND2P52198 227 aa9.9□□□□□ -0.82
SF3B3-206ENST00000565990 OR2B8PP59922 312 aa9.9□□□□□ -0.82
SF3B3-206ENST00000565990 CD81P60033 236 aa9.9□□□□□ -0.82
SF3B3-206ENST00000565990 B2MP61769 119 aa9.9□□□□□ -0.82
SF3B3-206ENST00000565990 TNXAQ16473 311 aa9.9□□□□□ -0.82
SF3B3-206ENST00000565990 PDLIM3Q53GG5 364 aaPredicted RBP9.9□□□□□ -0.82
SF3B3-206ENST00000565990 OR4A16Q8NH70 328 aa9.9□□□□□ -0.82
SF3B3-206ENST00000565990 SRSF12Q8WXF0 261 aaKnown RBP9.9□□□□□ -0.82
SF3B3-206ENST00000565990 ARPC1AQ92747 370 aa9.9□□□□□ -0.82
SF3B3-206ENST00000565990 NOL4LQ96MY1 436 aaPredicted RBP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms