RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 ZNF266Q14584 549 aa8.67□□□□□ -1.02
SF3B3-205ENST00000564899 RPL7L1Q6DKI1 246 aaKnown RBP8.67□□□□□ -1.02
SF3B3-205ENST00000564899 Q6ZSV7 163 aa8.67□□□□□ -1.02
SF3B3-205ENST00000564899 SLC51BQ86UW2 128 aa8.67□□□□□ -1.02
SF3B3-205ENST00000564899 SLC35E1Q96K37 410 aa8.67□□□□□ -1.02
SF3B3-205ENST00000564899 FANCD2OSQ96PS1 177 aa8.67□□□□□ -1.02
SF3B3-205ENST00000564899 ZNF355PQ9NSJ1 428 aa8.67□□□□□ -1.02
SF3B3-205ENST00000564899 IGHV3-21A0A0B4J1V1 117 aa8.66□□□□□ -1.02
SF3B3-205ENST00000564899 SOX15O60248 233 aa8.66□□□□□ -1.02
SF3B3-205ENST00000564899 OR2J3O76001 311 aa8.66□□□□□ -1.02
SF3B3-205ENST00000564899 JTBO76095 146 aa8.66□□□□□ -1.02
SF3B3-205ENST00000564899 PPIFP30405 207 aaKnown RBP8.66□□□□□ -1.02
SF3B3-205ENST00000564899 GPX4P36969 197 aaPredicted RBP8.66□□□□□ -1.02
SF3B3-205ENST00000564899 EIF5AP63241 154 aaKnown RBP8.66□□□□□ -1.02
SF3B3-205ENST00000564899 CFHR3Q02985 330 aa8.66□□□□□ -1.02
SF3B3-205ENST00000564899 AKR1C1Q04828 323 aa8.66□□□□□ -1.02
SF3B3-205ENST00000564899 VWC2Q2TAL6 325 aa8.66□□□□□ -1.02
SF3B3-205ENST00000564899 ETFRF1Q6IPR1 90 aa8.66□□□□□ -1.02
SF3B3-205ENST00000564899 OR2T6Q8NHC8 308 aa8.66□□□□□ -1.02
SF3B3-205ENST00000564899 CACNG8Q8WXS5 425 aa8.66□□□□□ -1.02
SF3B3-205ENST00000564899 GON7Q9BXV9 100 aa8.66□□□□□ -1.02
SF3B3-205ENST00000564899 FNDC4Q9H6D8 234 aaPredicted RBP8.66□□□□□ -1.02
SF3B3-205ENST00000564899 THYN1Q9P016 225 aa8.66□□□□□ -1.02
SF3B3-205ENST00000564899 FNDC10F2Z333 226 aa8.65□□□□□ -1.02
SF3B3-205ENST00000564899 H3BUA1 57 aa8.65□□□□□ -1.02
SF3B3-205ENST00000564899 I3L2K1 104 aa8.65□□□□□ -1.02
SF3B3-205ENST00000564899 K7EIM0 57 aa8.65□□□□□ -1.02
SF3B3-205ENST00000564899 NDUFB8O95169 186 aa8.65□□□□□ -1.02
SF3B3-205ENST00000564899 IGHV3-48P01763 117 aa8.65□□□□□ -1.02
SF3B3-205ENST00000564899 TPT1P13693 172 aaKnown RBP8.65□□□□□ -1.02
SF3B3-205ENST00000564899 SLC35B1P78383 322 aa8.65□□□□□ -1.02
SF3B3-205ENST00000564899 RHOGP84095 191 aa8.65□□□□□ -1.02
SF3B3-205ENST00000564899 DEFA5Q01523 94 aa8.65□□□□□ -1.02
SF3B3-205ENST00000564899 GAMTQ14353 236 aa8.65□□□□□ -1.02
SF3B3-205ENST00000564899 MLANAQ16655 118 aa8.65□□□□□ -1.02
SF3B3-205ENST00000564899 KLK9Q2XQG4 91 aa8.65□□□□□ -1.02
SF3B3-205ENST00000564899 HIST2H2BDQ6DRA6 164 aa8.65□□□□□ -1.02
SF3B3-205ENST00000564899 TREML4Q6UXN2 200 aa8.65□□□□□ -1.02
SF3B3-205ENST00000564899 UBAC2Q8NBM4 344 aa8.65□□□□□ -1.02
SF3B3-205ENST00000564899 STOML3Q8TAV4 291 aa8.65□□□□□ -1.02
SF3B3-205ENST00000564899 SCGB1C1Q8TD33 95 aa8.65□□□□□ -1.02
SF3B3-205ENST00000564899 ACY3Q96HD9 319 aa8.65□□□□□ -1.02
SF3B3-205ENST00000564899 MS4A10Q96PG2 267 aa8.65□□□□□ -1.02
SF3B3-205ENST00000564899 ZNF747Q9BV97 191 aa8.65□□□□□ -1.02
SF3B3-205ENST00000564899 FBXL7Q9UJT9 491 aa8.65□□□□□ -1.02
SF3B3-205ENST00000564899 KLK9Q9UKQ9 250 aa8.65□□□□□ -1.02
SF3B3-205ENST00000564899 TRBV9A0A0B4J1U6 114 aa8.64□□□□□ -1.03
SF3B3-205ENST00000564899 PSMB11A5LHX3 300 aa8.64□□□□□ -1.03
SF3B3-205ENST00000564899 TRGV3P03979 118 aa8.64□□□□□ -1.03
SF3B3-205ENST00000564899 PF4V1P10720 104 aa8.64□□□□□ -1.03
SF3B3-205ENST00000564899 FGF7P21781 194 aa8.64□□□□□ -1.03
SF3B3-205ENST00000564899 RND2P52198 227 aa8.64□□□□□ -1.03
SF3B3-205ENST00000564899 ACSM6Q6P461 480 aa8.64□□□□□ -1.03
SF3B3-205ENST00000564899 ZNF329Q86UD4 541 aa8.64□□□□□ -1.03
SF3B3-205ENST00000564899 BAP18Q8IXM2 172 aa8.64□□□□□ -1.03
SF3B3-205ENST00000564899 HSD17B11Q8NBQ5 300 aa8.64□□□□□ -1.03
SF3B3-205ENST00000564899 NECAP1Q8NC96 275 aa8.64□□□□□ -1.03
SF3B3-205ENST00000564899 ST8SIA2Q92186 375 aa8.64□□□□□ -1.03
SF3B3-205ENST00000564899 PARD6GQ9BYG4 376 aaPredicted RBP8.64□□□□□ -1.03
SF3B3-205ENST00000564899 WDR61Q9GZS3 305 aaKnown RBP8.64□□□□□ -1.03
SF3B3-205ENST00000564899 NPVFQ9HCQ7 196 aa8.64□□□□□ -1.03
SF3B3-205ENST00000564899 SERTAD4Q9NUC0 356 aa8.64□□□□□ -1.03
SF3B3-205ENST00000564899 MRPL36Q9P0J6 103 aaKnown RBP8.64□□□□□ -1.03
SF3B3-205ENST00000564899 WDR83OSQ9Y284 106 aa8.64□□□□□ -1.03
SF3B3-205ENST00000564899 MFSD2BA6NFX1 497 aa8.63□□□□□ -1.03
SF3B3-205ENST00000564899 FAM223BA6NKX1 122 aa8.63□□□□□ -1.03
SF3B3-205ENST00000564899 BRI3O95415 125 aa8.63□□□□□ -1.03
SF3B3-205ENST00000564899 IGLV1-40P01703 118 aa8.63□□□□□ -1.03
SF3B3-205ENST00000564899 IGHG4P01861 327 aa8.63□□□□□ -1.03
SF3B3-205ENST00000564899 TPPP2P59282 170 aa8.63□□□□□ -1.03
SF3B3-205ENST00000564899 C15orf32Q32M92 178 aa8.63□□□□□ -1.03
SF3B3-205ENST00000564899 BTNL8Q6UX41 500 aa8.63□□□□□ -1.03
SF3B3-205ENST00000564899 TMEM144Q7Z5S9 345 aa8.63□□□□□ -1.03
SF3B3-205ENST00000564899 FAM223AQ8IWN6 122 aa8.63□□□□□ -1.03
SF3B3-205ENST00000564899 VN1R17PQ8TDU5 208 aa8.63□□□□□ -1.03
SF3B3-205ENST00000564899 SCARB1Q8WTV0 552 aa8.63□□□□□ -1.03
SF3B3-205ENST00000564899 NPIPB3Q92617 1050 aa8.63□□□□□ -1.03
SF3B3-205ENST00000564899 GINS3Q9BRX5 216 aa8.63□□□□□ -1.03
SF3B3-205ENST00000564899 ARV1Q9H2C2 271 aa8.63□□□□□ -1.03
SF3B3-205ENST00000564899 C16orf95Q9H693 158 aa8.63□□□□□ -1.03
SF3B3-205ENST00000564899 SLA2Q9H6Q3 261 aa8.63□□□□□ -1.03
SF3B3-205ENST00000564899 C21orf62Q9NYP8 219 aa8.63□□□□□ -1.03
SF3B3-205ENST00000564899 S4R3C0 116 aa8.63□□□□□ -1.03
SF3B3-205ENST00000564899 MPDU1O75352 247 aa8.62□□□□□ -1.03
SF3B3-205ENST00000564899 NDUFA7O95182 113 aa8.62□□□□□ -1.03
SF3B3-205ENST00000564899 IGHV3-23P01764 117 aa8.62□□□□□ -1.03
SF3B3-205ENST00000564899 MDKP21741 143 aaPredicted RBP8.62□□□□□ -1.03
SF3B3-205ENST00000564899 ATP6V0CP27449 155 aa8.62□□□□□ -1.03
SF3B3-205ENST00000564899 MFAP4P55083 255 aa8.62□□□□□ -1.03
SF3B3-205ENST00000564899 RUNX1Q01196 453 aa8.62□□□□□ -1.03
SF3B3-205ENST00000564899 ATP5G2Q06055 141 aa8.62□□□□□ -1.03
SF3B3-205ENST00000564899 TEX38Q6PEX7 206 aa8.62□□□□□ -1.03
SF3B3-205ENST00000564899 TEPPQ6URK8 271 aa8.62□□□□□ -1.03
SF3B3-205ENST00000564899 SHISA2Q6UWI4 295 aa8.62□□□□□ -1.03
SF3B3-205ENST00000564899 C10orf99Q6UWK7 81 aa8.62□□□□□ -1.03
SF3B3-205ENST00000564899 CENPVQ7Z7K6 275 aaPredicted RBP8.62□□□□□ -1.03
SF3B3-205ENST00000564899 TMEM116Q8NCL8 245 aa8.62□□□□□ -1.03
SF3B3-205ENST00000564899 OR4X1Q8NH49 305 aa8.62□□□□□ -1.03
SF3B3-205ENST00000564899 EEF1AKMT3Q96AZ1 226 aa8.62□□□□□ -1.03
SF3B3-205ENST00000564899 GNPNAT1Q96EK6 184 aaPredicted RBP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms