RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 DNPH1O43598 174 aa13.34□□□□□ -0.27
LINC00554-201ENST00000564841 GFRA3O60609 400 aa13.34□□□□□ -0.27
LINC00554-201ENST00000564841 SSX8Q7RTT4 187 aa13.34□□□□□ -0.27
LINC00554-201ENST00000564841 NUP35Q8NFH5 326 aa13.34□□□□□ -0.27
LINC00554-201ENST00000564841 TLN1Q9Y490 2541 aaKnown RBP13.34□□□□□ -0.27
LINC00554-201ENST00000564841 FAM231BA6NCW3 169 aa13.34□□□□□ -0.27
LINC00554-201ENST00000564841 IZUMO1RA6ND01 250 aa13.34□□□□□ -0.27
LINC00554-201ENST00000564841 PRSS47A8MTI9 375 aa13.34□□□□□ -0.27
LINC00554-201ENST00000564841 PROP1O75360 226 aa13.34□□□□□ -0.27
LINC00554-201ENST00000564841 ARR3P36575 388 aa13.34□□□□□ -0.27
LINC00554-201ENST00000564841 FER1L6-AS1Q8NA97 138 aa13.34□□□□□ -0.27
LINC00554-201ENST00000564841 MDS2Q8NDY4 140 aa13.34□□□□□ -0.27
LINC00554-201ENST00000564841 HINT2Q9BX68 163 aa13.34□□□□□ -0.27
LINC00554-201ENST00000564841 NBEAP1P0C6P0 100 aa13.34□□□□□ -0.27
LINC00554-201ENST00000564841 IGLC1P0CG04 106 aa13.34□□□□□ -0.27
LINC00554-201ENST00000564841 FOXF2Q12947 444 aa13.34□□□□□ -0.27
LINC00554-201ENST00000564841 CNEP1R1Q8N9A8 125 aa13.34□□□□□ -0.27
LINC00554-201ENST00000564841 NCOR1P1Q9H4R4 102 aa13.34□□□□□ -0.27
LINC00554-201ENST00000564841 DYSFO75923 2080 aa13.34□□□□□ -0.27
LINC00554-201ENST00000564841 TNRC6AQ8NDV7 1962 aaKnown RBP13.33□□□□□ -0.28
LINC00554-201ENST00000564841 MLANAQ16655 118 aa13.33□□□□□ -0.28
LINC00554-201ENST00000564841 PRSS33Q8NF86 280 aa13.33□□□□□ -0.28
LINC00554-201ENST00000564841 KCNIP1Q9NZI2 227 aa13.33□□□□□ -0.28
LINC00554-201ENST00000564841 ADGRG4Q8IZF6 3080 aa13.33□□□□□ -0.28
LINC00554-201ENST00000564841 ISLRO14498 428 aa13.33□□□□□ -0.28
LINC00554-201ENST00000564841 PLP2Q04941 152 aa13.33□□□□□ -0.28
LINC00554-201ENST00000564841 FAM71F2Q6NXP2 309 aa13.33□□□□□ -0.28
LINC00554-201ENST00000564841 OR1N2Q8NGR9 330 aa13.33□□□□□ -0.28
LINC00554-201ENST00000564841 OR4A16Q8NH70 328 aa13.33□□□□□ -0.28
LINC00554-201ENST00000564841 SMIM12Q96EX1 92 aa13.33□□□□□ -0.28
LINC00554-201ENST00000564841 LSM4Q9Y4Z0 139 aaKnown RBP13.33□□□□□ -0.28
LINC00554-201ENST00000564841 RELNP78509 3460 aa13.33□□□□□ -0.28
LINC00554-201ENST00000564841 CHD8Q9HCK8 2581 aa13.33□□□□□ -0.28
LINC00554-201ENST00000564841 TRAV5A0A0B4J249 113 aa13.32□□□□□ -0.28
LINC00554-201ENST00000564841 C7orf71A4D174 169 aa13.32□□□□□ -0.28
LINC00554-201ENST00000564841 GAGE10A6NGK3 116 aa13.32□□□□□ -0.28
LINC00554-201ENST00000564841 LINC00596Q86U02 117 aa13.32□□□□□ -0.28
LINC00554-201ENST00000564841 MDP1Q86V88 176 aa13.32□□□□□ -0.28
LINC00554-201ENST00000564841 NINJ1Q92982 152 aa13.32□□□□□ -0.28
LINC00554-201ENST00000564841 LY96Q9Y6Y9 160 aa13.32□□□□□ -0.28
LINC00554-201ENST00000564841 SYS1-DBNDD2H3BUS1 97 aa13.32□□□□□ -0.28
LINC00554-201ENST00000564841 GNG7O60262 68 aa13.32□□□□□ -0.28
LINC00554-201ENST00000564841 AREGP15514 252 aa13.32□□□□□ -0.28
LINC00554-201ENST00000564841 VDAC2P45880 294 aaPredicted RBP13.32□□□□□ -0.28
LINC00554-201ENST00000564841 MORN5Q5VZ52 161 aa13.32□□□□□ -0.28
LINC00554-201ENST00000564841 MOB1BQ7L9L4 216 aa13.32□□□□□ -0.28
LINC00554-201ENST00000564841 NPVFQ9HCQ7 196 aa13.32□□□□□ -0.28
LINC00554-201ENST00000564841 METRNQ9UJH8 293 aa13.32□□□□□ -0.28
LINC00554-201ENST00000564841 MRPL49Q13405 166 aaKnown RBP13.31□□□□□ -0.28
LINC00554-201ENST00000564841 TRIB1Q96RU8 372 aa13.31□□□□□ -0.28
LINC00554-201ENST00000564841 JMJD8Q96S16 334 aa13.31□□□□□ -0.28
LINC00554-201ENST00000564841 PLEKHA3Q9HB20 300 aa13.31□□□□□ -0.28
LINC00554-201ENST00000564841 ZNF835Q9Y2P0 537 aa13.31□□□□□ -0.28
LINC00554-201ENST00000564841 J3QT63 122 aa13.31□□□□□ -0.28
LINC00554-201ENST00000564841 MPDU1O75352 247 aa13.31□□□□□ -0.28
LINC00554-201ENST00000564841 LYZL6O75951 148 aa13.31□□□□□ -0.28
LINC00554-201ENST00000564841 UTF1Q5T230 341 aa13.31□□□□□ -0.28
LINC00554-201ENST00000564841 TEPPQ6URK8 271 aa13.31□□□□□ -0.28
LINC00554-201ENST00000564841 TMEM178AQ8NBL3 297 aa13.31□□□□□ -0.28
LINC00554-201ENST00000564841 SNRNP40Q96DI7 357 aaKnown RBP13.31□□□□□ -0.28
LINC00554-201ENST00000564841 RPL39P5Q59GN2 51 aa13.31□□□□□ -0.28
LINC00554-201ENST00000564841 C16orf54Q6UWD8 224 aa13.31□□□□□ -0.28
LINC00554-201ENST00000564841 HILPDAQ9Y5L2 63 aa13.31□□□□□ -0.28
LINC00554-201ENST00000564841 ATRXP46100 2492 aa13.3□□□□□ -0.28
LINC00554-201ENST00000564841 IGHV1-24A0A0C4DH33 117 aa13.3□□□□□ -0.28
LINC00554-201ENST00000564841 HSBP1L1C9JCN9 74 aa13.3□□□□□ -0.28
LINC00554-201ENST00000564841 MT-CO2P00403 227 aa13.3□□□□□ -0.28
LINC00554-201ENST00000564841 APOA2P02652 100 aa13.3□□□□□ -0.28
LINC00554-201ENST00000564841 ZNF137PP52743 207 aa13.3□□□□□ -0.28
LINC00554-201ENST00000564841 TCF24Q7RTU0 167 aa13.3□□□□□ -0.28
LINC00554-201ENST00000564841 IGF2BP2-AS1Q96M15 143 aa13.3□□□□□ -0.28
LINC00554-201ENST00000564841 COMMD5Q9GZQ3 224 aa13.3□□□□□ -0.28
LINC00554-201ENST00000564841 SAP30LQ9HAJ7 183 aa13.3□□□□□ -0.28
LINC00554-201ENST00000564841 NCOR2Q9Y618 2525 aa13.3□□□□□ -0.28
LINC00554-201ENST00000564841 HIGD1CA8MV81 97 aa13.3□□□□□ -0.28
LINC00554-201ENST00000564841 KLK10O43240 276 aa13.3□□□□□ -0.28
LINC00554-201ENST00000564841 AGFG2O95081 481 aa13.3□□□□□ -0.28
LINC00554-201ENST00000564841 OR13A1Q8NGR1 328 aa13.3□□□□□ -0.28
LINC00554-201ENST00000564841 NABP2Q9BQ15 211 aa13.3□□□□□ -0.28
LINC00554-201ENST00000564841 ST20Q9HBF5 79 aa13.3□□□□□ -0.28
LINC00554-201ENST00000564841 ZGRF1Q86YA3 2104 aa13.29□□□□□ -0.28
LINC00554-201ENST00000564841 ZNF207O43670 478 aaKnown RBP13.29□□□□□ -0.28
LINC00554-201ENST00000564841 HAND1O96004 215 aa13.29□□□□□ -0.28
LINC00554-201ENST00000564841 SMIM21Q3B7S5 101 aa13.29□□□□□ -0.28
LINC00554-201ENST00000564841 SLC35E4Q6ICL7 350 aa13.29□□□□□ -0.28
LINC00554-201ENST00000564841 C12orf54Q6X4T0 127 aa13.29□□□□□ -0.28
LINC00554-201ENST00000564841 TMEM116Q8NCL8 245 aa13.29□□□□□ -0.28
LINC00554-201ENST00000564841 COQ2Q96H96 371 aa13.29□□□□□ -0.28
LINC00554-201ENST00000564841 TAAR6Q96RI8 345 aa13.29□□□□□ -0.28
LINC00554-201ENST00000564841 ABCA1O95477 2261 aa13.29□□□□□ -0.28
LINC00554-201ENST00000564841 IGKV1OR2-108A0A075B7D4 117 aa13.29□□□□□ -0.28
LINC00554-201ENST00000564841 CD5LO43866 347 aa13.29□□□□□ -0.28
LINC00554-201ENST00000564841 TMEM108Q6UXF1 575 aa13.29□□□□□ -0.28
LINC00554-201ENST00000564841 TEX45Q8NA69 505 aa13.29□□□□□ -0.28
LINC00554-201ENST00000564841 RAB37Q96AX2 223 aa13.29□□□□□ -0.28
LINC00554-201ENST00000564841 SCRT2Q9NQ03 307 aa13.29□□□□□ -0.28
LINC00554-201ENST00000564841 LEPROTL1O95214 131 aa13.29□□□□□ -0.28
LINC00554-201ENST00000564841 C5orf17Q8NAS9 161 aa13.29□□□□□ -0.28
LINC00554-201ENST00000564841 H3BUT2 72 aa13.28□□□□□ -0.28
LINC00554-201ENST00000564841 CSN3P07498 182 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms