RNA–Protein interactions for RNA: ENST00000564600.6

CHD9-211, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-211ENST00000564600 PDE6HQ13956 83 aa0.7□□□□□ -2.3
CHD9-211ENST00000564600 CDK10Q15131 360 aa0.7□□□□□ -2.3
CHD9-211ENST00000564600 KISS1Q15726 138 aa0.7□□□□□ -2.3
CHD9-211ENST00000564600 KCNJ8Q15842 424 aa0.7□□□□□ -2.3
CHD9-211ENST00000564600 C10orf55Q5SWW7 151 aa0.7□□□□□ -2.3
CHD9-211ENST00000564600 Q6Q795 121 aa0.7□□□□□ -2.3
CHD9-211ENST00000564600 Q6ZQT0 140 aa0.7□□□□□ -2.3
CHD9-211ENST00000564600 C7orf65Q6ZTY9 151 aa0.7□□□□□ -2.3
CHD9-211ENST00000564600 SLC36A1Q7Z2H8 476 aa0.7□□□□□ -2.3
CHD9-211ENST00000564600 LRRC28Q86X40 367 aaPredicted RBP0.7□□□□□ -2.3
CHD9-211ENST00000564600 KRT222Q8N1A0 295 aa0.7□□□□□ -2.3
CHD9-211ENST00000564600 Q8N2B8 174 aa0.7□□□□□ -2.3
CHD9-211ENST00000564600 OR11H6Q8NGC7 330 aa0.7□□□□□ -2.3
CHD9-211ENST00000564600 TMEM106AQ96A25 262 aa0.7□□□□□ -2.3
CHD9-211ENST00000564600 CHMP6Q96FZ7 201 aa0.7□□□□□ -2.3
CHD9-211ENST00000564600 Q96M85 177 aa0.7□□□□□ -2.3
CHD9-211ENST00000564600 C11orf68Q9H3H3 251 aaKnown RBP0.7□□□□□ -2.3
CHD9-211ENST00000564600 HS3ST2Q9Y278 367 aa0.7□□□□□ -2.3
CHD9-211ENST00000564600 FREM1Q5H8C1 2179 aa0.7□□□□□ -2.3
CHD9-211ENST00000564600 MED1Q15648 1581 aaPredicted RBP0.7□□□□□ -2.3
CHD9-211ENST00000564600 TTC21AQ8NDW8 1320 aa0.69□□□□□ -2.3
CHD9-211ENST00000564600 TRBV19A0A075B6N1 114 aa0.69□□□□□ -2.3
CHD9-211ENST00000564600 TRAV4A0A0B4J268 109 aa0.69□□□□□ -2.3
CHD9-211ENST00000564600 PIRO00625 290 aa0.69□□□□□ -2.3
CHD9-211ENST00000564600 OR2T1O43869 369 aa0.69□□□□□ -2.3
CHD9-211ENST00000564600 LYPLA2O95372 231 aa0.69□□□□□ -2.3
CHD9-211ENST00000564600 TNNC2P02585 160 aa0.69□□□□□ -2.3
CHD9-211ENST00000564600 C1QBP02746 253 aa0.69□□□□□ -2.3
CHD9-211ENST00000564600 SHBGP04278 402 aa0.69□□□□□ -2.3
CHD9-211ENST00000564600 C8GP07360 202 aa0.69□□□□□ -2.3
CHD9-211ENST00000564600 BAALC-AS2P0C853 105 aa0.69□□□□□ -2.3
CHD9-211ENST00000564600 NEFHP12036 1026 aa0.69□□□□□ -2.3
CHD9-211ENST00000564600 HSD11B1P28845 292 aa0.69□□□□□ -2.3
CHD9-211ENST00000564600 AQP4P55087 323 aa0.69□□□□□ -2.3
CHD9-211ENST00000564600 MRPS25P82663 173 aaKnown RBP0.69□□□□□ -2.3
CHD9-211ENST00000564600 MRPS15P82914 257 aaKnown RBP0.69□□□□□ -2.3
CHD9-211ENST00000564600 SLC38A11Q08AI6 406 aa0.69□□□□□ -2.3
CHD9-211ENST00000564600 ITGB3BPQ13352 177 aaPredicted RBP0.69□□□□□ -2.3
CHD9-211ENST00000564600 LINC01554Q52M75 96 aa0.69□□□□□ -2.3
CHD9-211ENST00000564600 LCA10Q71F78 164 aa0.69□□□□□ -2.3
CHD9-211ENST00000564600 FP248Q71RG6 208 aaPredicted RBP0.69□□□□□ -2.3
CHD9-211ENST00000564600 RPS19BP1Q86WX3 136 aaKnown RBP0.69□□□□□ -2.3
CHD9-211ENST00000564600 ANKRD29Q8N6D5 301 aa0.69□□□□□ -2.3
CHD9-211ENST00000564600 SIGLECL1Q8N7X8 197 aa0.69□□□□□ -2.3
CHD9-211ENST00000564600 OR51D1Q8NGF3 324 aa0.69□□□□□ -2.3
CHD9-211ENST00000564600 KLK6Q92876 244 aa0.69□□□□□ -2.3
CHD9-211ENST00000564600 TMEM147Q9BVK8 224 aa0.69□□□□□ -2.3
CHD9-211ENST00000564600 NMNAT1Q9HAN9 279 aaPredicted RBP0.69□□□□□ -2.3
CHD9-211ENST00000564600 NHP2Q9NX24 153 aaKnown RBP0.69□□□□□ -2.3
CHD9-211ENST00000564600 IL20Q9NYY1 176 aa0.69□□□□□ -2.3
CHD9-211ENST00000564600 UBAP1Q9NZ09 502 aa0.69□□□□□ -2.3
CHD9-211ENST00000564600 EPDR1Q9UM22 224 aa0.69□□□□□ -2.3
CHD9-211ENST00000564600 CYSLTR1Q9Y271 337 aa0.69□□□□□ -2.3
CHD9-211ENST00000564600 PRELID3BQ9Y3B1 194 aa0.69□□□□□ -2.3
CHD9-211ENST00000564600 V9GYY5 206 aaPredicted RBP0.69□□□□□ -2.3
CHD9-211ENST00000564600 MACF1Q9UPN3 7388 aaKnown RBP0.69□□□□□ -2.3
CHD9-211ENST00000564600 COL6A6A6NMZ7 2263 aa0.69□□□□□ -2.3
CHD9-211ENST00000564600 ARHGEF28Q8N1W1 1705 aaKnown RBP0.69□□□□□ -2.3
CHD9-211ENST00000564600 PCDH15Q96QU1 1955 aa0.68□□□□□ -2.3
CHD9-211ENST00000564600 PLXND1Q9Y4D7 1925 aa0.68□□□□□ -2.3
CHD9-211ENST00000564600 TRBV6-5A0A0K0K1A5 114 aa0.68□□□□□ -2.3
CHD9-211ENST00000564600 C7orf71A4D174 169 aa0.68□□□□□ -2.3
CHD9-211ENST00000564600 FAM159BA6NKW6 160 aa0.68□□□□□ -2.3
CHD9-211ENST00000564600 PDE6DO43924 150 aa0.68□□□□□ -2.3
CHD9-211ENST00000564600 PMP2P02689 132 aa0.68□□□□□ -2.3
CHD9-211ENST00000564600 PPBPP02775 128 aa0.68□□□□□ -2.3
CHD9-211ENST00000564600 ANGP03950 147 aaKnown RBP0.68□□□□□ -2.3
CHD9-211ENST00000564600 KRTAP10-4P60372 401 aaPredicted RBP0.68□□□□□ -2.3
CHD9-211ENST00000564600 HSPE1P61604 102 aaKnown RBP0.68□□□□□ -2.3
CHD9-211ENST00000564600 ZNF846Q147U1 533 aa0.68□□□□□ -2.3
CHD9-211ENST00000564600 TMEM155Q4W5P6 130 aa0.68□□□□□ -2.3
CHD9-211ENST00000564600 SPANXN5Q5MJ07 72 aa0.68□□□□□ -2.3
CHD9-211ENST00000564600 FAM173BQ6P4H8 233 aa0.68□□□□□ -2.3
CHD9-211ENST00000564600 LCN15Q6UWW0 184 aa0.68□□□□□ -2.3
CHD9-211ENST00000564600 C12orf29Q8N999 325 aa0.68□□□□□ -2.3
CHD9-211ENST00000564600 OR51A2Q8NGJ7 313 aa0.68□□□□□ -2.3
CHD9-211ENST00000564600 PPP1R14BQ96C90 147 aa0.68□□□□□ -2.3
CHD9-211ENST00000564600 GPR146Q96CH1 333 aa0.68□□□□□ -2.3
CHD9-211ENST00000564600 ULBP3Q9BZM4 244 aa0.68□□□□□ -2.3
CHD9-211ENST00000564600 CST9LQ9H4G1 147 aa0.68□□□□□ -2.3
CHD9-211ENST00000564600 TVP23BQ9NYZ1 205 aa0.68□□□□□ -2.3
CHD9-211ENST00000564600 BAZ2BQ9UIF8 2168 aaKnown RBP0.68□□□□□ -2.3
CHD9-211ENST00000564600 ERGIC3Q9Y282 383 aa0.68□□□□□ -2.3
CHD9-211ENST00000564600 PKIGQ9Y2B9 76 aa0.68□□□□□ -2.3
CHD9-211ENST00000564600 ARL5AQ9Y689 179 aa0.68□□□□□ -2.3
CHD9-211ENST00000564600 ALPK2Q86TB3 2170 aa0.67□□□□□ -2.3
CHD9-211ENST00000564600 MICAL3Q7RTP6 2002 aa0.67□□□□□ -2.3
CHD9-211ENST00000564600 LOC110117498A0A087WWA1 95 aa0.67□□□□□ -2.3
CHD9-211ENST00000564600 TMEM212A6NML5 194 aa0.67□□□□□ -2.3
CHD9-211ENST00000564600 M0R2N4 97 aa0.67□□□□□ -2.3
CHD9-211ENST00000564600 CRYZL1O95825 349 aa0.67□□□□□ -2.3
CHD9-211ENST00000564600 SERPINA1P01009 418 aa0.67□□□□□ -2.3
CHD9-211ENST00000564600 DEFA4P12838 97 aa0.67□□□□□ -2.3
CHD9-211ENST00000564600 REEP5Q00765 189 aa0.67□□□□□ -2.3
CHD9-211ENST00000564600 TMED2Q15363 201 aa0.67□□□□□ -2.3
CHD9-211ENST00000564600 RHEBQ15382 184 aa0.67□□□□□ -2.3
CHD9-211ENST00000564600 DHRS4L2Q6PKH6 230 aa0.67□□□□□ -2.3
CHD9-211ENST00000564600 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.67□□□□□ -2.3
CHD9-211ENST00000564600 Q6ZSA8 131 aa0.67□□□□□ -2.3
CHD9-211ENST00000564600 TRAPPC6BQ86SZ2 158 aa0.67□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms