RNA–Protein interactions for RNA: ENST00000564387.5

USB1-209, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-209ENST00000564387 MLANAQ16655 118 aa13.1□□□□□ -0.31
USB1-209ENST00000564387 DEFB114Q30KQ6 69 aa13.1□□□□□ -0.31
USB1-209ENST00000564387 Q56UQ5 140 aa13.1□□□□□ -0.31
USB1-209ENST00000564387 C11orf87Q6NUJ2 197 aa13.1□□□□□ -0.31
USB1-209ENST00000564387 NOXA1Q86UR1 476 aa13.1□□□□□ -0.31
USB1-209ENST00000564387 DUSP18Q8NEJ0 188 aa13.1□□□□□ -0.31
USB1-209ENST00000564387 OR4X1Q8NH49 305 aa13.1□□□□□ -0.31
USB1-209ENST00000564387 MARC2Q969Z3 335 aa13.1□□□□□ -0.31
USB1-209ENST00000564387 PALMDQ9NP74 551 aa13.1□□□□□ -0.31
USB1-209ENST00000564387 TECRQ9NZ01 308 aaKnown RBP13.1□□□□□ -0.31
USB1-209ENST00000564387 MRPL36Q9P0J6 103 aaKnown RBP13.1□□□□□ -0.31
USB1-209ENST00000564387 TRAV6A0A075B6T7 132 aa13.09□□□□□ -0.31
USB1-209ENST00000564387 ZNF320A2RRD8 509 aa13.09□□□□□ -0.31
USB1-209ENST00000564387 K7EMT4 169 aa13.09□□□□□ -0.31
USB1-209ENST00000564387 NUPL2O15504 423 aaKnown RBP13.09□□□□□ -0.31
USB1-209ENST00000564387 TMEM50AO95807 157 aa13.09□□□□□ -0.31
USB1-209ENST00000564387 IGHV3-48P01763 117 aa13.09□□□□□ -0.31
USB1-209ENST00000564387 H2AFB2P0C5Z0 115 aa13.09□□□□□ -0.31
USB1-209ENST00000564387 EDN2P20800 178 aa13.09□□□□□ -0.31
USB1-209ENST00000564387 NPY1RP25929 384 aa13.09□□□□□ -0.31
USB1-209ENST00000564387 NPBWR1P48145 328 aa13.09□□□□□ -0.31
USB1-209ENST00000564387 ID3Q02535 119 aa13.09□□□□□ -0.31
USB1-209ENST00000564387 DCTN2Q13561 401 aaKnown RBP13.09□□□□□ -0.31
USB1-209ENST00000564387 HAPLN4Q86UW8 402 aa13.09□□□□□ -0.31
USB1-209ENST00000564387 UBAC2Q8NBM4 344 aa13.09□□□□□ -0.31
USB1-209ENST00000564387 OR52B4Q8NGK2 314 aa13.09□□□□□ -0.31
USB1-209ENST00000564387 OR10C1Q96KK4 312 aa13.09□□□□□ -0.31
USB1-209ENST00000564387 UFC1Q9Y3C8 167 aa13.09□□□□□ -0.31
USB1-209ENST00000564387 IGHV3-35A0A0C4DH35 117 aa13.08□□□□□ -0.32
USB1-209ENST00000564387 C15orf62A8K5M9 175 aa13.08□□□□□ -0.32
USB1-209ENST00000564387 MPTX1A8MV57 137 aa13.08□□□□□ -0.32
USB1-209ENST00000564387 CLN5O75503 358 aa13.08□□□□□ -0.32
USB1-209ENST00000564387 OPRK1P41145 380 aa13.08□□□□□ -0.32
USB1-209ENST00000564387 RELQ04864 619 aaPredicted RBP13.08□□□□□ -0.32
USB1-209ENST00000564387 TM4SF20Q53R12 229 aa13.08□□□□□ -0.32
USB1-209ENST00000564387 LCN12Q6JVE5 192 aa13.08□□□□□ -0.32
USB1-209ENST00000564387 TMEM116Q8NCL8 245 aa13.08□□□□□ -0.32
USB1-209ENST00000564387 OR4D5Q8NGN0 318 aa13.08□□□□□ -0.32
USB1-209ENST00000564387 MRPL27Q9P0M9 148 aaKnown RBP13.08□□□□□ -0.32
USB1-209ENST00000564387 RPS10-NUDT3A0A1W2PQS6 291 aa13.07□□□□□ -0.32
USB1-209ENST00000564387 IZUMO1RA6ND01 250 aa13.07□□□□□ -0.32
USB1-209ENST00000564387 SYNGR2O43760 224 aa13.07□□□□□ -0.32
USB1-209ENST00000564387 GNG7O60262 68 aa13.07□□□□□ -0.32
USB1-209ENST00000564387 MED6O75586 246 aa13.07□□□□□ -0.32
USB1-209ENST00000564387 LY86O95711 162 aa13.07□□□□□ -0.32
USB1-209ENST00000564387 IFNA21P01568 189 aa13.07□□□□□ -0.32
USB1-209ENST00000564387 SLC25A4P12235 298 aa13.07□□□□□ -0.32
USB1-209ENST00000564387 CD300EQ496F6 205 aaPredicted RBP13.07□□□□□ -0.32
USB1-209ENST00000564387 PRSS54Q6PEW0 395 aa13.07□□□□□ -0.32
USB1-209ENST00000564387 Q8N1Y9 231 aa13.07□□□□□ -0.32
USB1-209ENST00000564387 ZNF431Q8TF32 576 aaPredicted RBP13.07□□□□□ -0.32
USB1-209ENST00000564387 DAZ1Q9NQZ3 744 aaKnown RBP13.07□□□□□ -0.32
USB1-209ENST00000564387 ZNF785A8K8V0 405 aa13.06□□□□□ -0.32
USB1-209ENST00000564387 IFNA10P01566 189 aa13.06□□□□□ -0.32
USB1-209ENST00000564387 IL5P05113 134 aa13.06□□□□□ -0.32
USB1-209ENST00000564387 UXS1Q8NBZ7 420 aa13.06□□□□□ -0.32
USB1-209ENST00000564387 CACNG8Q8WXS5 425 aa13.06□□□□□ -0.32
USB1-209ENST00000564387 CIB3Q96Q77 187 aaPredicted RBP13.06□□□□□ -0.32
USB1-209ENST00000564387 MLXQ9UH92 298 aa13.06□□□□□ -0.32
USB1-209ENST00000564387 COL7A1Q02388 2944 aa13.05□□□□□ -0.32
USB1-209ENST00000564387 IGKV1-17P01599 117 aa13.05□□□□□ -0.32
USB1-209ENST00000564387 CD69Q07108 199 aa13.05□□□□□ -0.32
USB1-209ENST00000564387 DEFB121Q5J5C9 76 aa13.05□□□□□ -0.32
USB1-209ENST00000564387 ETFRF1Q6IPR1 90 aa13.05□□□□□ -0.32
USB1-209ENST00000564387 NRARPQ7Z6K4 114 aa13.05□□□□□ -0.32
USB1-209ENST00000564387 SEC22CQ9BRL7 303 aa13.05□□□□□ -0.32
USB1-209ENST00000564387 TRAV30A0A087WSZ9 112 aa13.04□□□□□ -0.32
USB1-209ENST00000564387 GPX4P36969 197 aaPredicted RBP13.04□□□□□ -0.32
USB1-209ENST00000564387 ZNF600Q6ZNG1 722 aa13.04□□□□□ -0.32
USB1-209ENST00000564387 ENKURQ8TC29 256 aa13.04□□□□□ -0.32
USB1-209ENST00000564387 ZFAND3Q9H8U3 227 aa13.04□□□□□ -0.32
USB1-209ENST00000564387 TRAV25A0A0B4J276 109 aa13.03□□□□□ -0.32
USB1-209ENST00000564387 A8MZ25 164 aa13.03□□□□□ -0.32
USB1-209ENST00000564387 PRSS46E5RG02 174 aa13.03□□□□□ -0.32
USB1-209ENST00000564387 IGLC1P0CG04 106 aa13.03□□□□□ -0.32
USB1-209ENST00000564387 NKX2-1P43699 371 aaPredicted RBP13.03□□□□□ -0.32
USB1-209ENST00000564387 TOMM20LQ6UXN7 152 aa13.03□□□□□ -0.32
USB1-209ENST00000564387 ZBTB8BQ8NAP8 495 aaPredicted RBP13.03□□□□□ -0.32
USB1-209ENST00000564387 DYNLRB2Q8TF09 96 aa13.03□□□□□ -0.32
USB1-209ENST00000564387 B9D2Q9BPU9 175 aa13.03□□□□□ -0.32
USB1-209ENST00000564387 MARVELD1Q9BSK0 173 aa13.03□□□□□ -0.32
USB1-209ENST00000564387 MAGT1Q9H0U3 335 aa13.03□□□□□ -0.32
USB1-209ENST00000564387 SMPXQ9UHP9 88 aa13.03□□□□□ -0.32
USB1-209ENST00000564387 SMAD5-AS1Q9Y6J3 95 aa13.03□□□□□ -0.32
USB1-209ENST00000564387 IAPPP10997 89 aa13.02□□□□□ -0.33
USB1-209ENST00000564387 RND2P52198 227 aa13.02□□□□□ -0.33
USB1-209ENST00000564387 YPEL3P61236 119 aaPredicted RBP13.02□□□□□ -0.33
USB1-209ENST00000564387 IAH1Q2TAA2 248 aaPredicted RBP13.02□□□□□ -0.33
USB1-209ENST00000564387 SLC16A13Q7RTY0 426 aa13.02□□□□□ -0.33
USB1-209ENST00000564387 TMEM61Q8N0U2 210 aa13.02□□□□□ -0.33
USB1-209ENST00000564387 C12orf45Q8N5I9 185 aaPredicted RBP13.02□□□□□ -0.33
USB1-209ENST00000564387 C20orf24Q9BUV8 137 aa13.02□□□□□ -0.33
USB1-209ENST00000564387 WRBO00258 174 aa13.01□□□□□ -0.33
USB1-209ENST00000564387 IFNA4P05014 189 aa13.01□□□□□ -0.33
USB1-209ENST00000564387 PAX9P55771 341 aa13.01□□□□□ -0.33
USB1-209ENST00000564387 DEFA1P59665 94 aa13.01□□□□□ -0.33
USB1-209ENST00000564387 DEFA3P59666 94 aa13.01□□□□□ -0.33
USB1-209ENST00000564387 POLR2GP62487 172 aaKnown RBP eCLIP13.01□□□□□ -0.33
USB1-209ENST00000564387 RPP30P78346 268 aaKnown RBP13.01□□□□□ -0.33
USB1-209ENST00000564387 BTNL8Q6UX41 500 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms