RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 LINC00527Q9UJ94 153 aa17.25■□□□□ 0.35
LINC01960-201ENST00000563759 IGLV11-55A0A075B6I3 123 aa17.24■□□□□ 0.35
LINC01960-201ENST00000563759 AGPAT2O15120 278 aa17.24■□□□□ 0.35
LINC01960-201ENST00000563759 CENPVQ7Z7K6 275 aaPredicted RBP17.24■□□□□ 0.35
LINC01960-201ENST00000563759 NPIPB3Q92617 1050 aa17.24■□□□□ 0.35
LINC01960-201ENST00000563759 FANCD2OSQ96PS1 177 aa17.24■□□□□ 0.35
LINC01960-201ENST00000563759 DUX5Q96PT3 197 aa17.24■□□□□ 0.35
LINC01960-201ENST00000563759 ZNF355PQ9NSJ1 428 aa17.24■□□□□ 0.35
LINC01960-201ENST00000563759 TRIM77I1YAP6 450 aa17.24■□□□□ 0.35
LINC01960-201ENST00000563759 I3L2K1 104 aa17.24■□□□□ 0.35
LINC01960-201ENST00000563759 IGF1P05019 195 aa17.24■□□□□ 0.35
LINC01960-201ENST00000563759 CD99P14209 185 aa17.24■□□□□ 0.35
LINC01960-201ENST00000563759 CRIP2P52943 208 aaPredicted RBP17.24■□□□□ 0.35
LINC01960-201ENST00000563759 NDUFA5Q16718 116 aa17.24■□□□□ 0.35
LINC01960-201ENST00000563759 Q6ZRG5 221 aa17.24■□□□□ 0.35
LINC01960-201ENST00000563759 FAM213BQ8TBF2 198 aa17.24■□□□□ 0.35
LINC01960-201ENST00000563759 MRPL36Q9P0J6 103 aaKnown RBP17.24■□□□□ 0.35
LINC01960-201ENST00000563759 IGKV1OR2-108A0A075B7D4 117 aa17.23■□□□□ 0.35
LINC01960-201ENST00000563759 AP4M1O00189 453 aa17.23■□□□□ 0.35
LINC01960-201ENST00000563759 FHITP49789 147 aa17.23■□□□□ 0.35
LINC01960-201ENST00000563759 ZNF616Q08AN1 781 aa17.23■□□□□ 0.35
LINC01960-201ENST00000563759 FFAR4Q5NUL3 377 aa17.23■□□□□ 0.35
LINC01960-201ENST00000563759 ACSM6Q6P461 480 aa17.23■□□□□ 0.35
LINC01960-201ENST00000563759 SAT2Q96F10 170 aaPredicted RBP17.23■□□□□ 0.35
LINC01960-201ENST00000563759 CXorf58Q96LI9 332 aa17.23■□□□□ 0.35
LINC01960-201ENST00000563759 K7EIM0 57 aa17.22■□□□□ 0.35
LINC01960-201ENST00000563759 Q6ZS46 218 aa17.22■□□□□ 0.35
LINC01960-201ENST00000563759 NPFFR1Q9GZQ6 430 aa17.22■□□□□ 0.35
LINC01960-201ENST00000563759 ZFP92A6NM28 416 aa17.22■□□□□ 0.35
LINC01960-201ENST00000563759 OR2J3O76001 311 aa17.22■□□□□ 0.35
LINC01960-201ENST00000563759 HIST1H1BP16401 226 aaKnown RBP17.22■□□□□ 0.35
LINC01960-201ENST00000563759 SRD5A1P18405 259 aa17.22■□□□□ 0.35
LINC01960-201ENST00000563759 TMEM86BQ8N661 226 aa17.22■□□□□ 0.35
LINC01960-201ENST00000563759 TMEM116Q8NCL8 245 aa17.22■□□□□ 0.35
LINC01960-201ENST00000563759 PXMP4Q9Y6I8 212 aa17.22■□□□□ 0.35
LINC01960-201ENST00000563759 SETXQ7Z333 2677 aaKnown RBP17.22■□□□□ 0.35
LINC01960-201ENST00000563759 OR10J1P30954 320 aa17.21■□□□□ 0.35
LINC01960-201ENST00000563759 BLOC1S1P78537 153 aa17.21■□□□□ 0.35
LINC01960-201ENST00000563759 DEFA5Q01523 94 aa17.21■□□□□ 0.35
LINC01960-201ENST00000563759 TMEM41BQ5BJD5 291 aa17.21■□□□□ 0.35
LINC01960-201ENST00000563759 PXDC1Q5TGL8 231 aa17.21■□□□□ 0.35
LINC01960-201ENST00000563759 MIC13Q5XKP0 118 aa17.21■□□□□ 0.35
LINC01960-201ENST00000563759 NOL4LQ96MY1 436 aaPredicted RBP17.21■□□□□ 0.35
LINC01960-201ENST00000563759 VSIRQ9H7M9 311 aa17.21■□□□□ 0.35
LINC01960-201ENST00000563759 CDC42EP3Q9UKI2 254 aa17.21■□□□□ 0.35
LINC01960-201ENST00000563759 ANK3Q12955 4377 aaKnown RBP17.21■□□□□ 0.35
LINC01960-201ENST00000563759 HIVEP1P15822 2718 aa17.21■□□□□ 0.35
LINC01960-201ENST00000563759 FOSL1P15407 271 aa17.2■□□□□ 0.34
LINC01960-201ENST00000563759 C19orf54Q5BKX5 351 aa17.2■□□□□ 0.34
LINC01960-201ENST00000563759 STPG3Q8N7X2 389 aa17.2■□□□□ 0.34
LINC01960-201ENST00000563759 DNAJC9-AS1A6NH13 148 aa17.2■□□□□ 0.34
LINC01960-201ENST00000563759 SOX15O60248 233 aa17.2■□□□□ 0.34
LINC01960-201ENST00000563759 TSPAN15O95858 294 aa17.2■□□□□ 0.34
LINC01960-201ENST00000563759 MBP02144 154 aa17.2■□□□□ 0.34
LINC01960-201ENST00000563759 B2MP61769 119 aa17.2■□□□□ 0.34
LINC01960-201ENST00000563759 DPPA3Q6W0C5 159 aa17.2■□□□□ 0.34
LINC01960-201ENST00000563759 THAP8Q8NA92 274 aa17.2■□□□□ 0.34
LINC01960-201ENST00000563759 PRSS22Q9GZN4 317 aa17.2■□□□□ 0.34
LINC01960-201ENST00000563759 RPRMQ9NS64 109 aa17.2■□□□□ 0.34
LINC01960-201ENST00000563759 FBXL7Q9UJT9 491 aa17.2■□□□□ 0.34
LINC01960-201ENST00000563759 RPL29P47914 159 aaKnown RBP17.19■□□□□ 0.34
LINC01960-201ENST00000563759 RAB2AP61019 212 aa17.19■□□□□ 0.34
LINC01960-201ENST00000563759 TMEM95Q3KNT9 176 aa17.19■□□□□ 0.34
LINC01960-201ENST00000563759 SLC7A5P1Q8MH63 180 aa17.19■□□□□ 0.34
LINC01960-201ENST00000563759 BPIFCQ8NFQ6 507 aa17.19■□□□□ 0.34
LINC01960-201ENST00000563759 OR4X1Q8NH49 305 aa17.19■□□□□ 0.34
LINC01960-201ENST00000563759 ACOT6Q3I5F7 207 aaPredicted RBP17.18■□□□□ 0.34
LINC01960-201ENST00000563759 PFDN2Q9UHV9 154 aa17.18■□□□□ 0.34
LINC01960-201ENST00000563759 S4R3C0 116 aa17.18■□□□□ 0.34
LINC01960-201ENST00000563759 TCRBV4S1A1TA0A5B7 111 aa17.18■□□□□ 0.34
LINC01960-201ENST00000563759 TEX46H3BTG2 121 aa17.18■□□□□ 0.34
LINC01960-201ENST00000563759 NDUFB8O95169 186 aa17.18■□□□□ 0.34
LINC01960-201ENST00000563759 RHOGP84095 191 aa17.18■□□□□ 0.34
LINC01960-201ENST00000563759 CYP2G1PQ6ZSU1 146 aa17.18■□□□□ 0.34
LINC01960-201ENST00000563759 Q71RC1 249 aaPredicted RBP17.18■□□□□ 0.34
LINC01960-201ENST00000563759 MS4A10Q96PG2 267 aa17.18■□□□□ 0.34
LINC01960-201ENST00000563759 HRH4Q9H3N8 390 aa17.18■□□□□ 0.34
LINC01960-201ENST00000563759 SLC39A9Q9NUM3 307 aa17.18■□□□□ 0.34
LINC01960-201ENST00000563759 SLC45A2Q9UMX9 530 aa17.18■□□□□ 0.34
LINC01960-201ENST00000563759 IGKV1D-37A0A075B6S9 117 aa17.17■□□□□ 0.34
LINC01960-201ENST00000563759 LINC00862A6NCI5 91 aa17.17■□□□□ 0.34
LINC01960-201ENST00000563759 MFSD2BA6NFX1 497 aa17.17■□□□□ 0.34
LINC01960-201ENST00000563759 M6PRP20645 277 aa17.17■□□□□ 0.34
LINC01960-201ENST00000563759 C15orf32Q32M92 178 aa17.17■□□□□ 0.34
LINC01960-201ENST00000563759 NECAP1Q8NC96 275 aa17.17■□□□□ 0.34
LINC01960-201ENST00000563759 OR10G4Q8NGN3 311 aa17.17■□□□□ 0.34
LINC01960-201ENST00000563759 OR10G9Q8NGN4 311 aa17.17■□□□□ 0.34
LINC01960-201ENST00000563759 OR10G7Q8NGN6 311 aa17.17■□□□□ 0.34
LINC01960-201ENST00000563759 NSD1Q96L73 2696 aaPredicted RBP17.17■□□□□ 0.34
LINC01960-201ENST00000563759 GATA2P23769 480 aaPredicted RBP17.16■□□□□ 0.34
LINC01960-201ENST00000563759 NPBWR1P48145 328 aa17.16■□□□□ 0.34
LINC01960-201ENST00000563759 PRR20EP86478 221 aa17.16■□□□□ 0.34
LINC01960-201ENST00000563759 PRR20CP86479 221 aa17.16■□□□□ 0.34
LINC01960-201ENST00000563759 PRR20DP86480 221 aa17.16■□□□□ 0.34
LINC01960-201ENST00000563759 PRR20BP86481 221 aa17.16■□□□□ 0.34
LINC01960-201ENST00000563759 PRR20AP86496 221 aa17.16■□□□□ 0.34
LINC01960-201ENST00000563759 C21orf62Q9NYP8 219 aa17.16■□□□□ 0.34
LINC01960-201ENST00000563759 TRBV9A0A0B4J1U6 114 aa17.16■□□□□ 0.34
LINC01960-201ENST00000563759 CLN5O75503 358 aa17.16■□□□□ 0.34
LINC01960-201ENST00000563759 MFAP4P55083 255 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms