RNA–Protein interactions for RNA: ENST00000563308.1

SNX29-202, Transcript of sorting nexin 29, humanhuman

TSL 5

Gene SNX29, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-202ENST00000563308 TMEM229BQ8NBD8 167 aa7.42□□□□□ -1.22
SNX29-202ENST00000563308 AP3S1Q92572 193 aa7.42□□□□□ -1.22
SNX29-202ENST00000563308 PINX1Q96BK5 328 aaKnown RBP7.42□□□□□ -1.22
SNX29-202ENST00000563308 GALNT14Q96FL9 552 aa7.42□□□□□ -1.22
SNX29-202ENST00000563308 FNDC4Q9H6D8 234 aaPredicted RBP7.42□□□□□ -1.22
SNX29-202ENST00000563308 VSIRQ9H7M9 311 aa7.42□□□□□ -1.22
SNX29-202ENST00000563308 ZFAND3Q9H8U3 227 aa7.42□□□□□ -1.22
SNX29-202ENST00000563308 TRAV14DV4A0A0A6YYC5 116 aa7.41□□□□□ -1.22
SNX29-202ENST00000563308 A0A1B0GU03 582 aa7.41□□□□□ -1.22
SNX29-202ENST00000563308 GABARAPH6UMI1 98 aa7.41□□□□□ -1.22
SNX29-202ENST00000563308 GNG7O60262 68 aa7.41□□□□□ -1.22
SNX29-202ENST00000563308 TMEM50AO95807 157 aa7.41□□□□□ -1.22
SNX29-202ENST00000563308 BMI1P35226 326 aa7.41□□□□□ -1.22
SNX29-202ENST00000563308 ETV6P41212 452 aa7.41□□□□□ -1.22
SNX29-202ENST00000563308 SPCS2Q15005 226 aa7.41□□□□□ -1.22
SNX29-202ENST00000563308 MLANAQ16655 118 aa7.41□□□□□ -1.22
SNX29-202ENST00000563308 BSXQ3C1V8 233 aa7.41□□□□□ -1.22
SNX29-202ENST00000563308 TMEM217Q8N7C4 229 aa7.41□□□□□ -1.22
SNX29-202ENST00000563308 STPG3Q8N7X2 389 aa7.41□□□□□ -1.22
SNX29-202ENST00000563308 LHFPL5Q8TAF8 219 aa7.41□□□□□ -1.22
SNX29-202ENST00000563308 MARCH1Q8TCQ1 289 aa7.41□□□□□ -1.22
SNX29-202ENST00000563308 PHLDA1Q8WV24 401 aaPredicted RBP7.41□□□□□ -1.22
SNX29-202ENST00000563308 ST8SIA2Q92186 375 aa7.41□□□□□ -1.22
SNX29-202ENST00000563308 RTBDNQ9BSG5 229 aaPredicted RBP7.41□□□□□ -1.22
SNX29-202ENST00000563308 VPS13DQ5THJ4 4388 aa7.41□□□□□ -1.22
SNX29-202ENST00000563308 CDS2O95674 445 aa7.4□□□□□ -1.22
SNX29-202ENST00000563308 RAB3DO95716 219 aa7.4□□□□□ -1.22
SNX29-202ENST00000563308 ATF4P18848 351 aaPredicted RBP7.4□□□□□ -1.22
SNX29-202ENST00000563308 SNCAP37840 140 aa7.4□□□□□ -1.22
SNX29-202ENST00000563308 NPBWR1P48145 328 aa7.4□□□□□ -1.22
SNX29-202ENST00000563308 TFPI2P48307 235 aa7.4□□□□□ -1.22
SNX29-202ENST00000563308 AKR1C2P52895 323 aa7.4□□□□□ -1.22
SNX29-202ENST00000563308 TAS2R19P59542 299 aa7.4□□□□□ -1.22
SNX29-202ENST00000563308 SOHLH1Q5JUK2 328 aa7.4□□□□□ -1.22
SNX29-202ENST00000563308 SERTAD4-AS1Q5TG53 156 aa7.4□□□□□ -1.22
SNX29-202ENST00000563308 FAAP20Q6NZ36 180 aa7.4□□□□□ -1.22
SNX29-202ENST00000563308 STEAP1BQ6NZ63 245 aa7.4□□□□□ -1.22
SNX29-202ENST00000563308 GBGT1Q8N5D6 347 aa7.4□□□□□ -1.22
SNX29-202ENST00000563308 SLC35G3Q8N808 338 aa7.4□□□□□ -1.22
SNX29-202ENST00000563308 DUSP18Q8NEJ0 188 aa7.4□□□□□ -1.22
SNX29-202ENST00000563308 ZFAND1Q8TCF1 268 aa7.4□□□□□ -1.22
SNX29-202ENST00000563308 GLYATL2Q8WU03 294 aa7.4□□□□□ -1.22
SNX29-202ENST00000563308 C15orf40Q8WUR7 153 aa7.4□□□□□ -1.22
SNX29-202ENST00000563308 TMEM222Q9H0R3 208 aa7.4□□□□□ -1.22
SNX29-202ENST00000563308 COPZ2Q9P299 210 aa7.4□□□□□ -1.22
SNX29-202ENST00000563308 PUS1Q9Y606 427 aaKnown RBP eCLIP7.4□□□□□ -1.22
SNX29-202ENST00000563308 DNAH11Q96DT5 4516 aa7.39□□□□□ -1.23
SNX29-202ENST00000563308 HSPG2P98160 4391 aa7.39□□□□□ -1.23
SNX29-202ENST00000563308 IGKV3-7A0A075B6H7 116 aa7.39□□□□□ -1.23
SNX29-202ENST00000563308 DFFBO76075 338 aa7.39□□□□□ -1.23
SNX29-202ENST00000563308 IFNA17P01571 189 aa7.39□□□□□ -1.23
SNX29-202ENST00000563308 IGKV1-17P01599 117 aa7.39□□□□□ -1.23
SNX29-202ENST00000563308 OR5AC1P0C628 307 aa7.39□□□□□ -1.23
SNX29-202ENST00000563308 RPL5P46777 297 aaKnown RBP7.39□□□□□ -1.23
SNX29-202ENST00000563308 TCTAP57738 103 aa7.39□□□□□ -1.23
SNX29-202ENST00000563308 SSBP1Q04837 148 aaKnown RBP7.39□□□□□ -1.23
SNX29-202ENST00000563308 TRIM16LQ309B1 348 aa7.39□□□□□ -1.23
SNX29-202ENST00000563308 SCGB2B2Q4G0G5 96 aa7.39□□□□□ -1.23
SNX29-202ENST00000563308 ZNF600Q6ZNG1 722 aa7.39□□□□□ -1.23
SNX29-202ENST00000563308 TCF24Q7RTU0 167 aa7.39□□□□□ -1.23
SNX29-202ENST00000563308 FAM24BQ8N5W8 94 aa7.39□□□□□ -1.23
SNX29-202ENST00000563308 CCDC71LQ8N9Z2 235 aa7.39□□□□□ -1.23
SNX29-202ENST00000563308 TMEM170AQ8WVE7 144 aa7.39□□□□□ -1.23
SNX29-202ENST00000563308 SMIM4Q8WVI0 70 aa7.39□□□□□ -1.23
SNX29-202ENST00000563308 CSTL1Q9H114 145 aa7.39□□□□□ -1.23
SNX29-202ENST00000563308 MS4A6AQ9H2W1 248 aa7.39□□□□□ -1.23
SNX29-202ENST00000563308 SRRM2Q9UQ35 2752 aaKnown RBP7.39□□□□□ -1.23
SNX29-202ENST00000563308 IGHV3-66A0A0C4DH42 116 aa7.38□□□□□ -1.23
SNX29-202ENST00000563308 CLN5O75503 358 aa7.38□□□□□ -1.23
SNX29-202ENST00000563308 B3GALNT1O75752 331 aa7.38□□□□□ -1.23
SNX29-202ENST00000563308 ATG12O94817 140 aa7.38□□□□□ -1.23
SNX29-202ENST00000563308 IFNA4P05014 189 aa7.38□□□□□ -1.23
SNX29-202ENST00000563308 CMC4P56277 68 aaPredicted RBP7.38□□□□□ -1.23
SNX29-202ENST00000563308 SPCS3P61009 180 aa7.38□□□□□ -1.23
SNX29-202ENST00000563308 MRPS10P82664 201 aaKnown RBP7.38□□□□□ -1.23
SNX29-202ENST00000563308 SELENOHQ8IZQ5 122 aaKnown RBP7.38□□□□□ -1.23
SNX29-202ENST00000563308 OR4C16Q8NGL9 310 aa7.38□□□□□ -1.23
SNX29-202ENST00000563308 OR4X1Q8NH49 305 aa7.38□□□□□ -1.23
SNX29-202ENST00000563308 OR52E5Q8NH55 327 aa7.38□□□□□ -1.23
SNX29-202ENST00000563308 GPR146Q96CH1 333 aa7.38□□□□□ -1.23
SNX29-202ENST00000563308 RRNAD1Q96FB5 475 aaKnown RBP7.38□□□□□ -1.23
SNX29-202ENST00000563308 GINS3Q9BRX5 216 aa7.38□□□□□ -1.23
SNX29-202ENST00000563308 MRPS26Q9BYN8 205 aaKnown RBP7.38□□□□□ -1.23
SNX29-202ENST00000563308 NAA60Q9H7X0 242 aa7.38□□□□□ -1.23
SNX29-202ENST00000563308 GPR132Q9UNW8 380 aa7.38□□□□□ -1.23
SNX29-202ENST00000563308 TRAV2A0A0B4J234 112 aa7.37□□□□□ -1.23
SNX29-202ENST00000563308 TEX13DA0A0J9YY54 714 aaPredicted RBP7.37□□□□□ -1.23
SNX29-202ENST00000563308 CRYM-AS1A6NIL9 109 aa7.37□□□□□ -1.23
SNX29-202ENST00000563308 MPTX1A8MV57 137 aa7.37□□□□□ -1.23
SNX29-202ENST00000563308 CORTO00230 105 aa7.37□□□□□ -1.23
SNX29-202ENST00000563308 CTDSPLO15194 276 aa7.37□□□□□ -1.23
SNX29-202ENST00000563308 RTL8CO15255 209 aa7.37□□□□□ -1.23
SNX29-202ENST00000563308 RGS5O15539 181 aa7.37□□□□□ -1.23
SNX29-202ENST00000563308 CD5P06127 495 aa7.37□□□□□ -1.23
SNX29-202ENST00000563308 GIG44P09565 113 aaPredicted RBP7.37□□□□□ -1.23
SNX29-202ENST00000563308 CRYBB3P26998 211 aa7.37□□□□□ -1.23
SNX29-202ENST00000563308 HOXA1P49639 335 aaPredicted RBP7.37□□□□□ -1.23
SNX29-202ENST00000563308 SUB1P53999 127 aaKnown RBP eCLIP7.37□□□□□ -1.23
SNX29-202ENST00000563308 MEF2DQ14814 521 aa7.37□□□□□ -1.23
SNX29-202ENST00000563308 SURF2Q15527 256 aaPredicted RBP7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms