RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 OR51H1Q8NH63 302 aa3.47□□□□□ -1.85
SMG1-206ENST00000562668 OR4S2Q8NH73 311 aa3.47□□□□□ -1.85
SMG1-206ENST00000562668 TMEM167AQ8TBQ9 72 aa3.47□□□□□ -1.85
SMG1-206ENST00000562668 GLYATL2Q8WU03 294 aa3.47□□□□□ -1.85
SMG1-206ENST00000562668 S100ZQ8WXG8 99 aa3.47□□□□□ -1.85
SMG1-206ENST00000562668 BORCS5Q969J3 196 aa3.47□□□□□ -1.85
SMG1-206ENST00000562668 GALNT14Q96FL9 552 aa3.47□□□□□ -1.85
SMG1-206ENST00000562668 SEC22AQ96IW7 307 aa3.47□□□□□ -1.85
SMG1-206ENST00000562668 TSNAXQ99598 290 aaKnown RBP3.47□□□□□ -1.85
SMG1-206ENST00000562668 PRRT1Q99946 306 aa3.47□□□□□ -1.85
SMG1-206ENST00000562668 RASL11BQ9BPW5 248 aa3.47□□□□□ -1.85
SMG1-206ENST00000562668 C7orf50Q9BRJ6 194 aaKnown RBP3.47□□□□□ -1.85
SMG1-206ENST00000562668 CCDC32Q9BV29 185 aa3.47□□□□□ -1.85
SMG1-206ENST00000562668 NAA60Q9H7X0 242 aa3.47□□□□□ -1.85
SMG1-206ENST00000562668 ZNF430Q9H8G1 570 aaPredicted RBP3.47□□□□□ -1.85
SMG1-206ENST00000562668 BET1LQ9NYM9 111 aa3.47□□□□□ -1.85
SMG1-206ENST00000562668 COMMD9Q9P000 198 aa3.47□□□□□ -1.85
SMG1-206ENST00000562668 METTL1Q9UBP6 276 aaKnown RBP3.47□□□□□ -1.85
SMG1-206ENST00000562668 LINC00527Q9UJ94 153 aa3.47□□□□□ -1.85
SMG1-206ENST00000562668 KLK9Q9UKQ9 250 aa3.47□□□□□ -1.85
SMG1-206ENST00000562668 VWFP04275 2813 aa3.46□□□□□ -1.86
SMG1-206ENST00000562668 TNCP24821 2201 aa3.46□□□□□ -1.86
SMG1-206ENST00000562668 C3orf85A0A1B0GTC6 90 aa3.46□□□□□ -1.86
SMG1-206ENST00000562668 A0A1W2PN81 502 aa3.46□□□□□ -1.86
SMG1-206ENST00000562668 NAP1L6A6NFF2 107 aa3.46□□□□□ -1.86
SMG1-206ENST00000562668 UPK2O00526 184 aa3.46□□□□□ -1.86
SMG1-206ENST00000562668 LYRM1O43325 122 aa3.46□□□□□ -1.86
SMG1-206ENST00000562668 UPK1BO75841 260 aa3.46□□□□□ -1.86
SMG1-206ENST00000562668 KBTBD11O94819 623 aa3.46□□□□□ -1.86
SMG1-206ENST00000562668 OR2A4O95047 310 aa3.46□□□□□ -1.86
SMG1-206ENST00000562668 BRI3O95415 125 aa3.46□□□□□ -1.86
SMG1-206ENST00000562668 CDS2O95674 445 aa3.46□□□□□ -1.86
SMG1-206ENST00000562668 IGHG4P01861 327 aa3.46□□□□□ -1.86
SMG1-206ENST00000562668 NQO2P16083 231 aa3.46□□□□□ -1.86
SMG1-206ENST00000562668 PSMB8P28062 276 aa3.46□□□□□ -1.86
SMG1-206ENST00000562668 SLC6A1P30531 599 aa3.46□□□□□ -1.86
SMG1-206ENST00000562668 CHRNA7P36544 502 aa3.46□□□□□ -1.86
SMG1-206ENST00000562668 NKX2-1P43699 371 aaPredicted RBP3.46□□□□□ -1.86
SMG1-206ENST00000562668 AP3S2P59780 193 aa3.46□□□□□ -1.86
SMG1-206ENST00000562668 KRTAP12-2P59991 146 aa3.46□□□□□ -1.86
SMG1-206ENST00000562668 SNRPEP62304 92 aaKnown RBP3.46□□□□□ -1.86
SMG1-206ENST00000562668 CATR1Q13166 79 aa3.46□□□□□ -1.86
SMG1-206ENST00000562668 ASAH1Q13510 395 aa3.46□□□□□ -1.86
SMG1-206ENST00000562668 ZNF846Q147U1 533 aa3.46□□□□□ -1.86
SMG1-206ENST00000562668 SP6Q3SY56 376 aa3.46□□□□□ -1.86
SMG1-206ENST00000562668 AARDQ4LEZ3 155 aa3.46□□□□□ -1.86
SMG1-206ENST00000562668 AKIRIN2Q53H80 203 aa3.46□□□□□ -1.86
SMG1-206ENST00000562668 C9orf152Q5JTZ5 239 aa3.46□□□□□ -1.86
SMG1-206ENST00000562668 C10orf55Q5SWW7 151 aa3.46□□□□□ -1.86
SMG1-206ENST00000562668 ZNF57Q68EA5 555 aaPredicted RBP3.46□□□□□ -1.86
SMG1-206ENST00000562668 C12orf54Q6X4T0 127 aa3.46□□□□□ -1.86
SMG1-206ENST00000562668 SLC25A42Q86VD7 318 aa3.46□□□□□ -1.86
SMG1-206ENST00000562668 CMTM1Q8IZ96 169 aa3.46□□□□□ -1.86
SMG1-206ENST00000562668 SELENOHQ8IZQ5 122 aaKnown RBP3.46□□□□□ -1.86
SMG1-206ENST00000562668 OR5AU1Q8NGC0 362 aa3.46□□□□□ -1.86
SMG1-206ENST00000562668 SGMS2Q8NHU3 365 aa3.46□□□□□ -1.86
SMG1-206ENST00000562668 ZFAND1Q8TCF1 268 aa3.46□□□□□ -1.86
SMG1-206ENST00000562668 CD300LFQ8TDQ1 290 aa3.46□□□□□ -1.86
SMG1-206ENST00000562668 SGK494Q96LW2 274 aa3.46□□□□□ -1.86
SMG1-206ENST00000562668 TMEM56Q96MV1 263 aa3.46□□□□□ -1.86
SMG1-206ENST00000562668 OR2A7Q96R45 310 aa3.46□□□□□ -1.86
SMG1-206ENST00000562668 CLCC1Q96S66 551 aa3.46□□□□□ -1.86
SMG1-206ENST00000562668 CITED2Q99967 270 aaPredicted RBP3.46□□□□□ -1.86
SMG1-206ENST00000562668 SLC25A21Q9BQT8 299 aaPredicted RBP3.46□□□□□ -1.86
SMG1-206ENST00000562668 FAM103A1Q9BTL3 118 aaKnown RBP3.46□□□□□ -1.86
SMG1-206ENST00000562668 TMEM222Q9H0R3 208 aa3.46□□□□□ -1.86
SMG1-206ENST00000562668 PRR34Q9NV39 138 aa3.46□□□□□ -1.86
SMG1-206ENST00000562668 SCP2D1Q9UJQ7 156 aa3.46□□□□□ -1.86
SMG1-206ENST00000562668 FLVCR2Q9UPI3 526 aa3.46□□□□□ -1.86
SMG1-206ENST00000562668 PRELID3BQ9Y3B1 194 aa3.46□□□□□ -1.86
SMG1-206ENST00000562668 TMEM56-RWDD3S4R434 201 aa3.46□□□□□ -1.86
SMG1-206ENST00000562668 DNAH9Q9NYC9 4486 aa3.45□□□□□ -1.86
SMG1-206ENST00000562668 TRAV41A0A0B4J266 112 aa3.45□□□□□ -1.86
SMG1-206ENST00000562668 TEX50A0A1B0GTY4 177 aa3.45□□□□□ -1.86
SMG1-206ENST00000562668 LINC00854A0A1B0GVQ3 168 aa3.45□□□□□ -1.86
SMG1-206ENST00000562668 IGLC7A0M8Q6 106 aa3.45□□□□□ -1.86
SMG1-206ENST00000562668 PSMB11A5LHX3 300 aa3.45□□□□□ -1.86
SMG1-206ENST00000562668 B3GALNT1O75752 331 aa3.45□□□□□ -1.86
SMG1-206ENST00000562668 HRASP01112 189 aa3.45□□□□□ -1.86
SMG1-206ENST00000562668 KRASP01116 189 aa3.45□□□□□ -1.86
SMG1-206ENST00000562668 CRYGCP07315 174 aa3.45□□□□□ -1.86
SMG1-206ENST00000562668 OR5AC1P0C628 307 aa3.45□□□□□ -1.86
SMG1-206ENST00000562668 PGAM2P15259 253 aa3.45□□□□□ -1.86
SMG1-206ENST00000562668 HLA-GP17693 338 aa3.45□□□□□ -1.86
SMG1-206ENST00000562668 FAUP35544 74 aaKnown RBP3.45□□□□□ -1.86
SMG1-206ENST00000562668 G6PCP35575 357 aa3.45□□□□□ -1.86
SMG1-206ENST00000562668 OR2B8PP59922 312 aa3.45□□□□□ -1.86
SMG1-206ENST00000562668 PPP1R1AQ13522 171 aa3.45□□□□□ -1.86
SMG1-206ENST00000562668 FXYD3Q14802 87 aa3.45□□□□□ -1.86
SMG1-206ENST00000562668 ANKRD55Q3KP44 614 aa3.45□□□□□ -1.86
SMG1-206ENST00000562668 VMA21Q3ZAQ7 101 aa3.45□□□□□ -1.86
SMG1-206ENST00000562668 TRIQKQ629K1 86 aa3.45□□□□□ -1.86
SMG1-206ENST00000562668 C19orf35Q6ZS72 473 aa3.45□□□□□ -1.86
SMG1-206ENST00000562668 SSX9Q7RTT3 188 aa3.45□□□□□ -1.86
SMG1-206ENST00000562668 MMD2Q8IY49 270 aa3.45□□□□□ -1.86
SMG1-206ENST00000562668 TTC9CQ8N5M4 171 aa3.45□□□□□ -1.86
SMG1-206ENST00000562668 LRTM2Q8N967 370 aa3.45□□□□□ -1.86
SMG1-206ENST00000562668 LFNGQ8NES3 379 aa3.45□□□□□ -1.86
SMG1-206ENST00000562668 OR4A5Q8NH83 315 aa3.45□□□□□ -1.86
SMG1-206ENST00000562668 CHPT1Q8WUD6 406 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms