RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 MGST2Q99735 147 aa11.53□□□□□ -0.56
GTF3C1-203ENST00000562609 PLSCR4Q9NRQ2 329 aa11.53□□□□□ -0.56
GTF3C1-203ENST00000562609 PSG11Q9UQ72 335 aa11.53□□□□□ -0.56
GTF3C1-203ENST00000562609 SMIM17P0DL12 118 aa11.53□□□□□ -0.56
GTF3C1-203ENST00000562609 MEF2CQ06413 473 aaPredicted RBP11.53□□□□□ -0.56
GTF3C1-203ENST00000562609 SLC35E4Q6ICL7 350 aa11.53□□□□□ -0.56
GTF3C1-203ENST00000562609 MRPL21Q7Z2W9 205 aaKnown RBP11.53□□□□□ -0.56
GTF3C1-203ENST00000562609 PERPQ96FX8 193 aa11.53□□□□□ -0.56
GTF3C1-203ENST00000562609 GGTLC1Q9BX51 225 aa11.53□□□□□ -0.56
GTF3C1-203ENST00000562609 PRDM14Q9GZV8 571 aa11.53□□□□□ -0.56
GTF3C1-203ENST00000562609 APC2O95996 2303 aa11.52□□□□□ -0.56
GTF3C1-203ENST00000562609 TRAV24A0A0B4J272 114 aa11.52□□□□□ -0.56
GTF3C1-203ENST00000562609 LEPROTL1O95214 131 aa11.52□□□□□ -0.56
GTF3C1-203ENST00000562609 HBZP02008 142 aa11.52□□□□□ -0.56
GTF3C1-203ENST00000562609 P0C879 139 aa11.52□□□□□ -0.56
GTF3C1-203ENST00000562609 HIST1H1EP10412 219 aaKnown RBP11.52□□□□□ -0.56
GTF3C1-203ENST00000562609 FABP6P51161 128 aa11.52□□□□□ -0.56
GTF3C1-203ENST00000562609 CRYBA4P53673 196 aa11.52□□□□□ -0.56
GTF3C1-203ENST00000562609 COLCA1Q6ZS62 124 aa11.52□□□□□ -0.56
GTF3C1-203ENST00000562609 TMEM178AQ8NBL3 297 aa11.52□□□□□ -0.56
GTF3C1-203ENST00000562609 PMCHL2Q9BQD1 86 aa11.52□□□□□ -0.56
GTF3C1-203ENST00000562609 C1RLQ9NZP8 487 aa11.52□□□□□ -0.56
GTF3C1-203ENST00000562609 CADP27708 2225 aa11.52□□□□□ -0.56
GTF3C1-203ENST00000562609 A0A0G2JLM5 398 aa11.52□□□□□ -0.57
GTF3C1-203ENST00000562609 TEX48A0A1B0GUV7 120 aa11.52□□□□□ -0.57
GTF3C1-203ENST00000562609 H3BRM9 83 aa11.52□□□□□ -0.57
GTF3C1-203ENST00000562609 SYNGR1O43759 233 aa11.52□□□□□ -0.57
GTF3C1-203ENST00000562609 CKS1BP61024 79 aa11.52□□□□□ -0.57
GTF3C1-203ENST00000562609 HSD52Q0P140 79 aa11.52□□□□□ -0.57
GTF3C1-203ENST00000562609 DEFB109BQ30KR1 87 aa11.52□□□□□ -0.57
GTF3C1-203ENST00000562609 SSX8Q7RTT4 187 aa11.52□□□□□ -0.57
GTF3C1-203ENST00000562609 STXBP6Q8NFX7 210 aa11.52□□□□□ -0.57
GTF3C1-203ENST00000562609 TRBV6-6A0A0A6YYG2 114 aa11.51□□□□□ -0.57
GTF3C1-203ENST00000562609 MPDU1O75352 247 aa11.51□□□□□ -0.57
GTF3C1-203ENST00000562609 LYZL6O75951 148 aa11.51□□□□□ -0.57
GTF3C1-203ENST00000562609 CAMPP49913 170 aa11.51□□□□□ -0.57
GTF3C1-203ENST00000562609 RPL30P62888 115 aaKnown RBP11.51□□□□□ -0.57
GTF3C1-203ENST00000562609 NHLRC2Q8NBF2 726 aa11.51□□□□□ -0.57
GTF3C1-203ENST00000562609 POM121L2Q96KW2 1035 aa11.51□□□□□ -0.57
GTF3C1-203ENST00000562609 IGHV1-24A0A0C4DH33 117 aa11.51□□□□□ -0.57
GTF3C1-203ENST00000562609 CA6P23280 308 aa11.51□□□□□ -0.57
GTF3C1-203ENST00000562609 MC5RP33032 325 aa11.51□□□□□ -0.57
GTF3C1-203ENST00000562609 EFNB3Q15768 340 aa11.51□□□□□ -0.57
GTF3C1-203ENST00000562609 USF3Q68DE3 2245 aa11.51□□□□□ -0.57
GTF3C1-203ENST00000562609 H2BFWTQ7Z2G1 175 aa11.51□□□□□ -0.57
GTF3C1-203ENST00000562609 ZNF808Q8N4W9 903 aaPredicted RBP11.51□□□□□ -0.57
GTF3C1-203ENST00000562609 RAB37Q96AX2 223 aa11.51□□□□□ -0.57
GTF3C1-203ENST00000562609 MS4A5Q9H3V2 200 aa11.51□□□□□ -0.57
GTF3C1-203ENST00000562609 HILPDAQ9Y5L2 63 aa11.51□□□□□ -0.57
GTF3C1-203ENST00000562609 SPCS1Q9Y6A9 102 aa11.51□□□□□ -0.57
GTF3C1-203ENST00000562609 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.5□□□□□ -0.57
GTF3C1-203ENST00000562609 NPIPB11E5RHQ5 1161 aa11.5□□□□□ -0.57
GTF3C1-203ENST00000562609 PLP2Q04941 152 aa11.5□□□□□ -0.57
GTF3C1-203ENST00000562609 RAB31Q13636 194 aa11.5□□□□□ -0.57
GTF3C1-203ENST00000562609 MDP1Q86V88 176 aa11.5□□□□□ -0.57
GTF3C1-203ENST00000562609 WIPF2Q8TF74 440 aaPredicted RBP11.5□□□□□ -0.57
GTF3C1-203ENST00000562609 ZNF48Q96MX3 618 aaPredicted RBP11.5□□□□□ -0.57
GTF3C1-203ENST00000562609 TRIB1Q96RU8 372 aa11.5□□□□□ -0.57
GTF3C1-203ENST00000562609 MS4A6AQ9H2W1 248 aa11.5□□□□□ -0.57
GTF3C1-203ENST00000562609 BSNQ9UPA5 3926 aa11.5□□□□□ -0.57
GTF3C1-203ENST00000562609 F2RL2O00254 374 aa11.5□□□□□ -0.57
GTF3C1-203ENST00000562609 CNEP1R1Q8N9A8 125 aa11.5□□□□□ -0.57
GTF3C1-203ENST00000562609 OR52E5Q8NH55 327 aa11.5□□□□□ -0.57
GTF3C1-203ENST00000562609 GCM1Q9NP62 436 aa11.5□□□□□ -0.57
GTF3C1-203ENST00000562609 DLL3Q9NYJ7 618 aa11.5□□□□□ -0.57
GTF3C1-203ENST00000562609 ADGRG4Q8IZF6 3080 aa11.5□□□□□ -0.57
GTF3C1-203ENST00000562609 A6NDN8 102 aa11.5□□□□□ -0.57
GTF3C1-203ENST00000562609 IGLV2-8P01709 118 aa11.5□□□□□ -0.57
GTF3C1-203ENST00000562609 AREGP15514 252 aa11.5□□□□□ -0.57
GTF3C1-203ENST00000562609 TCF15Q12870 199 aa11.5□□□□□ -0.57
GTF3C1-203ENST00000562609 NRN1LQ496H8 165 aa11.5□□□□□ -0.57
GTF3C1-203ENST00000562609 VSTM2AQ8TAG5 236 aa11.5□□□□□ -0.57
GTF3C1-203ENST00000562609 HEATR1Q9H583 2144 aaKnown RBP11.5□□□□□ -0.57
GTF3C1-203ENST00000562609 ZNF355PQ9NSJ1 428 aa11.5□□□□□ -0.57
GTF3C1-203ENST00000562609 C17orf98A8MV24 154 aa11.49□□□□□ -0.57
GTF3C1-203ENST00000562609 AGFG2O95081 481 aa11.49□□□□□ -0.57
GTF3C1-203ENST00000562609 COX8AP10176 69 aa11.49□□□□□ -0.57
GTF3C1-203ENST00000562609 FOXA3P55318 350 aaPredicted RBP11.49□□□□□ -0.57
GTF3C1-203ENST00000562609 RASL11AQ6T310 242 aa11.49□□□□□ -0.57
GTF3C1-203ENST00000562609 ZNF788Q6ZQV5 615 aa11.49□□□□□ -0.57
GTF3C1-203ENST00000562609 OR5A1Q8NGJ0 315 aa11.49□□□□□ -0.57
GTF3C1-203ENST00000562609 TRAPPC2LQ9UL33 140 aa11.49□□□□□ -0.57
GTF3C1-203ENST00000562609 CACNA1DQ01668 2161 aa11.49□□□□□ -0.57
GTF3C1-203ENST00000562609 PCNX1Q96RV3 2341 aa11.49□□□□□ -0.57
GTF3C1-203ENST00000562609 PTPRBP23467 1997 aa11.49□□□□□ -0.57
GTF3C1-203ENST00000562609 KIR3DS1Q14943 382 aa11.49□□□□□ -0.57
GTF3C1-203ENST00000562609 BHLHA15Q7RTS1 189 aaPredicted RBP11.49□□□□□ -0.57
GTF3C1-203ENST00000562609 NUP35Q8NFH5 326 aa11.49□□□□□ -0.57
GTF3C1-203ENST00000562609 TSSC4Q9Y5U2 329 aaPredicted RBP11.49□□□□□ -0.57
GTF3C1-203ENST00000562609 PSMB11A5LHX3 300 aa11.48□□□□□ -0.57
GTF3C1-203ENST00000562609 ACTL6BO94805 426 aa11.48□□□□□ -0.57
GTF3C1-203ENST00000562609 PSG5Q15238 335 aa11.48□□□□□ -0.57
GTF3C1-203ENST00000562609 MAP1LC3CQ9BXW4 147 aa11.48□□□□□ -0.57
GTF3C1-203ENST00000562609 GAGE12HA6NDE8 117 aa11.48□□□□□ -0.57
GTF3C1-203ENST00000562609 OR2J3O76001 311 aa11.48□□□□□ -0.57
GTF3C1-203ENST00000562609 TIMM8BQ9Y5J9 83 aaPredicted RBP11.48□□□□□ -0.57
GTF3C1-203ENST00000562609 CD24P25063 80 aa11.47□□□□□ -0.57
GTF3C1-203ENST00000562609 TPRX1Q8N7U7 411 aa11.47□□□□□ -0.57
GTF3C1-203ENST00000562609 RELNP78509 3460 aa11.47□□□□□ -0.57
GTF3C1-203ENST00000562609 A0A1W2PPM0 123 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms