RNA–Protein interactions for RNA: ENST00000562303.5

RPAP1-204, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 5,897 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-204ENST00000562303 LOC102723996A0A087X1L8 192 aa9.35□□□□□ -0.91
RPAP1-204ENST00000562303 RCHY1Q96PM5 261 aa9.35□□□□□ -0.91
RPAP1-204ENST00000562303 SPAG8Q99932 426 aaPredicted RBP9.35□□□□□ -0.91
RPAP1-204ENST00000562303 RNASE7Q9H1E1 156 aaKnown RBP9.35□□□□□ -0.91
RPAP1-204ENST00000562303 MYO16Q9Y6X6 1858 aa9.35□□□□□ -0.91
RPAP1-204ENST00000562303 CABIN1Q9Y6J0 2220 aa9.35□□□□□ -0.91
RPAP1-204ENST00000562303 PINLYPA6NC86 204 aa9.35□□□□□ -0.91
RPAP1-204ENST00000562303 B4DSR2 109 aa9.35□□□□□ -0.91
RPAP1-204ENST00000562303 RIPPLY3P57055 190 aa9.35□□□□□ -0.91
RPAP1-204ENST00000562303 MTURNQ8N3F0 131 aa9.35□□□□□ -0.91
RPAP1-204ENST00000562303 CD59P13987 128 aa9.34□□□□□ -0.91
RPAP1-204ENST00000562303 EVI2AP22794 236 aa9.34□□□□□ -0.91
RPAP1-204ENST00000562303 OR2K2Q8NGT1 345 aa9.34□□□□□ -0.91
RPAP1-204ENST00000562303 FOXF2Q12947 444 aa9.34□□□□□ -0.91
RPAP1-204ENST00000562303 FOCADQ5VW36 1801 aa9.34□□□□□ -0.91
RPAP1-204ENST00000562303 IGLV3-12A0A075B6K2 115 aa9.34□□□□□ -0.91
RPAP1-204ENST00000562303 COQ2Q96H96 371 aa9.34□□□□□ -0.91
RPAP1-204ENST00000562303 SSBP4Q9BWG4 385 aaPredicted RBP9.34□□□□□ -0.91
RPAP1-204ENST00000562303 JPT2Q9H910 190 aa9.34□□□□□ -0.91
RPAP1-204ENST00000562303 TDRD15B5MCY1 1934 aaKnown RBP9.34□□□□□ -0.91
RPAP1-204ENST00000562303 IGHV3-73A0A0B4J1V6 119 aa9.34□□□□□ -0.91
RPAP1-204ENST00000562303 A0A1B0GTI1 187 aa9.34□□□□□ -0.91
RPAP1-204ENST00000562303 RAMP3O60896 148 aa9.34□□□□□ -0.91
RPAP1-204ENST00000562303 SRP19P09132 144 aaKnown RBP9.34□□□□□ -0.91
RPAP1-204ENST00000562303 NHLRC3Q5JS37 347 aa9.34□□□□□ -0.91
RPAP1-204ENST00000562303 UNQ6494/PRO21346Q6UXR6 183 aa9.34□□□□□ -0.91
RPAP1-204ENST00000562303 TNFRSF14Q92956 283 aa9.34□□□□□ -0.91
RPAP1-204ENST00000562303 IGHV3-64A0A075B6Q5 118 aa9.34□□□□□ -0.91
RPAP1-204ENST00000562303 HBDP02042 147 aa9.34□□□□□ -0.91
RPAP1-204ENST00000562303 LINC00271P0C7V0 271 aa9.34□□□□□ -0.91
RPAP1-204ENST00000562303 EFNB1P98172 346 aa9.34□□□□□ -0.91
RPAP1-204ENST00000562303 ZFP36L1Q07352 338 aaKnown RBP9.34□□□□□ -0.91
RPAP1-204ENST00000562303 KLRD1Q13241 179 aa9.34□□□□□ -0.91
RPAP1-204ENST00000562303 SFTA2Q6UW10 78 aa9.34□□□□□ -0.91
RPAP1-204ENST00000562303 TDRD6O60522 2096 aaKnown RBP9.34□□□□□ -0.91
RPAP1-204ENST00000562303 CHTOPQ9Y3Y2 248 aaKnown RBP9.33□□□□□ -0.92
RPAP1-204ENST00000562303 SPCS1Q9Y6A9 102 aa9.33□□□□□ -0.92
RPAP1-204ENST00000562303 IGHV2-26A0A0B4J1V2 119 aa9.33□□□□□ -0.92
RPAP1-204ENST00000562303 PRB4P10163 310 aaPredicted RBP9.33□□□□□ -0.92
RPAP1-204ENST00000562303 ORMDL2Q53FV1 153 aa9.33□□□□□ -0.92
RPAP1-204ENST00000562303 TRGV1A0A0A0MS02 117 aa9.33□□□□□ -0.92
RPAP1-204ENST00000562303 IGKV1D-13A0A0B4J2D9 117 aa9.33□□□□□ -0.92
RPAP1-204ENST00000562303 IGKV1-13P0DP09 117 aa9.33□□□□□ -0.92
RPAP1-204ENST00000562303 PRCDQ00LT1 54 aa9.33□□□□□ -0.92
RPAP1-204ENST00000562303 BRD3OSQ6XYD6 125 aa9.33□□□□□ -0.92
RPAP1-204ENST00000562303 ZNF646O15015 1829 aaPredicted RBP9.33□□□□□ -0.92
RPAP1-204ENST00000562303 TRAV9-1A0A075B6T8 112 aa9.33□□□□□ -0.92
RPAP1-204ENST00000562303 PLNP26678 52 aa9.33□□□□□ -0.92
RPAP1-204ENST00000562303 LY75O60449 1722 aa9.33□□□□□ -0.92
RPAP1-204ENST00000562303 H3BUX3 64 aa9.33□□□□□ -0.92
RPAP1-204ENST00000562303 IGHV3-53P01767 116 aa9.33□□□□□ -0.92
RPAP1-204ENST00000562303 TIMP3P35625 211 aa9.33□□□□□ -0.92
RPAP1-204ENST00000562303 C15orf32Q32M92 178 aa9.33□□□□□ -0.92
RPAP1-204ENST00000562303 MLNRO43193 412 aa9.32□□□□□ -0.92
RPAP1-204ENST00000562303 CRIM1Q9NZV1 1036 aa9.32□□□□□ -0.92
RPAP1-204ENST00000562303 GGTLC3B5MD39 225 aa9.32□□□□□ -0.92
RPAP1-204ENST00000562303 DPM2O94777 84 aa9.32□□□□□ -0.92
RPAP1-204ENST00000562303 CCL20P78556 96 aa9.32□□□□□ -0.92
RPAP1-204ENST00000562303 DOCK5Q9H7D0 1870 aa9.32□□□□□ -0.92
RPAP1-204ENST00000562303 TRAV8-2A0A0B4J237 113 aa9.32□□□□□ -0.92
RPAP1-204ENST00000562303 TMEM8BA6NDV4 472 aa9.32□□□□□ -0.92
RPAP1-204ENST00000562303 PGPEP1LA6NFU8 196 aa9.32□□□□□ -0.92
RPAP1-204ENST00000562303 MPTX1A8MV57 137 aa9.32□□□□□ -0.92
RPAP1-204ENST00000562303 FXYD7P58549 80 aa9.32□□□□□ -0.92
RPAP1-204ENST00000562303 DTX1Q86Y01 620 aa9.32□□□□□ -0.92
RPAP1-204ENST00000562303 C18orf12Q96KH6 178 aa9.32□□□□□ -0.92
RPAP1-204ENST00000562303 LYZL4Q96KX0 146 aa9.32□□□□□ -0.92
RPAP1-204ENST00000562303 SEC16AO15027 2179 aa9.32□□□□□ -0.92
RPAP1-204ENST00000562303 IL18BPO95998 194 aa9.31□□□□□ -0.92
RPAP1-204ENST00000562303 CA1P00915 261 aaPredicted RBP9.31□□□□□ -0.92
RPAP1-204ENST00000562303 LINC00114Q6XXX2 140 aa9.31□□□□□ -0.92
RPAP1-204ENST00000562303 LHFPL4Q7Z7J7 247 aa9.31□□□□□ -0.92
RPAP1-204ENST00000562303 KLHL30-AS1Q8NEE0 82 aa9.31□□□□□ -0.92
RPAP1-204ENST00000562303 CD55P08174 381 aa9.31□□□□□ -0.92
RPAP1-204ENST00000562303 RPL15P61313 204 aaKnown RBP9.31□□□□□ -0.92
RPAP1-204ENST00000562303 ACTL10Q5JWF8 245 aa9.31□□□□□ -0.92
RPAP1-204ENST00000562303 MORN3Q6PF18 240 aaPredicted RBP9.31□□□□□ -0.92
RPAP1-204ENST00000562303 OR10W1Q8NGF6 305 aa9.31□□□□□ -0.92
RPAP1-204ENST00000562303 MBNL3Q9NUK0 354 aaKnown RBP9.31□□□□□ -0.92
RPAP1-204ENST00000562303 DUTP33316 252 aaKnown RBP9.31□□□□□ -0.92
RPAP1-204ENST00000562303 LCNL1Q6ZST4 164 aa9.31□□□□□ -0.92
RPAP1-204ENST00000562303 LAMB2P55268 1798 aa9.31□□□□□ -0.92
RPAP1-204ENST00000562303 COL4A5P29400 1685 aa9.31□□□□□ -0.92
RPAP1-204ENST00000562303 RPL36AP83881 106 aaKnown RBP9.31□□□□□ -0.92
RPAP1-204ENST00000562303 RPL36ALQ969Q0 106 aaKnown RBP9.31□□□□□ -0.92
RPAP1-204ENST00000562303 DMRT1Q9Y5R6 373 aa9.31□□□□□ -0.92
RPAP1-204ENST00000562303 SNRNP200O75643 2136 aaKnown RBP9.31□□□□□ -0.92
RPAP1-204ENST00000562303 F2Z2F3 143 aa9.31□□□□□ -0.92
RPAP1-204ENST00000562303 ERVH48-1M5A8F1 160 aa9.31□□□□□ -0.92
RPAP1-204ENST00000562303 PPBPP02775 128 aa9.31□□□□□ -0.92
RPAP1-204ENST00000562303 TPTE2P1Q5T6R2 138 aa9.31□□□□□ -0.92
RPAP1-204ENST00000562303 PIP4P2Q8N4L2 257 aa9.31□□□□□ -0.92
RPAP1-204ENST00000562303 MDC1Q14676 2089 aaKnown RBP9.3□□□□□ -0.92
RPAP1-204ENST00000562303 IGKV2-40A0A087WW87 121 aaPredicted RBP9.3□□□□□ -0.92
RPAP1-204ENST00000562303 A0A1B0GV90 55 aa9.3□□□□□ -0.92
RPAP1-204ENST00000562303 IGKV2D-40P01614 121 aaPredicted RBP9.3□□□□□ -0.92
RPAP1-204ENST00000562303 SLC25A2Q9BXI2 301 aa9.3□□□□□ -0.92
RPAP1-204ENST00000562303 RNF114Q9Y508 228 aa9.3□□□□□ -0.92
RPAP1-204ENST00000562303 NPIPB5A8MRT5 1133 aa9.3□□□□□ -0.92
RPAP1-204ENST00000562303 CD5P06127 495 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms