RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 MLANAQ16655 118 aa12.15□□□□□ -0.46
VPS9D1-AS1-201ENST00000562298 TRPT1Q86TN4 253 aaKnown RBP12.15□□□□□ -0.46
VPS9D1-AS1-201ENST00000562298 PCLOQ9Y6V0 5065 aa12.15□□□□□ -0.46
VPS9D1-AS1-201ENST00000562298 C3orf85A0A1B0GTC6 90 aa12.14□□□□□ -0.47
VPS9D1-AS1-201ENST00000562298 K7EQG2 157 aa12.14□□□□□ -0.47
VPS9D1-AS1-201ENST00000562298 CORTO00230 105 aa12.14□□□□□ -0.47
VPS9D1-AS1-201ENST00000562298 CLN5O75503 358 aa12.14□□□□□ -0.47
VPS9D1-AS1-201ENST00000562298 TNFAIP8O95379 198 aa12.14□□□□□ -0.47
VPS9D1-AS1-201ENST00000562298 CD3DP04234 171 aa12.14□□□□□ -0.47
VPS9D1-AS1-201ENST00000562298 NPPCP23582 126 aa12.14□□□□□ -0.47
VPS9D1-AS1-201ENST00000562298 HOXA1P49639 335 aaPredicted RBP12.14□□□□□ -0.47
VPS9D1-AS1-201ENST00000562298 PPP5CP53041 499 aa12.14□□□□□ -0.47
VPS9D1-AS1-201ENST00000562298 SP6Q3SY56 376 aa12.14□□□□□ -0.47
VPS9D1-AS1-201ENST00000562298 RNASE10Q5GAN6 216 aaKnown RBP12.14□□□□□ -0.47
VPS9D1-AS1-201ENST00000562298 STHQ8IWL8 128 aa12.14□□□□□ -0.47
VPS9D1-AS1-201ENST00000562298 ARRDC1Q8N5I2 433 aa12.14□□□□□ -0.47
VPS9D1-AS1-201ENST00000562298 OR4D10Q8NGI6 311 aa12.14□□□□□ -0.47
VPS9D1-AS1-201ENST00000562298 TMEM231Q9H6L2 316 aa12.14□□□□□ -0.47
VPS9D1-AS1-201ENST00000562298 RBMY1A1P0DJD3 496 aaKnown RBP12.13□□□□□ -0.47
VPS9D1-AS1-201ENST00000562298 RBMY1CP0DJD4 496 aa12.13□□□□□ -0.47
VPS9D1-AS1-201ENST00000562298 C4BPBP20851 252 aa12.13□□□□□ -0.47
VPS9D1-AS1-201ENST00000562298 CRYBB3P26998 211 aa12.13□□□□□ -0.47
VPS9D1-AS1-201ENST00000562298 OPRK1P41145 380 aa12.13□□□□□ -0.47
VPS9D1-AS1-201ENST00000562298 SUB1P53999 127 aaKnown RBP eCLIP12.13□□□□□ -0.47
VPS9D1-AS1-201ENST00000562298 RBMY1FQ15415 496 aaKnown RBP12.13□□□□□ -0.47
VPS9D1-AS1-201ENST00000562298 BSXQ3C1V8 233 aa12.13□□□□□ -0.47
VPS9D1-AS1-201ENST00000562298 STXBP6Q8NFX7 210 aa12.13□□□□□ -0.47
VPS9D1-AS1-201ENST00000562298 OR4X1Q8NH49 305 aa12.13□□□□□ -0.47
VPS9D1-AS1-201ENST00000562298 OR52I2Q8NH67 350 aa12.13□□□□□ -0.47
VPS9D1-AS1-201ENST00000562298 PDCD10Q9BUL8 212 aa12.13□□□□□ -0.47
VPS9D1-AS1-201ENST00000562298 APLNQ9ULZ1 77 aa12.13□□□□□ -0.47
VPS9D1-AS1-201ENST00000562298 IGHV4-28A0A0C4DH34 117 aa12.12□□□□□ -0.47
VPS9D1-AS1-201ENST00000562298 A0A1W2PS18 150 aa12.12□□□□□ -0.47
VPS9D1-AS1-201ENST00000562298 KNCNA6PVL3 124 aa12.12□□□□□ -0.47
VPS9D1-AS1-201ENST00000562298 FAM25AB3EWG3 89 aa12.12□□□□□ -0.47
VPS9D1-AS1-201ENST00000562298 FAM25CB3EWG5 89 aa12.12□□□□□ -0.47
VPS9D1-AS1-201ENST00000562298 FAM25GB3EWG6 89 aa12.12□□□□□ -0.47
VPS9D1-AS1-201ENST00000562298 IGKV1-17P01599 117 aa12.12□□□□□ -0.47
VPS9D1-AS1-201ENST00000562298 UCP1P25874 307 aa12.12□□□□□ -0.47
VPS9D1-AS1-201ENST00000562298 P2RY1P47900 373 aa12.12□□□□□ -0.47
VPS9D1-AS1-201ENST00000562298 TCTAP57738 103 aa12.12□□□□□ -0.47
VPS9D1-AS1-201ENST00000562298 TRIM16LQ309B1 348 aa12.12□□□□□ -0.47
VPS9D1-AS1-201ENST00000562298 Q6ZRM9 215 aa12.12□□□□□ -0.47
VPS9D1-AS1-201ENST00000562298 DCANP1Q8TF63 244 aa12.12□□□□□ -0.47
VPS9D1-AS1-201ENST00000562298 GRAMD2BQ96HH9 432 aa12.12□□□□□ -0.47
VPS9D1-AS1-201ENST00000562298 METTL26Q96S19 204 aa12.12□□□□□ -0.47
VPS9D1-AS1-201ENST00000562298 HRH4Q9H3N8 390 aa12.12□□□□□ -0.47
VPS9D1-AS1-201ENST00000562298 MTFP1Q9UDX5 166 aa12.12□□□□□ -0.47
VPS9D1-AS1-201ENST00000562298 IGLL5B9A064 214 aa12.11□□□□□ -0.47
VPS9D1-AS1-201ENST00000562298 ATG12O94817 140 aa12.11□□□□□ -0.47
VPS9D1-AS1-201ENST00000562298 ZNF688P0C7X2 276 aa12.11□□□□□ -0.47
VPS9D1-AS1-201ENST00000562298 TBPP20226 339 aa12.11□□□□□ -0.47
VPS9D1-AS1-201ENST00000562298 RPL5P46777 297 aaKnown RBP12.11□□□□□ -0.47
VPS9D1-AS1-201ENST00000562298 RORCP51449 518 aa12.11□□□□□ -0.47
VPS9D1-AS1-201ENST00000562298 TIGITQ495A1 244 aa12.11□□□□□ -0.47
VPS9D1-AS1-201ENST00000562298 OR13C8Q8NGS7 320 aa12.11□□□□□ -0.47
VPS9D1-AS1-201ENST00000562298 ABHD1Q96SE0 405 aa12.11□□□□□ -0.47
VPS9D1-AS1-201ENST00000562298 ENY2Q9NPA8 101 aa12.11□□□□□ -0.47
VPS9D1-AS1-201ENST00000562298 COPZ2Q9P299 210 aa12.11□□□□□ -0.47
VPS9D1-AS1-201ENST00000562298 X6R8D5 127 aa12.11□□□□□ -0.47
VPS9D1-AS1-201ENST00000562298 KIAA1109Q2LD37 5005 aa12.11□□□□□ -0.47
VPS9D1-AS1-201ENST00000562298 ZNF705EA8MWA4 302 aaPredicted RBP12.1□□□□□ -0.47
VPS9D1-AS1-201ENST00000562298 SPP1P10451 314 aa12.1□□□□□ -0.47
VPS9D1-AS1-201ENST00000562298 AARDQ4LEZ3 155 aa12.1□□□□□ -0.47
VPS9D1-AS1-201ENST00000562298 MORN3Q6PF18 240 aaPredicted RBP12.1□□□□□ -0.47
VPS9D1-AS1-201ENST00000562298 CCDC71LQ8N9Z2 235 aa12.1□□□□□ -0.47
VPS9D1-AS1-201ENST00000562298 TERB2Q8NHR7 220 aa12.1□□□□□ -0.47
VPS9D1-AS1-201ENST00000562298 TMEM230Q96A57 120 aa12.1□□□□□ -0.47
VPS9D1-AS1-201ENST00000562298 RRNAD1Q96FB5 475 aaKnown RBP12.1□□□□□ -0.47
VPS9D1-AS1-201ENST00000562298 EXTL2Q9UBQ6 330 aa12.1□□□□□ -0.47
VPS9D1-AS1-201ENST00000562298 DNAH2Q9P225 4427 aa12.1□□□□□ -0.47
VPS9D1-AS1-201ENST00000562298 FAT2Q9NYQ8 4349 aa12.1□□□□□ -0.47
VPS9D1-AS1-201ENST00000562298 ELOA3CA0A087WX78 387 aaPredicted RBP12.09□□□□□ -0.47
VPS9D1-AS1-201ENST00000562298 C11orf94C9JXX5 98 aa12.09□□□□□ -0.47
VPS9D1-AS1-201ENST00000562298 CD74P04233 296 aa12.09□□□□□ -0.47
VPS9D1-AS1-201ENST00000562298 MIFP14174 115 aa12.09□□□□□ -0.47
VPS9D1-AS1-201ENST00000562298 SCGB2B2Q4G0G5 96 aa12.09□□□□□ -0.47
VPS9D1-AS1-201ENST00000562298 TMEM41BQ5BJD5 291 aa12.09□□□□□ -0.47
VPS9D1-AS1-201ENST00000562298 ACTL10Q5JWF8 245 aa12.09□□□□□ -0.47
VPS9D1-AS1-201ENST00000562298 MZT2AQ6P582 158 aa12.09□□□□□ -0.47
VPS9D1-AS1-201ENST00000562298 CSNK1G2-AS1Q8NCQ2 148 aa12.09□□□□□ -0.47
VPS9D1-AS1-201ENST00000562298 RNASE11Q8TAA1 199 aaKnown RBP12.09□□□□□ -0.47
VPS9D1-AS1-201ENST00000562298 LHFPL5Q8TAF8 219 aa12.09□□□□□ -0.47
VPS9D1-AS1-201ENST00000562298 ZFAND1Q8TCF1 268 aa12.09□□□□□ -0.47
VPS9D1-AS1-201ENST00000562298 MARCH1Q8TCQ1 289 aa12.09□□□□□ -0.47
VPS9D1-AS1-201ENST00000562298 NAA50Q9GZZ1 169 aaKnown RBP12.09□□□□□ -0.47
VPS9D1-AS1-201ENST00000562298 CLEC5AQ9NY25 188 aa12.09□□□□□ -0.47
VPS9D1-AS1-201ENST00000562298 U3KQE9 123 aa12.09□□□□□ -0.47
VPS9D1-AS1-201ENST00000562298 AGRNO00468 2067 aa12.09□□□□□ -0.47
VPS9D1-AS1-201ENST00000562298 CDS2O95674 445 aa12.08□□□□□ -0.48
VPS9D1-AS1-201ENST00000562298 OR5AC1P0C628 307 aa12.08□□□□□ -0.48
VPS9D1-AS1-201ENST00000562298 HLA-DMBP28068 263 aa12.08□□□□□ -0.48
VPS9D1-AS1-201ENST00000562298 SPCS3P61009 180 aa12.08□□□□□ -0.48
VPS9D1-AS1-201ENST00000562298 CTF1Q16619 201 aa12.08□□□□□ -0.48
VPS9D1-AS1-201ENST00000562298 Q6ZTC4 211 aa12.08□□□□□ -0.48
VPS9D1-AS1-201ENST00000562298 TMEM229BQ8NBD8 167 aa12.08□□□□□ -0.48
VPS9D1-AS1-201ENST00000562298 TMEM222Q9H0R3 208 aa12.08□□□□□ -0.48
VPS9D1-AS1-201ENST00000562298 TRAV30A0A087WSZ9 112 aa12.07□□□□□ -0.48
VPS9D1-AS1-201ENST00000562298 SCGB2A1O75556 95 aa12.07□□□□□ -0.48
VPS9D1-AS1-201ENST00000562298 B3GALNT1O75752 331 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms