RNA–Protein interactions for RNA: ENST00000561945.1

SPG7-205, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 411 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-205ENST00000561945 GBGT1Q8N5D6 347 aa10.59□□□□□ -0.71
SPG7-205ENST00000561945 FAM24BQ8N5W8 94 aa10.59□□□□□ -0.71
SPG7-205ENST00000561945 C2CD4CQ8TF44 421 aa10.59□□□□□ -0.71
SPG7-205ENST00000561945 PINX1Q96BK5 328 aaKnown RBP10.59□□□□□ -0.71
SPG7-205ENST00000561945 GRAMD2BQ96HH9 432 aa10.59□□□□□ -0.71
SPG7-205ENST00000561945 IGKV3-7A0A075B6H7 116 aa10.58□□□□□ -0.72
SPG7-205ENST00000561945 C11orf94C9JXX5 98 aa10.58□□□□□ -0.72
SPG7-205ENST00000561945 IFNA4P05014 189 aa10.58□□□□□ -0.72
SPG7-205ENST00000561945 RNASE2P10153 161 aaKnown RBP10.58□□□□□ -0.72
SPG7-205ENST00000561945 CRYBB3P26998 211 aa10.58□□□□□ -0.72
SPG7-205ENST00000561945 DEFB131AP59861 70 aa10.58□□□□□ -0.72
SPG7-205ENST00000561945 TRPT1Q86TN4 253 aaKnown RBP10.58□□□□□ -0.72
SPG7-205ENST00000561945 TMEM231Q9H6L2 316 aa10.58□□□□□ -0.72
SPG7-205ENST00000561945 APLNQ9ULZ1 77 aa10.58□□□□□ -0.72
SPG7-205ENST00000561945 ZNF705EA8MWA4 302 aaPredicted RBP10.57□□□□□ -0.72
SPG7-205ENST00000561945 FAM25AB3EWG3 89 aa10.57□□□□□ -0.72
SPG7-205ENST00000561945 FAM25CB3EWG5 89 aa10.57□□□□□ -0.72
SPG7-205ENST00000561945 FAM25GB3EWG6 89 aa10.57□□□□□ -0.72
SPG7-205ENST00000561945 K7EQG2 157 aa10.57□□□□□ -0.72
SPG7-205ENST00000561945 CLN5O75503 358 aa10.57□□□□□ -0.72
SPG7-205ENST00000561945 IZUMO4Q1ZYL8 232 aa10.57□□□□□ -0.72
SPG7-205ENST00000561945 LEMD1Q68G75 181 aa10.57□□□□□ -0.72
SPG7-205ENST00000561945 ARRDC1Q8N5I2 433 aa10.57□□□□□ -0.72
SPG7-205ENST00000561945 OR4X1Q8NH49 305 aa10.57□□□□□ -0.72
SPG7-205ENST00000561945 TP53RKQ96S44 253 aa10.57□□□□□ -0.72
SPG7-205ENST00000561945 FNDC4Q9H6D8 234 aaPredicted RBP10.57□□□□□ -0.72
SPG7-205ENST00000561945 FBXL17Q9UF56 701 aa10.57□□□□□ -0.72
SPG7-205ENST00000561945 PKD1P98161 4303 aa10.57□□□□□ -0.72
SPG7-205ENST00000561945 A0A1W2PS18 150 aa10.56□□□□□ -0.72
SPG7-205ENST00000561945 DNASE2O00115 360 aaPredicted RBP10.56□□□□□ -0.72
SPG7-205ENST00000561945 HPGDSO60760 199 aa10.56□□□□□ -0.72
SPG7-205ENST00000561945 SPP1P10451 314 aa10.56□□□□□ -0.72
SPG7-205ENST00000561945 MIFP14174 115 aa10.56□□□□□ -0.72
SPG7-205ENST00000561945 ELK1P19419 428 aa10.56□□□□□ -0.72
SPG7-205ENST00000561945 SNCAP37840 140 aa10.56□□□□□ -0.72
SPG7-205ENST00000561945 MORN3Q6PF18 240 aaPredicted RBP10.56□□□□□ -0.72
SPG7-205ENST00000561945 SNX29P2Q8IUI4 249 aa10.56□□□□□ -0.72
SPG7-205ENST00000561945 CSNK1G2-AS1Q8NCQ2 148 aa10.56□□□□□ -0.72
SPG7-205ENST00000561945 DCANP1Q8TF63 244 aa10.56□□□□□ -0.72
SPG7-205ENST00000561945 MRPL36Q9P0J6 103 aaKnown RBP10.56□□□□□ -0.72
SPG7-205ENST00000561945 U3KQE9 123 aa10.56□□□□□ -0.72
SPG7-205ENST00000561945 B3GALNT1O75752 331 aa10.55□□□□□ -0.72
SPG7-205ENST00000561945 ATG12O94817 140 aa10.55□□□□□ -0.72
SPG7-205ENST00000561945 RBMY1A1P0DJD3 496 aaKnown RBP10.55□□□□□ -0.72
SPG7-205ENST00000561945 RBMY1CP0DJD4 496 aa10.55□□□□□ -0.72
SPG7-205ENST00000561945 TBPP20226 339 aa10.55□□□□□ -0.72
SPG7-205ENST00000561945 NPPCP23582 126 aa10.55□□□□□ -0.72
SPG7-205ENST00000561945 UCP1P25874 307 aa10.55□□□□□ -0.72
SPG7-205ENST00000561945 SUB1P53999 127 aaKnown RBP eCLIP10.55□□□□□ -0.72
SPG7-205ENST00000561945 PIGPP57054 158 aa10.55□□□□□ -0.72
SPG7-205ENST00000561945 SPCS2Q15005 226 aa10.55□□□□□ -0.72
SPG7-205ENST00000561945 RBMY1FQ15415 496 aaKnown RBP10.55□□□□□ -0.72
SPG7-205ENST00000561945 SPINK9Q5DT21 86 aa10.55□□□□□ -0.72
SPG7-205ENST00000561945 STHQ8IWL8 128 aa10.55□□□□□ -0.72
SPG7-205ENST00000561945 SLC35G3Q8N808 338 aa10.55□□□□□ -0.72
SPG7-205ENST00000561945 C15orf40Q8WUR7 153 aa10.55□□□□□ -0.72
SPG7-205ENST00000561945 X6R8D5 127 aa10.55□□□□□ -0.72
SPG7-205ENST00000561945 IGHV3-66A0A0C4DH42 116 aa10.54□□□□□ -0.72
SPG7-205ENST00000561945 C3orf85A0A1B0GTC6 90 aa10.54□□□□□ -0.72
SPG7-205ENST00000561945 M0QYG6 137 aa10.54□□□□□ -0.72
SPG7-205ENST00000561945 DEFB4AO15263 64 aa10.54□□□□□ -0.72
SPG7-205ENST00000561945 IGKV1-17P01599 117 aa10.54□□□□□ -0.72
SPG7-205ENST00000561945 OR52E5Q8NH55 327 aa10.54□□□□□ -0.72
SPG7-205ENST00000561945 METTL26Q96S19 204 aa10.54□□□□□ -0.72
SPG7-205ENST00000561945 KLK11Q9UBX7 282 aa10.54□□□□□ -0.72
SPG7-205ENST00000561945 TRAV30A0A087WSZ9 112 aa10.53□□□□□ -0.72
SPG7-205ENST00000561945 IGHV4-28A0A0C4DH34 117 aa10.53□□□□□ -0.72
SPG7-205ENST00000561945 A0A0G2JRQ6 117 aa10.53□□□□□ -0.72
SPG7-205ENST00000561945 CCDC160A6NGH7 325 aa10.53□□□□□ -0.72
SPG7-205ENST00000561945 RGS5O15539 181 aa10.53□□□□□ -0.72
SPG7-205ENST00000561945 IFNA17P01571 189 aa10.53□□□□□ -0.72
SPG7-205ENST00000561945 CD74P04233 296 aa10.53□□□□□ -0.72
SPG7-205ENST00000561945 PI3P19957 117 aa10.53□□□□□ -0.72
SPG7-205ENST00000561945 C4BPBP20851 252 aa10.53□□□□□ -0.72
SPG7-205ENST00000561945 ETV6P41212 452 aa10.53□□□□□ -0.72
SPG7-205ENST00000561945 P2RY1P47900 373 aa10.53□□□□□ -0.72
SPG7-205ENST00000561945 AKR1C2P52895 323 aa10.53□□□□□ -0.72
SPG7-205ENST00000561945 RNASE10Q5GAN6 216 aaKnown RBP10.53□□□□□ -0.72
SPG7-205ENST00000561945 MTFP1Q9UDX5 166 aa10.53□□□□□ -0.72
SPG7-205ENST00000561945 AGRNO00468 2067 aa10.53□□□□□ -0.72
SPG7-205ENST00000561945 SCGB2A1O75556 95 aa10.52□□□□□ -0.73
SPG7-205ENST00000561945 CDS2O95674 445 aa10.52□□□□□ -0.73
SPG7-205ENST00000561945 CD3DP04234 171 aa10.52□□□□□ -0.73
SPG7-205ENST00000561945 PGAM2P15259 253 aa10.52□□□□□ -0.73
SPG7-205ENST00000561945 OPRK1P41145 380 aa10.52□□□□□ -0.73
SPG7-205ENST00000561945 PPP5CP53041 499 aa10.52□□□□□ -0.73
SPG7-205ENST00000561945 RPL11P62913 178 aaKnown RBP10.52□□□□□ -0.73
SPG7-205ENST00000561945 MLANAQ16655 118 aa10.52□□□□□ -0.73
SPG7-205ENST00000561945 Q6ZRM9 215 aa10.52□□□□□ -0.73
SPG7-205ENST00000561945 FAM219AQ8IW50 185 aa10.52□□□□□ -0.73
SPG7-205ENST00000561945 TERB2Q8NHR7 220 aa10.52□□□□□ -0.73
SPG7-205ENST00000561945 DYNC2LI1Q8TCX1 351 aa10.52□□□□□ -0.73
SPG7-205ENST00000561945 PDCD10Q9BUL8 212 aa10.52□□□□□ -0.73
SPG7-205ENST00000561945 SEPSECSQ9HD40 501 aaKnown RBP10.52□□□□□ -0.73
SPG7-205ENST00000561945 CCDC59Q9P031 241 aaKnown RBP10.52□□□□□ -0.73
SPG7-205ENST00000561945 EXTL2Q9UBQ6 330 aa10.52□□□□□ -0.73
SPG7-205ENST00000561945 RABAC1Q9UI14 185 aa10.52□□□□□ -0.73
SPG7-205ENST00000561945 ELOA3CA0A087WX78 387 aaPredicted RBP10.51□□□□□ -0.73
SPG7-205ENST00000561945 IGLL5B9A064 214 aa10.51□□□□□ -0.73
SPG7-205ENST00000561945 H3BMQ9 156 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms