RNA–Protein interactions for RNA: ENST00000561869.1

CHD9-204, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-204ENST00000561869 TRBV6-5A0A0K0K1A5 114 aa0.61□□□□□ -2.31
CHD9-204ENST00000561869 FAM159BA6NKW6 160 aa0.61□□□□□ -2.31
CHD9-204ENST00000561869 SDCBPO00560 298 aaPredicted RBP0.61□□□□□ -2.31
CHD9-204ENST00000561869 ORC5O43913 435 aa0.61□□□□□ -2.31
CHD9-204ENST00000561869 MRPS14O60783 128 aaKnown RBP0.61□□□□□ -2.31
CHD9-204ENST00000561869 OR2B3O76000 313 aa0.61□□□□□ -2.31
CHD9-204ENST00000561869 PMP2P02689 132 aa0.61□□□□□ -2.31
CHD9-204ENST00000561869 CTSDP07339 412 aaPredicted RBP0.61□□□□□ -2.31
CHD9-204ENST00000561869 RPSAP08865 295 aaKnown RBP0.61□□□□□ -2.31
CHD9-204ENST00000561869 HTR1AP08908 422 aa0.61□□□□□ -2.31
CHD9-204ENST00000561869 PPIBP23284 216 aaKnown RBP0.61□□□□□ -2.31
CHD9-204ENST00000561869 DEFA1P59665 94 aa0.61□□□□□ -2.31
CHD9-204ENST00000561869 KRTAP10-4P60372 401 aaPredicted RBP0.61□□□□□ -2.31
CHD9-204ENST00000561869 ARF6P62330 175 aa0.61□□□□□ -2.31
CHD9-204ENST00000561869 LIN52Q52LA3 116 aa0.61□□□□□ -2.31
CHD9-204ENST00000561869 LINC01554Q52M75 96 aa0.61□□□□□ -2.31
CHD9-204ENST00000561869 LCN15Q6UWW0 184 aa0.61□□□□□ -2.31
CHD9-204ENST00000561869 UNQ6190/PRO20217Q6UXQ8 127 aa0.61□□□□□ -2.31
CHD9-204ENST00000561869 Q6ZQT0 140 aa0.61□□□□□ -2.31
CHD9-204ENST00000561869 FP248Q71RG6 208 aaPredicted RBP0.61□□□□□ -2.31
CHD9-204ENST00000561869 DEFB119Q8N690 84 aa0.61□□□□□ -2.31
CHD9-204ENST00000561869 SIGLECL1Q8N7X8 197 aa0.61□□□□□ -2.31
CHD9-204ENST00000561869 C15orf53Q8NAA6 179 aa0.61□□□□□ -2.31
CHD9-204ENST00000561869 OR11H6Q8NGC7 330 aa0.61□□□□□ -2.31
CHD9-204ENST00000561869 OR52R1Q8NGF1 315 aa0.61□□□□□ -2.31
CHD9-204ENST00000561869 NAA38Q9BRA0 125 aaKnown RBP0.61□□□□□ -2.31
CHD9-204ENST00000561869 TMEM133Q9H2Q1 129 aa0.61□□□□□ -2.31
CHD9-204ENST00000561869 UQCC1Q9NVA1 299 aa0.61□□□□□ -2.31
CHD9-204ENST00000561869 CYSLTR1Q9Y271 337 aa0.61□□□□□ -2.31
CHD9-204ENST00000561869 ERGIC3Q9Y282 383 aa0.61□□□□□ -2.31
CHD9-204ENST00000561869 ARL2BPQ9Y2Y0 163 aa0.61□□□□□ -2.31
CHD9-204ENST00000561869 RP1P56715 2156 aa0.61□□□□□ -2.31
CHD9-204ENST00000561869 MYH11P35749 1972 aa0.61□□□□□ -2.31
CHD9-204ENST00000561869 hCG_1818297A0A087WSY0 165 aa0.6□□□□□ -2.31
CHD9-204ENST00000561869 TRAV4A0A0B4J268 109 aa0.6□□□□□ -2.31
CHD9-204ENST00000561869 A8MT66 165 aa0.6□□□□□ -2.31
CHD9-204ENST00000561869 ATP5HO75947 161 aa0.6□□□□□ -2.31
CHD9-204ENST00000561869 TCL1BO95988 128 aa0.6□□□□□ -2.31
CHD9-204ENST00000561869 SERPINA1P01009 418 aa0.6□□□□□ -2.31
CHD9-204ENST00000561869 RNASE3P12724 160 aaKnown RBP0.6□□□□□ -2.31
CHD9-204ENST00000561869 CASP1P29466 404 aa0.6□□□□□ -2.31
CHD9-204ENST00000561869 MAGEA12P43365 314 aa0.6□□□□□ -2.31
CHD9-204ENST00000561869 EIF2B2P49770 351 aaKnown RBP0.6□□□□□ -2.31
CHD9-204ENST00000561869 MRPS25P82663 173 aaKnown RBP0.6□□□□□ -2.31
CHD9-204ENST00000561869 ZNF846Q147U1 533 aa0.6□□□□□ -2.31
CHD9-204ENST00000561869 SPA17Q15506 151 aa0.6□□□□□ -2.31
CHD9-204ENST00000561869 Q6Q795 121 aa0.6□□□□□ -2.31
CHD9-204ENST00000561869 LCA10Q71F78 164 aa0.6□□□□□ -2.31
CHD9-204ENST00000561869 CLVS1Q8IUQ0 354 aaPredicted RBP0.6□□□□□ -2.31
CHD9-204ENST00000561869 KRT222Q8N1A0 295 aa0.6□□□□□ -2.31
CHD9-204ENST00000561869 HIST3H2BBQ8N257 126 aa0.6□□□□□ -2.31
CHD9-204ENST00000561869 Q8N2B8 174 aa0.6□□□□□ -2.31
CHD9-204ENST00000561869 OR4D11Q8NGI4 311 aa0.6□□□□□ -2.31
CHD9-204ENST00000561869 OR10X1Q8NGY0 326 aa0.6□□□□□ -2.31
CHD9-204ENST00000561869 BTF3L4Q96K17 158 aa0.6□□□□□ -2.31
CHD9-204ENST00000561869 SIGMAR1Q99720 223 aa0.6□□□□□ -2.31
CHD9-204ENST00000561869 MRPL32Q9BYC8 188 aaKnown RBP0.6□□□□□ -2.31
CHD9-204ENST00000561869 CCDC90BQ9GZT6 254 aa0.6□□□□□ -2.31
CHD9-204ENST00000561869 PSTPIP2Q9H939 334 aa0.6□□□□□ -2.31
CHD9-204ENST00000561869 NMNAT1Q9HAN9 279 aaPredicted RBP0.6□□□□□ -2.31
CHD9-204ENST00000561869 SLC39A9Q9NUM3 307 aa0.6□□□□□ -2.31
CHD9-204ENST00000561869 TVP23BQ9NYZ1 205 aa0.6□□□□□ -2.31
CHD9-204ENST00000561869 ARL5AQ9Y689 179 aa0.6□□□□□ -2.31
CHD9-204ENST00000561869 SETD5Q9C0A6 1442 aa0.6□□□□□ -2.31
CHD9-204ENST00000561869 ZNF106Q9H2Y7 1883 aaKnown RBP0.6□□□□□ -2.31
CHD9-204ENST00000561869 INTS1Q8N201 2190 aaKnown RBP0.6□□□□□ -2.31
CHD9-204ENST00000561869 MED13Q9UHV7 2174 aa0.6□□□□□ -2.31
CHD9-204ENST00000561869 EIF3AQ14152 1382 aaKnown RBP0.59□□□□□ -2.31
CHD9-204ENST00000561869 MED1Q15648 1581 aaPredicted RBP0.59□□□□□ -2.31
CHD9-204ENST00000561869 DIDO1Q9BTC0 2240 aaKnown RBP0.59□□□□□ -2.31
CHD9-204ENST00000561869 TRBV19A0A075B6N1 114 aa0.59□□□□□ -2.31
CHD9-204ENST00000561869 IGKV1-9A0A0C4DH69 117 aa0.59□□□□□ -2.31
CHD9-204ENST00000561869 FUOMA2VDF0 154 aa0.59□□□□□ -2.31
CHD9-204ENST00000561869 J3QRK9 145 aa0.59□□□□□ -2.31
CHD9-204ENST00000561869 OR2T1O43869 369 aa0.59□□□□□ -2.31
CHD9-204ENST00000561869 CRPP02741 224 aa0.59□□□□□ -2.31
CHD9-204ENST00000561869 C1QBP02746 253 aa0.59□□□□□ -2.31
CHD9-204ENST00000561869 ARL14EPLP0DKL9 152 aa0.59□□□□□ -2.31
CHD9-204ENST00000561869 CRYGAP11844 174 aa0.59□□□□□ -2.31
CHD9-204ENST00000561869 MIFP14174 115 aa0.59□□□□□ -2.31
CHD9-204ENST00000561869 FKBP2P26885 142 aaKnown RBP0.59□□□□□ -2.31
CHD9-204ENST00000561869 YPEL3P61236 119 aaPredicted RBP0.59□□□□□ -2.31
CHD9-204ENST00000561869 HSPE1P61604 102 aaKnown RBP0.59□□□□□ -2.31
CHD9-204ENST00000561869 TMED2Q15363 201 aa0.59□□□□□ -2.31
CHD9-204ENST00000561869 RHEBQ15382 184 aa0.59□□□□□ -2.31
CHD9-204ENST00000561869 SPANXN5Q5MJ07 72 aa0.59□□□□□ -2.31
CHD9-204ENST00000561869 C10orf55Q5SWW7 151 aa0.59□□□□□ -2.31
CHD9-204ENST00000561869 DHRS4L2Q6PKH6 230 aa0.59□□□□□ -2.31
CHD9-204ENST00000561869 Q6ZSA8 131 aa0.59□□□□□ -2.31
CHD9-204ENST00000561869 AAED1Q7RTV5 226 aa0.59□□□□□ -2.31
CHD9-204ENST00000561869 TRAPPC6BQ86SZ2 158 aa0.59□□□□□ -2.31
CHD9-204ENST00000561869 BPIFA4PQ86YQ2 179 aa0.59□□□□□ -2.31
CHD9-204ENST00000561869 PXT1Q8NFP0 134 aa0.59□□□□□ -2.31
CHD9-204ENST00000561869 OR5A1Q8NGJ0 315 aa0.59□□□□□ -2.31
CHD9-204ENST00000561869 GNPDA2Q8TDQ7 276 aa0.59□□□□□ -2.31
CHD9-204ENST00000561869 GPR146Q96CH1 333 aa0.59□□□□□ -2.31
CHD9-204ENST00000561869 ADAT3Q96EY9 351 aaPredicted RBP0.59□□□□□ -2.31
CHD9-204ENST00000561869 RETNLBQ9BQ08 111 aa0.59□□□□□ -2.31
CHD9-204ENST00000561869 ADAT1Q9BUB4 502 aaKnown RBP0.59□□□□□ -2.31
CHD9-204ENST00000561869 KIFC1Q9BW19 673 aa0.59□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms