RNA–Protein interactions for RNA: ENST00000561517.5

CCDC113-203, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-203ENST00000561517 LGI3Q8N145 548 aa11.59□□□□□ -0.55
CCDC113-203ENST00000561517 OR52B4Q8NGK2 314 aa11.59□□□□□ -0.55
CCDC113-203ENST00000561517 WFDC10AQ9H1F0 79 aa11.59□□□□□ -0.55
CCDC113-203ENST00000561517 ZNF207O43670 478 aaKnown RBP11.58□□□□□ -0.56
CCDC113-203ENST00000561517 TMEM50AO95807 157 aa11.58□□□□□ -0.56
CCDC113-203ENST00000561517 CCR6P51684 374 aa11.58□□□□□ -0.56
CCDC113-203ENST00000561517 C2orf83Q53S99 150 aa11.58□□□□□ -0.56
CCDC113-203ENST00000561517 LYZL2Q7Z4W2 148 aa11.58□□□□□ -0.56
CCDC113-203ENST00000561517 SPAG8Q99932 426 aaPredicted RBP11.58□□□□□ -0.56
CCDC113-203ENST00000561517 SPATA25Q9BR10 227 aa11.58□□□□□ -0.56
CCDC113-203ENST00000561517 SRD5A3Q9H8P0 318 aa11.58□□□□□ -0.56
CCDC113-203ENST00000561517 HEYLQ9NQ87 328 aaPredicted RBP11.58□□□□□ -0.56
CCDC113-203ENST00000561517 NDUFA13Q9P0J0 144 aa11.58□□□□□ -0.56
CCDC113-203ENST00000561517 SMPXQ9UHP9 88 aa11.58□□□□□ -0.56
CCDC113-203ENST00000561517 PIGBOS1A0A0B4J2F0 54 aa11.57□□□□□ -0.56
CCDC113-203ENST00000561517 IGHV7-4-1A0A0J9YVY3 117 aa11.57□□□□□ -0.56
CCDC113-203ENST00000561517 DUXBA0A1W2PPF3 345 aa11.57□□□□□ -0.56
CCDC113-203ENST00000561517 RBMY1BA6NDE4 496 aaKnown RBP11.57□□□□□ -0.56
CCDC113-203ENST00000561517 RBMY1EA6NEQ0 496 aaKnown RBP11.57□□□□□ -0.56
CCDC113-203ENST00000561517 RBMY1DP0C7P1 496 aaKnown RBP11.57□□□□□ -0.56
CCDC113-203ENST00000561517 SMCO1Q147U7 214 aa11.57□□□□□ -0.56
CCDC113-203ENST00000561517 MLANAQ16655 118 aa11.57□□□□□ -0.56
CCDC113-203ENST00000561517 LAMTOR1Q6IAA8 161 aa11.57□□□□□ -0.56
CCDC113-203ENST00000561517 ZNF600Q6ZNG1 722 aa11.57□□□□□ -0.56
CCDC113-203ENST00000561517 TMED4Q7Z7H5 227 aa11.57□□□□□ -0.56
CCDC113-203ENST00000561517 OR4X1Q8NH49 305 aa11.57□□□□□ -0.56
CCDC113-203ENST00000561517 SDHCQ99643 169 aaPredicted RBP11.57□□□□□ -0.56
CCDC113-203ENST00000561517 MRPL36Q9P0J6 103 aaKnown RBP11.57□□□□□ -0.56
CCDC113-203ENST00000561517 CEBPZOSA8MTT3 80 aa11.56□□□□□ -0.56
CCDC113-203ENST00000561517 CHEK1O14757 476 aa11.56□□□□□ -0.56
CCDC113-203ENST00000561517 CLN5O75503 358 aa11.56□□□□□ -0.56
CCDC113-203ENST00000561517 YIF1AO95070 293 aa11.56□□□□□ -0.56
CCDC113-203ENST00000561517 OPRK1P41145 380 aa11.56□□□□□ -0.56
CCDC113-203ENST00000561517 TNFRSF9Q07011 255 aa11.56□□□□□ -0.56
CCDC113-203ENST00000561517 BAK1Q16611 211 aa11.56□□□□□ -0.56
CCDC113-203ENST00000561517 TOMM20LQ6UXN7 152 aa11.56□□□□□ -0.56
CCDC113-203ENST00000561517 LRTM2Q8N967 370 aa11.56□□□□□ -0.56
CCDC113-203ENST00000561517 TMEM116Q8NCL8 245 aa11.56□□□□□ -0.56
CCDC113-203ENST00000561517 SLC24A4Q8NFF2 622 aa11.56□□□□□ -0.56
CCDC113-203ENST00000561517 TMEM170AQ8WVE7 144 aa11.56□□□□□ -0.56
CCDC113-203ENST00000561517 CITED4Q96RK1 184 aa11.56□□□□□ -0.56
CCDC113-203ENST00000561517 RHPN1-AS1Q9BWJ2 59 aa11.56□□□□□ -0.56
CCDC113-203ENST00000561517 HSPB7Q9UBY9 170 aa11.56□□□□□ -0.56
CCDC113-203ENST00000561517 TRAV14DV4A0A0A6YYC5 116 aa11.55□□□□□ -0.56
CCDC113-203ENST00000561517 A0A1B0GU03 582 aa11.55□□□□□ -0.56
CCDC113-203ENST00000561517 RPS10-NUDT3A0A1W2PQS6 291 aa11.55□□□□□ -0.56
CCDC113-203ENST00000561517 RBMS2Q15434 407 aaKnown RBP11.55□□□□□ -0.56
CCDC113-203ENST00000561517 RNASEH2CQ8TDP1 164 aaKnown RBP11.55□□□□□ -0.56
CCDC113-203ENST00000561517 RNF2Q99496 336 aa11.55□□□□□ -0.56
CCDC113-203ENST00000561517 GINS3Q9BRX5 216 aa11.55□□□□□ -0.56
CCDC113-203ENST00000561517 HIPK2Q9H2X6 1198 aa11.55□□□□□ -0.56
CCDC113-203ENST00000561517 ZFAND3Q9H8U3 227 aa11.55□□□□□ -0.56
CCDC113-203ENST00000561517 PUS1Q9Y606 427 aaKnown RBP eCLIP11.55□□□□□ -0.56
CCDC113-203ENST00000561517 NAP1L6A6NFF2 107 aa11.54□□□□□ -0.56
CCDC113-203ENST00000561517 C3orf84H3BNL1 204 aa11.54□□□□□ -0.56
CCDC113-203ENST00000561517 PITX3O75364 302 aa11.54□□□□□ -0.56
CCDC113-203ENST00000561517 NXPH3O95157 252 aa11.54□□□□□ -0.56
CCDC113-203ENST00000561517 SFT2D2O95562 160 aa11.54□□□□□ -0.56
CCDC113-203ENST00000561517 IGKV1-17P01599 117 aa11.54□□□□□ -0.56
CCDC113-203ENST00000561517 VAMP1P23763 118 aa11.54□□□□□ -0.56
CCDC113-203ENST00000561517 NPY1RP25929 384 aa11.54□□□□□ -0.56
CCDC113-203ENST00000561517 PPP1R1AQ13522 171 aa11.54□□□□□ -0.56
CCDC113-203ENST00000561517 TRIQKQ629K1 86 aa11.54□□□□□ -0.56
CCDC113-203ENST00000561517 NOXA1Q86UR1 476 aa11.54□□□□□ -0.56
CCDC113-203ENST00000561517 CENPSQ8N2Z9 138 aa11.54□□□□□ -0.56
CCDC113-203ENST00000561517 FAM110AQ9BQ89 295 aa11.54□□□□□ -0.56
CCDC113-203ENST00000561517 DNAH7Q8WXX0 4024 aa11.53□□□□□ -0.56
CCDC113-203ENST00000561517 TRAV30A0A087WSZ9 112 aa11.53□□□□□ -0.56
CCDC113-203ENST00000561517 IGHV3-49A0A0A0MS15 119 aa11.53□□□□□ -0.56
CCDC113-203ENST00000561517 SLC25A4P12235 298 aa11.53□□□□□ -0.56
CCDC113-203ENST00000561517 SLC25A6P12236 298 aa11.53□□□□□ -0.56
CCDC113-203ENST00000561517 INPP1P49441 399 aa11.53□□□□□ -0.56
CCDC113-203ENST00000561517 UBE2MP61081 183 aaKnown RBP11.53□□□□□ -0.56
CCDC113-203ENST00000561517 FAM90A2PQ658T7 463 aa11.53□□□□□ -0.56
CCDC113-203ENST00000561517 PRSS54Q6PEW0 395 aa11.53□□□□□ -0.56
CCDC113-203ENST00000561517 DTD1Q8TEA8 209 aa11.53□□□□□ -0.56
CCDC113-203ENST00000561517 RBKSQ9H477 322 aa11.53□□□□□ -0.56
CCDC113-203ENST00000561517 VSIRQ9H7M9 311 aa11.53□□□□□ -0.56
CCDC113-203ENST00000561517 U3KQ87 197 aa11.53□□□□□ -0.56
CCDC113-203ENST00000561517 OR4C46A6NHA9 309 aa11.52□□□□□ -0.57
CCDC113-203ENST00000561517 SCGB2A1O75556 95 aa11.52□□□□□ -0.57
CCDC113-203ENST00000561517 NDUFB6O95139 128 aa11.52□□□□□ -0.57
CCDC113-203ENST00000561517 IGLC1P0CG04 106 aa11.52□□□□□ -0.57
CCDC113-203ENST00000561517 BMI1P35226 326 aa11.52□□□□□ -0.57
CCDC113-203ENST00000561517 ODF3L2Q3SX64 289 aa11.52□□□□□ -0.57
CCDC113-203ENST00000561517 ETFRF1Q6IPR1 90 aa11.52□□□□□ -0.57
CCDC113-203ENST00000561517 OR1S1Q8NH92 325 aa11.52□□□□□ -0.57
CCDC113-203ENST00000561517 MUC7Q8TAX7 377 aa11.52□□□□□ -0.57
CCDC113-203ENST00000561517 EDA2RQ9HAV5 297 aa11.52□□□□□ -0.57
CCDC113-203ENST00000561517 TMED3Q9Y3Q3 217 aa11.52□□□□□ -0.57
CCDC113-203ENST00000561517 IGHV3OR16-13A0A075B7E8 117 aa11.51□□□□□ -0.57
CCDC113-203ENST00000561517 IGHV3-74A0A0B4J1X5 117 aa11.51□□□□□ -0.57
CCDC113-203ENST00000561517 IFNA10P01566 189 aa11.51□□□□□ -0.57
CCDC113-203ENST00000561517 APOHP02749 345 aaPredicted RBP11.51□□□□□ -0.57
CCDC113-203ENST00000561517 CD5P06127 495 aa11.51□□□□□ -0.57
CCDC113-203ENST00000561517 RND2P52198 227 aa11.51□□□□□ -0.57
CCDC113-203ENST00000561517 ATP5IP56385 69 aaPredicted RBP11.51□□□□□ -0.57
CCDC113-203ENST00000561517 TIGITQ495A1 244 aa11.51□□□□□ -0.57
CCDC113-203ENST00000561517 OR1S2Q8NGQ3 325 aa11.51□□□□□ -0.57
CCDC113-203ENST00000561517 ST8SIA2Q92186 375 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms