RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 CNIH1O95406 144 aa2.31□□□□□ -2.04
HERC1-215ENST00000561436 HPRT1P00492 218 aa2.31□□□□□ -2.04
HERC1-215ENST00000561436 IGLV1-51P01701 117 aa2.31□□□□□ -2.04
HERC1-215ENST00000561436 UBCP0CG48 685 aaKnown RBP2.31□□□□□ -2.04
HERC1-215ENST00000561436 STAG3L3P0CL85 134 aa2.31□□□□□ -2.04
HERC1-215ENST00000561436 SPNP16150 400 aa2.31□□□□□ -2.04
HERC1-215ENST00000561436 CNTFRP26992 372 aa2.31□□□□□ -2.04
HERC1-215ENST00000561436 PYCR1P32322 319 aa2.31□□□□□ -2.04
HERC1-215ENST00000561436 MAGEA2P43356 314 aa2.31□□□□□ -2.04
HERC1-215ENST00000561436 RBP2P50120 134 aa2.31□□□□□ -2.04
HERC1-215ENST00000561436 NUDT2P50583 147 aa2.31□□□□□ -2.04
HERC1-215ENST00000561436 ZNF137PP52743 207 aa2.31□□□□□ -2.04
HERC1-215ENST00000561436 RAB25P57735 213 aa2.31□□□□□ -2.04
HERC1-215ENST00000561436 PITPNAQ00169 270 aa2.31□□□□□ -2.04
HERC1-215ENST00000561436 PRB3Q04118 309 aaPredicted RBP2.31□□□□□ -2.04
HERC1-215ENST00000561436 TMEM267Q0VDI3 215 aaPredicted RBP2.31□□□□□ -2.04
HERC1-215ENST00000561436 TMED1Q13445 227 aa2.31□□□□□ -2.04
HERC1-215ENST00000561436 ZNF660Q6AZW8 331 aaPredicted RBP2.31□□□□□ -2.04
HERC1-215ENST00000561436 ELP2Q6IA86 826 aa2.31□□□□□ -2.04
HERC1-215ENST00000561436 CD200R1LQ6Q8B3 271 aa2.31□□□□□ -2.04
HERC1-215ENST00000561436 LINC00322Q6ZN03 302 aaPredicted RBP2.31□□□□□ -2.04
HERC1-215ENST00000561436 LINC00336Q6ZUF6 198 aa2.31□□□□□ -2.04
HERC1-215ENST00000561436 TCF23Q7RTU1 214 aa2.31□□□□□ -2.04
HERC1-215ENST00000561436 TRAPPC6BQ86SZ2 158 aa2.31□□□□□ -2.04
HERC1-215ENST00000561436 FAM58AQ8N1B3 248 aa2.31□□□□□ -2.04
HERC1-215ENST00000561436 Q8N402 240 aa2.31□□□□□ -2.04
HERC1-215ENST00000561436 OR10G2Q8NGC3 310 aa2.31□□□□□ -2.04
HERC1-215ENST00000561436 OR6K6Q8NGW6 343 aa2.31□□□□□ -2.04
HERC1-215ENST00000561436 OR6N2Q8NGY6 317 aa2.31□□□□□ -2.04
HERC1-215ENST00000561436 THEM6Q8WUY1 208 aa2.31□□□□□ -2.04
HERC1-215ENST00000561436 BORCS8Q96FH0 119 aa2.31□□□□□ -2.04
HERC1-215ENST00000561436 OPALINQ96PE5 141 aa2.31□□□□□ -2.04
HERC1-215ENST00000561436 TEAD3Q99594 435 aa2.31□□□□□ -2.04
HERC1-215ENST00000561436 TIMM17AQ99595 171 aa2.31□□□□□ -2.04
HERC1-215ENST00000561436 HSD17B10Q99714 261 aaKnown RBP2.31□□□□□ -2.04
HERC1-215ENST00000561436 RNF5Q99942 180 aa2.31□□□□□ -2.04
HERC1-215ENST00000561436 TSSK6Q9BXA6 273 aa2.31□□□□□ -2.04
HERC1-215ENST00000561436 KRTAP4-3Q9BYR4 195 aa2.31□□□□□ -2.04
HERC1-215ENST00000561436 PRRG3Q9BZD7 231 aa2.31□□□□□ -2.04
HERC1-215ENST00000561436 CHST5Q9GZS9 411 aa2.31□□□□□ -2.04
HERC1-215ENST00000561436 EXOSC4Q9NPD3 245 aaKnown RBP2.31□□□□□ -2.04
HERC1-215ENST00000561436 GPR84Q9NQS5 396 aa2.31□□□□□ -2.04
HERC1-215ENST00000561436 CYTL1Q9NRR1 136 aa2.31□□□□□ -2.04
HERC1-215ENST00000561436 TP53TG1Q9Y2A0 90 aa2.31□□□□□ -2.04
HERC1-215ENST00000561436 KLK5Q9Y337 293 aaPredicted RBP2.31□□□□□ -2.04
HERC1-215ENST00000561436 LRRC42Q9Y546 428 aa2.31□□□□□ -2.04
HERC1-215ENST00000561436 R4GMQ9 66 aa2.31□□□□□ -2.04
HERC1-215ENST00000561436 EXPH5Q8NEV8 1989 aa2.3□□□□□ -2.04
HERC1-215ENST00000561436 MALRD1Q5VYJ5 2156 aa2.3□□□□□ -2.04
HERC1-215ENST00000561436 TRAV6A0A075B6T7 132 aa2.3□□□□□ -2.04
HERC1-215ENST00000561436 TRAV25A0A0B4J276 109 aa2.3□□□□□ -2.04
HERC1-215ENST00000561436 IGHV1-3A0A0C4DH29 117 aa2.3□□□□□ -2.04
HERC1-215ENST00000561436 A0A0G2JND7 137 aa2.3□□□□□ -2.04
HERC1-215ENST00000561436 A0A1B0GVX0 72 aa2.3□□□□□ -2.04
HERC1-215ENST00000561436 TMEM223A0PJW6 202 aa2.3□□□□□ -2.04
HERC1-215ENST00000561436 FAM183AA6NL82 134 aa2.3□□□□□ -2.04
HERC1-215ENST00000561436 NCBP2LA6PVI3 153 aaKnown RBP2.3□□□□□ -2.04
HERC1-215ENST00000561436 L7N2F9 121 aa2.3□□□□□ -2.04
HERC1-215ENST00000561436 TNFRSF11BO00300 401 aa2.3□□□□□ -2.04
HERC1-215ENST00000561436 DEGS1O15121 323 aa2.3□□□□□ -2.04
HERC1-215ENST00000561436 ORC5O43913 435 aa2.3□□□□□ -2.04
HERC1-215ENST00000561436 ENTPD6O75354 484 aa2.3□□□□□ -2.04
HERC1-215ENST00000561436 HSBP1O75506 76 aa2.3□□□□□ -2.04
HERC1-215ENST00000561436 OR2H2O95918 312 aa2.3□□□□□ -2.04
HERC1-215ENST00000561436 IGKV1D-33P01593 117 aa2.3□□□□□ -2.04
HERC1-215ENST00000561436 IGKV1-33P01594 117 aa2.3□□□□□ -2.04
HERC1-215ENST00000561436 HLA-DRB1P01911 266 aa2.3□□□□□ -2.04
HERC1-215ENST00000561436 TTRP02766 147 aa2.3□□□□□ -2.04
HERC1-215ENST00000561436 ISG15P05161 165 aa2.3□□□□□ -2.04
HERC1-215ENST00000561436 GLAP06280 429 aa2.3□□□□□ -2.04
HERC1-215ENST00000561436 LGALS1P09382 135 aaKnown RBP2.3□□□□□ -2.04
HERC1-215ENST00000561436 TLX1NBP0CAT3 122 aa2.3□□□□□ -2.04
HERC1-215ENST00000561436 PSKH1P11801 424 aa2.3□□□□□ -2.04
HERC1-215ENST00000561436 PIPP12273 146 aaPredicted RBP2.3□□□□□ -2.04
HERC1-215ENST00000561436 IGFBP3P17936 291 aaPredicted RBP2.3□□□□□ -2.04
HERC1-215ENST00000561436 RPS27P42677 84 aaKnown RBP2.3□□□□□ -2.04
HERC1-215ENST00000561436 SYNJ2BPP57105 145 aa2.3□□□□□ -2.04
HERC1-215ENST00000561436 HES1Q14469 280 aa2.3□□□□□ -2.04
HERC1-215ENST00000561436 EDDM3AQ14507 147 aa2.3□□□□□ -2.04
HERC1-215ENST00000561436 AKIRIN2Q53H80 203 aa2.3□□□□□ -2.04
HERC1-215ENST00000561436 BCL2L15Q5TBC7 163 aa2.3□□□□□ -2.04
HERC1-215ENST00000561436 LGALS9CQ6DKI2 356 aa2.3□□□□□ -2.04
HERC1-215ENST00000561436 ZFAND6Q6FIF0 208 aa2.3□□□□□ -2.04
HERC1-215ENST00000561436 C10orf99Q6UWK7 81 aa2.3□□□□□ -2.04
HERC1-215ENST00000561436 SLC25A26Q70HW3 274 aa2.3□□□□□ -2.04
HERC1-215ENST00000561436 LINC00596Q86U02 117 aa2.3□□□□□ -2.04
HERC1-215ENST00000561436 APRG1Q8IVJ8 170 aa2.3□□□□□ -2.04
HERC1-215ENST00000561436 H1FOOQ8IZA3 346 aaPredicted RBP2.3□□□□□ -2.04
HERC1-215ENST00000561436 YIPF7Q8N8F6 280 aa2.3□□□□□ -2.04
HERC1-215ENST00000561436 INO80EQ8NBZ0 244 aaPredicted RBP2.3□□□□□ -2.04
HERC1-215ENST00000561436 TMEM104Q8NE00 496 aa2.3□□□□□ -2.04
HERC1-215ENST00000561436 OR11H7Q8NGC8 314 aa2.3□□□□□ -2.04
HERC1-215ENST00000561436 OR51T1Q8NGJ9 327 aa2.3□□□□□ -2.04
HERC1-215ENST00000561436 OR10X1Q8NGY0 326 aa2.3□□□□□ -2.04
HERC1-215ENST00000561436 TEX47Q8TBZ9 253 aa2.3□□□□□ -2.04
HERC1-215ENST00000561436 GLYATL2Q8WU03 294 aa2.3□□□□□ -2.04
HERC1-215ENST00000561436 ATP6V1G3Q96LB4 118 aa2.3□□□□□ -2.04
HERC1-215ENST00000561436 KCTD7Q96MP8 289 aa2.3□□□□□ -2.04
HERC1-215ENST00000561436 TOLLIPQ9H0E2 274 aa2.3□□□□□ -2.04
HERC1-215ENST00000561436 TUBA4BQ9H853 241 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms